LOC122357044


Basic Information

Item Value
gene id LOC122357044
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24652927 ~ 24664925 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU142568
CCCAGAGTGGGTGACAGCTTTACAGAGCGCTCAGACGACGACGGAGTCAAGCAGCCCCCCTTCTTACAGTTGCCATCTTACAAAGCTTTATTATAGGCTCTTAACACCGTGTCCACACTTGCAAAAGAGCGACACGGCGCTACAAAACTTCAAGCTAATCAGTATAACAGCAGTCGATTATAACGGTCGCTTTCTATTTTTGTCGCGTCGCGTGAGATTATTACGTAATTACGCACTTGTGGCGGTTCCCAAGAGCGTATACAAATATATAGATATCGCGCGTGTTCGCTTCGACCAGTAACTTTAAATCGCGCGACTTTCGTTAAGTTGAAATACATTACAAAGTTACCGATGACACGGCAAGTATCAGTCGGAGTGGAGAAGGCATCCTTTCTGGACATCTATACATTTTCTCACAAAGTATATTTCTGCTGTCAGCGCTGGAGGAAACGTCACGGGCGTGCACGCGAAGAAGTTTCAAAAGAAAGTTCGTCGGGCGGATCTTTCTTAGAAATGCATACTGATTGTAACTTAGGCTGGCACCAAGTCTGATGACTTTTCCCAGAAGATTCAGTCGAGACATAGAGAGAGGGGGCAGAAAGAGAGCTTTCTTGTCCAATAGGAGGCAAGGGGGCTGAAGAATGTGAAAAGCTCCCATTCAGGCCGGTTCACAGGGGCTGGGAGCGGCCACATCCTCAGGAGGGAGGAGGGGTTGCTGCTTTCAGGAGGGTGGGCTAGGGATCCTGGACAGGGGCCAGGAGCGATGCAGAGGCTCCTCGGATGACGCTGGTCCGTGGGAGCGTCCAGTGCCTCCGCCTCTCCTCTGTCCCTTAGGACACAGACTCTGGACCCCTTGCTTTCTATTTACTCGCACAAACAACCTCTCCCCACAGTCCTTCTACCCTCAGAGCAGAAGCAGCCAGTAGGCTGCAGGATGAGGAATGCGTCTCTATTAATAGAGCAGTTAGATTATCTCGAAGACTAATGACTGGCATGTCCAGATTCTTGAAAGTCATGGTAGTGACGTACTTTCATCCACCGGTCTTCATGATCTCATTTCTTATGATATTTTCTGAACGTAGTGGCtctctttttaaaacagtttatattCTACTTGCACAGTTTTATTCTCACTTATagttaataaaagcatttaaagcgACTGCAAAAAAAACGGTCTTGTTTACAGCTAAAATATCTAGAACTTAAATCAAGTAAaaattttgacttgttttcagaaaaaaactaataaaattgaAGCAAATTTTTCCtcagaaaaagctaaataattgtattttaaagatgatAATTTTTACTTACCCTGTTGGCAGATTATGTTTcttgtttcaagtaaaaacattgcattttgatttgttattttctgaaaacaaaaccgtaatgtttatttgtgtagAAAATCTTCCTTGActtaagaatataaataaaataaaaaaaaaaaaattatctggaAAAAATCTTGCTTGCAGTGATTTCAAATGCAAGTAaatacagaagtaaaaaaaaaaaattaaatgtttttacttatttatgttttat
>XR_006252418.1
TGAGGAATCCGCATAGAAAAAGTCAGGAGTGACAGATCGCCCAGAGTGGGTGACAGCTTTACAGAGCGCTCAGACGACGACGGAGTCAAGCAGCCCCCCTTCTTACAGTTGCCATCTTACAAAGCTTTATTATAGGCTCTTAACACCGTGTCCACACTTGCAAAAGAGCGACACGGCGCTACAAAACTTCAAGCTAATCAGTATAACAGCAGTCGATTATAACGGTCGCTTTCTATTTTTGTCGCGTCGCGTGAGATTATTACGTAATTACGCACTTGTGGCGGTTCCCAAGAGCGTATACAAATATATAGATATCGCGCGTGTTCGCTTCGACCAGTAACTTTAAATCGCGCGACTTTCGTTAAGTTGAAATACATTACAAAGTTACCGATGACACGGCAAGTATCAGTCGGAGTGGAGAAGGCATCCTTTCTGGACATCTATACATTTTCTCACAAAGTATATTTCTGCTGTCAGCGCTGGAGGAAACGTCACGGGCGTGCACGCGAAGAAGTTTCAAAAGAAAGTTCGTCGGGCGGATCTTTCTTAGAAATGCATACTGATTGTAACTTAGGCTGGCACCAAGTCTGATGACTTTTCCCAGAAGATTCAGTCGAGACATAGAGAGAGGGGGCAGAAAGAGAGCTTTCTTGTCCAATAGGAGGCAAGGGGGCTGAAGAATGTGAAAAGCTCCCATTCAGGCCGGTTCACAGGGGCTGGGAGCGGCCACATCCTCAGGAGGGAGGAGGGGTTGCTGCTTTCAGGAGGGTGGGCTAGGGATCCTGGACAGGGGCCAGGAGCGATGCAGAGGCTCCTCGGATGACGCTGGTCCGTGGGAGCGTCCAGTGCCTCCGCCTCTCCTCTGTCCCTTAGGACACAGACTCTGGACCCCTTGCTTTCTATTTACTCGCACAAACAACCTCTCCCCACAGTCCTTCTACCCTCAGAGCAGAAGCAGCCAGTAGGCTGCAGGATGAGGAATGCGTCTCTATTAATAGAGCAGTTAGATTATCTCGAAGACTAATGACTGGCATGTCCAGATTCTTGAAAGTCATGGTAGTGACGTACTTTCATCCACCGGTCTTCATGATCTCATTTCTTATGATATTTTCTGAACGTAGTGGCtctctttttaaaacagtttatattCTACTTGCACAGTTTTATTCTCACTTATagttaataaaagcatttaaagcgACTGCAAAAAAAACGGTCTTGTTTACAGCTAAAATATCTAGAACTTAAATCAAGTAAaaattttgacttgttttcagaaaaaaactaataaaattgaAGCAAATTTTTCCtcagaaaaagctaaataattgtattttaaagatgatAATTTTTACTTACCCTGTTGGCAGATTATGTTTcttgtttcaagtaaaaacattgcattttgatttgttattttctgaaaacaaaaccgtaatgtttatttgtgtagAAAATCTTCCTTGActtaagaatataaataaaataaaaaaaaaaaaattatctggaAAAAATCTTGCTTGCAGTGATTTCAAATGCAAGTAaatacagaagtaaaaaaaaaaaattaaatgtttttacttatttatgttttatttatttaaaaataccagTTAGCACATTTAGTCaaactagaaataaaaaaaggtaaactcaaaactaaataaaactttaaaaacaaaaccatgtttaaaaacattaaaactaagaactaaaataaataggGGGGAAAAAACTCAATTCTAAATAATAGCCTGCTTAAGCaaagtgtttgtatttgtattaattgtaaTGCGATATTCGGGTATTCTTGGGTCAAGAAGTTCTTTCCTAAGCCATGGCCAGATCTGACTTGTGAGCCTATATGAGCTTCAGGGAGTGTAAACATCCTACACTCTCAGCTGGAGCCCAGCCTGAGGCCGGGAGTGGGATGTTTGCGCTCTCTGGCTCAGGAACGCCACTCTCACTGCGGCTGCGCTACGGAGGGGAGCAGCTTATTCAGAAAAAGTCGTCTAGATGTTCTAATCATCTACTGAGTAGACGGTAGACCTGAAATTACACCTGACCGCTTTGTTGGAACGTACACTGGAACTAGTCACCGGGGTAGGTAGCGATCACCTAACTATCTTTCTAAACGTATGTTCACTGTGTGAAAAGTATGTTAAAAAGCTCAGGATAAAAGAAGACGGCTACTTCCTGGACCTTGTGGATAGATTTGGAAGTGGATACGAGAGCTTTGTAACGCACACAGGAAGTGAACTCCATTGTGAGCTTGGAAAGGGCTCTGAGGGTGAGTGGCCTGTCATTAAGCTGCTCAGGGCAGACTGAACTCTAGGTCTCTTTGAAGCTTTCTGACCCCACAGGGTGGGACAACGTTGTTAAACTGCAAGCGCCCCCACCCAGACAGAGCTGCCGATGGAATTGCCTGAGAGGAAGTGACTATTTATACCCGCTAAGGAACAGAGAGGCACCCTTCCGATGGGCGTCTCTCCACTTGCTTCCTTTGACAAATACGTTAGGACTGCTCTCATGAAAGCTAACCCTAACTCCACAAAGACATGCACAACATCCAGTGCTCTCAATGGTATTTGTGTACACGCCTAACCGTGTTTTGGTTACCATTCTCTCCTGCAATGACCTTTACCCACTTTTGCTTGGTGATGTCATAGCTCAAGCATCTCTTATATGTGGCCACTAGGTGGAAGACTAGCTCCAGGAAATTCCTACTAGCTGAAAGACTGCTTGGGAAGCAAGTACACAAAAATTTCAATTATCCACTACAAAATTTTAAGCATCTTCTTATTAAGTATGTGCCTCCAATTCAACAACAccaaaccagaaaaaaaaattatatatatatatatatatatatatatatatatatatatatatatatatatatatataaaacaatcctgtaattatttttttaaatatatattttgctggtatttactttttttttctttcacaataTCTATGTGCAAAAGTAATCTCTGTTGTACTTTGCCTAAAACCAAAGTGAAAAGAGTTCAGTCACATTTTCACCTCAAAGTGCGTCTCCCTGCTCTGTGTTGGAAATTAAAAAACAGAGACGTTTCAGTCAACTGACAGCCTCTGCTCAAGCTTTTCCCGTCAACTGGAACAATCAAAACTGAAGTATGACAACAAAAGCATCACTCATCATTAGTTTGACTATTTTCCTTCTTTGAACTGACTAATTCTTCTTATAATGCCTTATAAGGCCTTTTCATCTAACTGCATGAGAGCTACTGAATTTACACCAAGTTCCtttcaaatgtttcaaacaATAATCTTGCCCCACAGGTGGCACAGCAACAGGAAGAAAGAAATTGGTATGTATGTGCGTTATGTGTAAAGTAAAAACATCAGGAGATTGTTCTGTGAATGTTGTTTCTTCTTTGCTTAATAAACCATAAACAGATGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142568 False 1557 lncRNA 0.41 2 24654781 24664886
XR_006252418.1 True 3450 lncRNA 0.40 2 24652927 24664925

Neighbor

gene id symbol gene type direction distance location
b3gat2 b3gat2,LOC107718837,LOC107694338,LOC107673925,LOC107588666,LOC107585329,LOC107716319 coding downstream 32494 24603688 ~ 24620433 (-)
slc2a15a slc2a15a,LOC107716293,LOC107673883,LOC107708408,LOC107696166,LOC107585370,LOC107588743,LOC108442702 coding downstream 211594 24430020 ~ 24441333 (-)
fbxw4 fbxw4,LOC107707737,LOC107716323,LOC107673945,LOC107694796,LOC107588663,LOC107585327 coding downstream 259040 24367927 ~ 24393887 (-)
wbp1la LOC107694985,LOC107716324,LOC107585326,LOC107673922,LOC107588740,LOC107708389 coding downstream 291631 24350847 ~ 24361296 (-)
cnnm2a cnnm2a,LOC107716327,LOC107588659,LOC107673921,LOC107585325 coding downstream 311475 24327865 ~ 24341452 (-)
asrgl1 asrgl1,LOC107695955,LOC107585330,LOC107673965,LOC105911569,LOC103032358,LOC108442615 coding upstream 2380 24667305 ~ 24672334 (-)
cgasa NA coding upstream 177345 24842270 ~ 24845635 (-)
eef1a1a eef1a1a,LOC107693767,LOC107716315,LOC107588677,LOC107718831,LOC107673933,LOC108258313,LOC107585334 coding upstream 181524 24846449 ~ 24851300 (-)
slc17a5 slc17a5,LOC107588676,LOC107673875,LOC107585335,LOC107693696,LOC107718830 coding upstream 186478 24851403 ~ 24856234 (-)
rin2a LOC107585336,LOC107716314,LOC107588678,LOC107718829 coding upstream 192294 24857219 ~ 24887322 (-)
G96411 NA non-coding downstream 46551 24606130 ~ 24606376 (-)
G96329 NA non-coding downstream 370310 24274695 ~ 24282617 (-)
G96303 NA non-coding downstream 388010 24264668 ~ 24264917 (-)
G96301 NA non-coding downstream 402172 24250433 ~ 24250755 (-)
G96295 NA non-coding downstream 545109 24107433 ~ 24107818 (-)
G96435 rims1,LOC107588670,LOC107718836 non-coding upstream 45819 24710744 ~ 24713458 (-)
G96436 NA non-coding upstream 49294 24714219 ~ 24716962 (-)
fgf8a fgf8a,LOC107673879,LOC107585369,LOC107696243,LOC107588741,LOC107716294 other downstream 248212 24399123 ~ 24404715 (-)
borcs7 borcs7,LOC107695248,LOC107585367,LOC107588662,LOC107716326 other downstream 308270 24342749 ~ 24344657 (-)
si:ch211-130h14.4 LOC107660236 other downstream 1208864 23429646 ~ 23444063 (-)
G96053 NA other downstream 1657328 22994037 ~ 22995599 (-)
G96036 mios,LOC107688218,LOC107592123,LOC107592481,LOC107671474 other downstream 1829668 22821981 ~ 22823259 (-)

Expression


Co-expression Network