ogdhl (ogdhl,LOC107683740,LOC107707496,LOC108442924,LOC108263326)


Basic Information

Item Value
gene id ogdhl
gene name ogdhl,LOC107683740,LOC107707496,LOC108442924,LOC108263326
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 10613939 ~ 10633243 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254516.1
gTTTAGAGCAAAGTGACCGACTGCAGTTCCGCGTTCAGCGCGTGCAGGCGGATTACGGGACGGATTGACGTCGGAGAGATTATAGGACAGAGAAAACAAACTCCAGCCTGAATCGAACGACAGACCGCGTTTGACCTCGAGCGGGACCGTCTTCATCTGCCTGCAGTCAAgTTTTTCAGACATGAGTCAGCTGAGGTCCCTGGCTGGTGCTCTAAGAAGCAGCAGCCAATGGATGAGGGGGCACGTGGGGACAGGGAGGCGAGTTTTTGACCCACGTCGTAACTGTTCGAGCGGGGCTGCCGAGCCCTCATTGGCGGCCTGCAGCTCCAGCTATGTCGTGGAGATGTACTACGCTTGGCTGGAGGATCACAAAAATGTTCATGAGTCTTGGGATGCGTACTTTCGTAATGCCCAAGCCAGCAGTTCAGAGGAGACTGGAGAGAAGCGTCTGTCTGCGCTGCTTCAGGGCCGAGCCATGTCCCAGACACCTGCCATGTCAGAGAAGGTGGTGGAGGATCATTTGGCAGTCCACACTCTTATAAGAGCCTATCAGGTACGCGGTCACCATGTGGCCAGGCTGGACCCTCTTGGCATTCTCACTGCCGATCTGGATTCCTTCGTTCCCTCAGATTTAATCACATCGATTGACAAGCTTGGATCCTATGGCTTGGAAGAATCTGATCTGGATAAATCATTTCAGTTGCCACTAACCACATTTATTGGGGGAAATGAAAGCACACTCCCACTGAGAGAAATCATACACAGACTTGAGACATCATACTGTGGTCATACCGGAGTGGAATTCATGTTCATCAACAATATGGAGCAGTGCCAGTGGATCCGCCAGAAGTTTGAAACTCCAGGAATCATGACGTTTTCCCACGGAGAGAAGAGGACTTTGCTGGCCAGGCTGGTTCGCTCAACACGGTTTGAGGATTTTCTTGCTCGCAAATGGTCTTCAGAGAAACGCTTTGGTTTGGAAGGCTGTGAGGTTCTCATCCCTGCCCTGAAGATGATCATTGACAAATCCAGTGAAGCTGGTATAGAAAGTGTAATTATGGGAATGCCTCACAGAGGCCGACTAAACGTCCTGGCCAATGTAGTTCGCAAAGATCTGGATCAGATATTCTGTCAGTTCGATCCCAAACTTGAGGCTGCAGATGAGGGTTCAGGAGATGTGAAATATCACTTGGGGATGTACCATGAGCGGATAAACAGGGAAACAGATAAGAATATCACATTGTCTCTGATGGCAAACCCCTCTCATCTAGAGGCAGTAGATCCTGTCGTTCAGGGCAAGACCAAGGCAGAGCAGTTTTACAGAGGAGACACTGAAGGAAAGCGGGTGATGTCTATTTTAATGCATGGTGACGCTGCTTTTGCTGGTCAGGGAGTTGTCTACGAAACCTTCCATCTCAGTGAACTGCCTTCATATACCACTCATGGCACCATCCATGTTGTGGTCAATAATCAGattggattcaCCACAGATCCCCGAATGGCGCGTTCCTCTCCCTACCCAACGGATGTGGCTCGAGTAGTCAACGCACCCATCTTCCATGTCAACGCTGATGACCCAGAGGCTGTGATGTATGTTTGTAAGGTTGCTTCAGAATGGAGAAATACTTTCAACAAGGATGTTGTGATAGACCTGGTGTGTTACCGGCGGTTTGGACATAATGAGATGGATGAACCCATGTTCACTCAACCCCTCATGTACAAGCAGATCCGCAAACAGGAACATGTGCTGAAGAAGTACGCCGACAAACTCATCTCTGAGGGAGTTGTAACACTGCAAGAGTTTGAGGAGGAAGTTGCTAAATATGACAAGATCTGTGAGGAGGCGTACACCAGCTCCAAAGATGAGAAGATCCTACACATCCGCCACTGGCTTGACTCTCCATGGCCAGaCTTCTTTAAACCAGATGGAGAGCCAAAGAGCATGAGCTGTCCTTTCACTGGACTAAATGAAGAGGTGCTCAAGCACATTGGCGAGCTAGCCAGTTCAGTCCCTCTGAAGGATTTTGCAATTCACAGCGGCTTGTCACGTATCCTTCGAGGCAGAGCAGATATGGTTGTGAAGCGAACGGTGGACTGGGCTCTGGCAGAGTACTTGGCCTTCGGCTCTTTGCTGAAGGATGGCATTCACGTGAGACTCAGTGGACAAGATGTGGAAAGAGGAACATTTAGTCACCGTCACCACGTCTTGCACGATCAGGAAGTTGATAAGCGCTTCTGTATTCCAATGAACCACCTGTGGCCGAACCAGGCTCTCTACACAGTGTGCAACAGCTCCCTGTCTGAATATGGAGTTTTGGGGTTTGAGCTGGGTTTTGCCATGGCTAGTCCTAATGCCCTGGTTTGCTGGGAGGCTCAGTTTGGTGACTTTCAAAACACTGCCCAGTGCATCATAGACCAGTTCATCACTGCAGGCCAGGCCAAGTGGGTCCGCCACAATGGCATCGTTTTACTGTTGCCTCATGGGATGGAGGGAATGGGCCCGGAGCACTCGTCAGCACGGCCCGAGCGCTTCCTGCAGATGAGCAAGGACGACCCTGATCGCTATCCGGAATTCACTGGAGACTTTGAGGTCCAGCAGCTCTATGACTGTAATTGGATCGTGGTCAATTGCTCAACACCTGCCAACTACTTCCATGTGCTTAGAAGGCAAATCTTATTACCATTCAGAAAGCCACTGATCATTTTCTCACCAAAGTCTTTACTGAGGTTGCCCGAGGCACGCTCCAGCTTCGATGAGATGATCACAGGGACAAAATTCCTAAGGATAATTCCAGATGGTGGTCCTGCATCCAAACACCCGGAAAAAGTCAAAAGAGTCATCTTTTGCACTGGAAAAGTGTACTATGAGCTAGCAAAACAGAGAAACCAGTTGAAGTTGGAGGCGGATGTTGCAATTGTCAGATTGGAGCAGATATCACCCTTCCCTTTTGACCTGATCAAGGCTGAGGTCAAAAAGTACAGCAACGCTGAACTCATATGGTGTCAAGAGGAACACAAGAATATGGGCTACTATGATTACATAAGGCCACGTTTCCTCACAGTGCACCCCAAGAGTCCAATATGGTATGTGGGCCGTGACCCTGCTGCAGCCCCTGCCACAGGAAACAAATTCACTCATCTGGCTGAGCTGAAGAGGTTCTTGGACACCGCTTTTAACCTCGAGGCTTTCAAGGGCAGGAATTTTTGATGCTATTGTGGTAGATGTGAAAGTtcgattttaaaatgaaatataacagGTATCAAcgcacaatttattaaataaggtCATGATGCCAAAGTATGGAAAATTGATAAATTGAACACAAAACAGCAAACAGAAATTTGTACCAGAAATCCCTTATCTGTCCCAAGTAATcggattttcatatttttttatttatttgtcttccATAACTGTCACACTTGGCTTCATCCTGAGACATCAAACAGATGGCATGTAGACAAGTAACAATATTCTCTATGGCAGTGGCGATATTCTCTGTAGCTTCCAAAAAATATGCTTCCTTTTTAGACTTTAGGGTACTTGTGGGAATCACAACATTTATAACGTCGACATGTCTATGACAACTTTCAAATGCTATACACACtgggaaagaaataaaaggaagTTACAAAACAATTACTTTAACCACCAATCTGATAAGCACAAGTATCTGATGCAATATCTTTCCGTGTAATCTTTCTATCAGCAAACTGCATTAGTAGTGGATTTTAGCAAGACTGAAACTTGTACATGGTCATCTGTCATGATCATTCTGTGGCTGCCTGTAGTTAAACTATTAACTGTCGTTCAAGCAGGACTAAACAGCTATAGCAATAATCCAGCTAACTGGATTTTACGTGAATCTGTGCTGTATGTTACTCATATGATAGGCACTTGCTATAgtgaatgtaatgtttaaaaaggGTAACAAATATTAGATTTAGTTGTAGTGTGATATAAAAAACTAGGCATTGCTCATCGTGAAAATGatcataaataaaattcacTGTGATAGATTGTGATAAATGACAGACGTTTCTCagcaataatgcaataaactgTCACTGACAAACGA
>XM_043254517.1
TTTAGAGCAAAGTGACCGACTGCAGTTCCGCGTTCAGCGCGTGCAGGCGGATTACGGGACGGATTGACGTCGGAGAGATTATAGGACAGAGAAAACAAACTCCAGCCTGAATCGAACGACAGACCGCGTTTGACCTCGAGCGGGACCGTCTTCATCTGCCTGCAGTCAAgTCTTGGGATGCGTACTTTCGTAATGCCCAAGCCAGCAGTTCAGAGGAGACTGGAGAGAAGCGTCTGTCTGCGCTGCTTCAGGGCCGAGCCATGTCCCAGACACCTGCCATGTCAGAGAAGGTGGTGGAGGATCATTTGGCAGTCCACACTCTTATAAGAGCCTATCAGGTACGCGGTCACCATGTGGCCAGGCTGGACCCTCTTGGCATTCTCACTGCCGATCTGGATTCCTTCGTTCCCTCAGATTTAATCACATCGATTGACAAGCTTGGATCCTATGGCTTGGAAGAATCTGATCTGGATAAATCATTTCAGTTGCCACTAACCACATTTATTGGGGGAAATGAAAGCACACTCCCACTGAGAGAAATCATACACAGACTTGAGACATCATACTGTGGTCATACCGGAGTGGAATTCATGTTCATCAACAATATGGAGCAGTGCCAGTGGATCCGCCAGAAGTTTGAAACTCCAGGAATCATGACGTTTTCCCACGGAGAGAAGAGGACTTTGCTGGCCAGGCTGGTTCGCTCAACACGGTTTGAGGATTTTCTTGCTCGCAAATGGTCTTCAGAGAAACGCTTTGGTTTGGAAGGCTGTGAGGTTCTCATCCCTGCCCTGAAGATGATCATTGACAAATCCAGTGAAGCTGGTATAGAAAGTGTAATTATGGGAATGCCTCACAGAGGCCGACTAAACGTCCTGGCCAATGTAGTTCGCAAAGATCTGGATCAGATATTCTGTCAGTTCGATCCCAAACTTGAGGCTGCAGATGAGGGTTCAGGAGATGTGAAATATCACTTGGGGATGTACCATGAGCGGATAAACAGGGAAACAGATAAGAATATCACATTGTCTCTGATGGCAAACCCCTCTCATCTAGAGGCAGTAGATCCTGTCGTTCAGGGCAAGACCAAGGCAGAGCAGTTTTACAGAGGAGACACTGAAGGAAAGCGGGTGATGTCTATTTTAATGCATGGTGACGCTGCTTTTGCTGGTCAGGGAGTTGTCTACGAAACCTTCCATCTCAGTGAACTGCCTTCATATACCACTCATGGCACCATCCATGTTGTGGTCAATAATCAGattggattcaCCACAGATCCCCGAATGGCGCGTTCCTCTCCCTACCCAACGGATGTGGCTCGAGTAGTCAACGCACCCATCTTCCATGTCAACGCTGATGACCCAGAGGCTGTGATGTATGTTTGTAAGGTTGCTTCAGAATGGAGAAATACTTTCAACAAGGATGTTGTGATAGACCTGGTGTGTTACCGGCGGTTTGGACATAATGAGATGGATGAACCCATGTTCACTCAACCCCTCATGTACAAGCAGATCCGCAAACAGGAACATGTGCTGAAGAAGTACGCCGACAAACTCATCTCTGAGGGAGTTGTAACACTGCAAGAGTTTGAGGAGGAAGTTGCTAAATATGACAAGATCTGTGAGGAGGCGTACACCAGCTCCAAAGATGAGAAGATCCTACACATCCGCCACTGGCTTGACTCTCCATGGCCAGaCTTCTTTAAACCAGATGGAGAGCCAAAGAGCATGAGCTGTCCTTTCACTGGACTAAATGAAGAGGTGCTCAAGCACATTGGCGAGCTAGCCAGTTCAGTCCCTCTGAAGGATTTTGCAATTCACAGCGGCTTGTCACGTATCCTTCGAGGCAGAGCAGATATGGTTGTGAAGCGAACGGTGGACTGGGCTCTGGCAGAGTACTTGGCCTTCGGCTCTTTGCTGAAGGATGGCATTCACGTGAGACTCAGTGGACAAGATGTGGAAAGAGGAACATTTAGTCACCGTCACCACGTCTTGCACGATCAGGAAGTTGATAAGCGCTTCTGTATTCCAATGAACCACCTGTGGCCGAACCAGGCTCTCTACACAGTGTGCAACAGCTCCCTGTCTGAATATGGAGTTTTGGGGTTTGAGCTGGGTTTTGCCATGGCTAGTCCTAATGCCCTGGTTTGCTGGGAGGCTCAGTTTGGTGACTTTCAAAACACTGCCCAGTGCATCATAGACCAGTTCATCACTGCAGGCCAGGCCAAGTGGGTCCGCCACAATGGCATCGTTTTACTGTTGCCTCATGGGATGGAGGGAATGGGCCCGGAGCACTCGTCAGCACGGCCCGAGCGCTTCCTGCAGATGAGCAAGGACGACCCTGATCGCTATCCGGAATTCACTGGAGACTTTGAGGTCCAGCAGCTCTATGACTGTAATTGGATCGTGGTCAATTGCTCAACACCTGCCAACTACTTCCATGTGCTTAGAAGGCAAATCTTATTACCATTCAGAAAGCCACTGATCATTTTCTCACCAAAGTCTTTACTGAGGTTGCCCGAGGCACGCTCCAGCTTCGATGAGATGATCACAGGGACAAAATTCCTAAGGATAATTCCAGATGGTGGTCCTGCATCCAAACACCCGGAAAAAGTCAAAAGAGTCATCTTTTGCACTGGAAAAGTGTACTATGAGCTAGCAAAACAGAGAAACCAGTTGAAGTTGGAGGCGGATGTTGCAATTGTCAGATTGGAGCAGATATCACCCTTCCCTTTTGACCTGATCAAGGCTGAGGTCAAAAAGTACAGCAACGCTGAACTCATATGGTGTCAAGAGGAACACAAGAATATGGGCTACTATGATTACATAAGGCCACGTTTCCTCACAGTGCACCCCAAGAGTCCAATATGGTATGTGGGCCGTGACCCTGCTGCAGCCCCTGCCACAGGAAACAAATTCACTCATCTGGCTGAGCTGAAGAGGTTCTTGGACACCGCTTTTAACCTCGAGGCTTTCAAGGGCAGGAATTTTTGATGCTATTGTGGTAGATGTGAAAGTtcgattttaaaatgaaatataacagGTATCAAcgcacaatttattaaataaggtCATGATGCCAAAGTATGGAAAATTGATAAATTGAACACAAAACAGCAAACAGAAATTTGTACCAGAAATCCCTTATCTGTCCCAAGTAATcggattttcatatttttttatttatttgtcttccATAACTGTCACACTTGGCTTCATCCTGAGACATCAAACAGATGGCATGTAGACAAGTAACAATATTCTCTATGGCAGTGGCGATATTCTCTGTAGCTTCCAAAAAATATGCTTCCTTTTTAGACTTTAGGGTACTTGTGGGAATCACAACATTTATAACGTCGACATGTCTATGACAACTTTCAAATGCTATACACACtgggaaagaaataaaaggaagTTACAAAACAATTACTTTAACCACCAATCTGATAAGCACAAGTATCTGATGCAATATCTTTCCGTGTAATCTTTCTATCAGCAAACTGCATTAGTAGTGGATTTTAGCAAGACTGAAACTTGTACATGGTCATCTGTCATGATCATTCTGTGGCTGCCTGTAGTTAAACTATTAACTGTCGTTCAAGCAGGACTAAACAGCTATAGCAATAATCCAGCTAACTGGATTTTACGTGAATCTGTGCTGTATGTTACTCATATGATAGGCACTTGCTATAgtgaatgtaatgtttaaaaaggGTAACAAATATTAGATTTAGTTGTAGTGTGATATAAAAAACTAGGCATTGCTCATCGTGAAAATGatcataaataaaattcacTGTGATAGATTGTGATAAATGACAGACGTTTCTCagcaataatgcaataaactgTCACTGACAAACGA

Function

symbol description
ogdhl Predicted to enable oxoglutarate dehydrogenase (succinyl-transferring) activity and thiamine pyrophosphate binding activity. Predicted to act upstream of or within tricarboxylic acid cycle. Orthologous to human OGDHL (oxoglutarate dehydrogenase L).

NR:

description
PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial

GO:

id name namespace
GO:0006099 tricarboxylic acid cycle biological_process
GO:0030976 thiamine pyrophosphate binding molecular_function
GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity molecular_function

KEGG:

id description
K00164 OGDH, sucA; 2-oxoglutarate dehydrogenase E1 component

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254516.1 True 4079 mRNA 0.46 23 10613939 10633243
XM_043254517.1 False 3864 mRNA 0.46 22 10613940 10633243

Neighbor

gene id symbol gene type direction distance location
parga parg,LOC107716337,LOC107673942,LOC107585315,LOC107708050,LOC107683745 coding upstream 2448 10584381 ~ 10611491 (+)
myofl LOC107707528,LOC107588650,LOC107673938,LOC107688302,LOC107716336 coding upstream 30118 10560676 ~ 10583821 (+)
unc5b unc5b,LOC107588651,LOC107707543,LOC107688303,LOC107585316,LOC107673953 coding upstream 56057 10509514 ~ 10557882 (+)
LOC122357093 LOC107688300,LOC107673862,LOC107588652 coding upstream 198703 10389085 ~ 10415236 (+)
LOC122357091 LOC107708061,LOC107688300,LOC107716282 coding upstream 228337 10356563 ~ 10385602 (+)
lrit1a lrit1a,LOC107585312,LOC107673966,LOC107716298,LOC107707479,LOC107588643,LOC108442250 coding downstream 26360 10659603 ~ 10663760 (+)
lrit2 lrit2,LOC107707486 coding downstream 30728 10663971 ~ 10668889 (+)
chst3a chst3a,LOC107708342,LOC107588701,LOC107673894,LOC107683746,LOC107585362,LOC107716304 coding downstream 48505 10681748 ~ 10689438 (+)
pax2a pax2a,pax2,LOC101463634,LOC107707401,LOC107668824,LOC107588637,LOC107716343,LOC107585307 coding downstream 162839 10796082 ~ 10828360 (+)
cuedc2 cuedc2,LOC107585308,LOC107716345,LOC107673918,LOC107588639,LOC107707447 coding downstream 248676 10881919 ~ 10885510 (+)
G92563 NA non-coding upstream 304163 10309237 ~ 10309776 (+)
G92552 NA non-coding upstream 337761 10275584 ~ 10276178 (+)
G92524 NA non-coding upstream 448283 10164559 ~ 10165656 (+)
G92513 NA non-coding upstream 543156 10068488 ~ 10070783 (+)
LOC122356803 NA non-coding upstream 564497 10044781 ~ 10049442 (+)
G92671 slc18a3,slc18a3a,LOC107708354,LOC107683739,LOC107716340,LOC108442244 non-coding downstream 9313 10642556 ~ 10645237 (+)
G92675 NA non-coding downstream 24265 10657508 ~ 10702103 (+)
LOC122357062 NA non-coding downstream 119990 10753233 ~ 10763691 (+)
G92729 LOC107716350,LOC107673932,LOC107707381,LOC107588636,LOC107585302 non-coding downstream 187699 10820942 ~ 10947919 (+)
G92731 NA non-coding downstream 326177 10959420 ~ 10961696 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other upstream 193513 10416240 ~ 10420426 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other upstream 364214 10205113 ~ 10249725 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other upstream 1179334 9430178 ~ 9434605 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other upstream 1449825 9161517 ~ 9164114 (+)
spef1 zgc:66426,LOC107601866,LOC107725472,LOC107666492,LOC107743614 other upstream 1524818 9080848 ~ 9089121 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other downstream 331612 10964855 ~ 10968914 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other downstream 580283 11213526 ~ 11218175 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other downstream 622351 11255594 ~ 11262620 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other downstream 756142 11389385 ~ 11413515 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other downstream 938417 11571660 ~ 11592600 (+)

Expression


Co-expression Network