LOC122356071 (mea1,LOC107739467,LOC107696388,LOC107728068,LOC107564221)


Basic Information

Item Value
gene id LOC122356071
gene name mea1,LOC107739467,LOC107696388,LOC107728068,LOC107564221
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3050548 ~ 3052828 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254523.1
GCGCGTCGACGTGTCGTGACGTAATCAATGCGCAGTTTTTCTTCTGCGCAGTACCGGAAGCGAATAACAGCTCTCGGATACAGATGCTAAAAAACATTTGGATAAAAGAGCTCCACAGAAGAAACAGTTGTTGAATGGAAGTGGTGAGGGCCAGAGAGATGGGCCCCGAGAGAATCTTACCGAACCCCGAGGAGGATGCGCTGCAGGAGCGGCCCTCAGACACCGCGGCGCAGGAGGAGTGGAGCGGGGAGGACatagaggaggaggaggaggaggaggaaggaggCGCCGGAGACGAGGACAGTGCCGGGTACTATTACCAGCCTCTCAATCAAGACCCAGACGGGATGAACGGCTCTCACACGGAGCCCGCGGACGAGGGAACCACCGCggagcagctgcaggacgtccAGGACAGAATAGAGGCCATGGGTCTGTTCCTGCCCCAGCCTCCTCCTCCTGACAGCGACGAAGAGGAGGATCCCGAAGGAGCTGCTGCTCGTAGAAGTTTCGCGTCCATTCCCATGGATGCAGATCACGTTGAACTGGTGAAAAGGACCATGGCTGCAGTAAATTTGCCGACACTAGGAATCCCTGCCTGGGCCCAGGAGATCTCTGACGACCAGTGGAAGGACATGGTCCAGCAGACGCTTCAGTCCAGACAGAGCTCGGCAGGCCTGAGACTGGACCGCAAGTGAAACCATTACAAGAGCCTCATCTCACCTGCTGCAGGAACATGAAACAGAGCTTCTGACATCTCAAATCGAAAGGCATTCCTCCCTTTAGGTGTGGTTTACACAAACTGTGGACTGAAATTCATTAATGGCTCGCCTTGTAATTGCTTTGAACTGATAGACAGCCGGTGTCCAGTTGATGCGGTTACCGAGTAGGCAAAAAAGACGCTCCTGAAAACCTCCCAAATGTTTTTCAACCCAGCTGTATTGACGCAGTGTGTTCTTTGTGAGGATTTAGCAATTTGTCGGTTGCCTTTGTATGACAGTATAGACATGTAATGGTGCATCTCAGTAATACTCGCATCTCCATTAACCCGAATGTTGATACCCGTGCAATGAGTGATTGATCCTTTATATACCGCACACGGCTCGAGCAACACAAATGGGCGTCgcatcttttgtgtttctttatttttgttctgtacATACATGAACATCTGTACAAAATATGACTTTCATACTATGTAATGCTCAACCTAATTAAAGTACAACATATGTACATATGACCTGGAAA
>XM_043254524.1
CTTCTGCGCAGTACCGGAAGCGAATAACAGCTCTCGGATACAGATGCTAAAAAACATTTGGATAAAAGAGCTCCACAGAAGAAACAGcaGTTGTTGAATGGAAGTGGTGAGGGCCAGAGAGATGGGCCCCGAGAGAATCTTACCGAACCCCGAGGAGGATGCGCTGCAGGAGCGGCCCTCAGACACCGCGGCGCAGGAGGAGTGGAGCGGGGAGGACatagaggaggaggaggaggaggaggaaggaggCGCCGGAGACGAGGACAGTGCCGGGTACTATTACCAGCCTCTCAATCAAGACCCAGACGGGATGAACGGCTCTCACACGGAGCCCGCGGACGAGGGAACCACCGCggagcagctgcaggacgtccAGGACAGAATAGAGGCCATGGGTCTGTTCCTGCCCCAGCCTCCTCCTCCTGACAGCGACGAAGAGGAGGATCCCGAAGGAGCTGCTGCTCGTAGAAGTTTCGCGTCCATTCCCATGGATGCAGATCACGTTGAACTGGTGAAAAGGACCATGGCTGCAGTAAATTTGCCGACACTAGGAATCCCTGCCTGGGCCCAGGAGATCTCTGACGACCAGTGGAAGGACATGGTCCAGCAGACGCTTCAGTCCAGACAGAGCTCGGCAGGCCTGAGACTGGACCGCAAGTGAAACCATTACAAGAGCCTCATCTCACCTGCTGCAGGAACATGAAACAGAGCTTCTGACATCTCAAATCGAAAGGCATTCCTCCCTTTAGGTGTGGTTTACACAAACTGTGGACTGAAATTCATTAATGGCTCGCCTTGTAATTGCTTTGAACTGATAGACAGCCGGTGTCCAGTTGATGCGGTTACCGAGTAGGCAAAAAAGACGCTCCTGAAAACCTCCCAAATGTTTTTCAACCCAGCTGTATTGACGCAGTGTGTTCTTTGTGAGGATTTAGCAATTTGTCGGTTGCCTTTGTATGACAGTATAGACATGTAATGGTGCATCTCAGTAATACTCGCATCTCCATTAACCCGAATGTTGATACCCGTGCAATGAGTGATTGATCCTTTATATACCGCACACGGCTCGAGCAACACAAATGGGCGTCgcatcttttgtgtttctttatttttgttctgtacATACATGAACATCTGTACAAAATATGACTTTCATACTATGTAATGCTCAACCTAATTAAAGTACAACATATGTACATATGACCTGGAAA

Function

symbol description
mea1 Predicted to act upstream of or within spermatogenesis. Orthologous to human MEA1 (male-enhanced antigen 1).

NR:

description
PREDICTED: male-enhanced antigen 1

GO:

id name namespace
GO:0007283 spermatogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254523.1 True 1248 mRNA 0.51 4 3050548 3052828
XM_043254524.1 False 1211 mRNA 0.51 4 3050548 3052788

Neighbor

gene id symbol gene type direction distance location
tuba4l tuba4l,LOC107669576,LOC107706828,LOC107564211,LOC107655627,LOC107559781,LOC108256914 coding downstream 95096 2953239 ~ 2955452 (-)
LOC122356237 syndig1,LOC107564210,LOC107702699,LOC107559783,LOC107660247,LOC107728059 coding downstream 137032 2891387 ~ 2913516 (-)
LOC122356239 LOC107702675,LOC107754747,LOC107564209,LOC107660246,LOC107559771,LOC107754739 coding downstream 184723 2862008 ~ 2865825 (-)
si:zfos-1056e6.1 si:zfos-1056e6.1 coding downstream 197164 2848173 ~ 2853384 (-)
LOC122356217 LOC107719934,LOC107699158,LOC107597732 coding downstream 441680 2607080 ~ 2608868 (-)
LOC122356068 dlk2,LOC107696386,LOC107669558,LOC107559779,LOC107728069 coding upstream 3920 3056748 ~ 3072394 (-)
mea1 mea1,LOC107739467,LOC107696388,LOC107728068,LOC107564221 coding upstream 223340 3276168 ~ 3278381 (-)
lrrc73 lrrc73,LOC107728077,LOC107696385 coding upstream 349109 3401937 ~ 3409645 (-)
yipf3 yipf3,LOC107696384 coding upstream 359503 3412331 ~ 3416932 (-)
LOC122356548 qki,LOC107739475,LOC107559772,LOC107696379,LOC107669572 coding upstream 401914 3454742 ~ 3467057 (-)
G90441 znf318,LOC107739464,LOC107564219,LOC107728066 non-coding downstream 36812 2985936 ~ 3013736 (-)
G90437 LOC107739478,LOC107564218 non-coding downstream 72852 2974996 ~ 2977696 (-)
G90408 NA non-coding downstream 153080 2897038 ~ 2897468 (-)
G90312 NA non-coding downstream 425275 2624904 ~ 2625273 (-)
G90300 NA non-coding downstream 426639 2621236 ~ 2623909 (-)
G90454 NA non-coding upstream 123790 3176618 ~ 3178560 (-)
G90459 NA non-coding upstream 139163 3191991 ~ 3193302 (-)
G90482 NA non-coding upstream 317337 3370165 ~ 3401066 (-)
G90504 NA non-coding upstream 397596 3450424 ~ 3450733 (-)
G90505 NA non-coding upstream 398166 3450994 ~ 3451413 (-)
G90311 polh other downstream 423391 2626328 ~ 2627157 (-)
G90304 NA other downstream 465217 2584196 ~ 2585331 (-)
G90161 tp53bp2,LOC107582030,LOC107705014,LOC107742808 other downstream 805470 2151837 ~ 2245078 (-)
LOC122356758 ccdc88a,LOC107571560,LOC107701441,LOC107570323,LOC107695193 other downstream 1358194 1684449 ~ 1692354 (-)
LOC122356439 LOC107747448,LOC107690165,LOC107678593,LOC107582517,LOC107576986,LOC107708380 other downstream 1493501 1554230 ~ 1557047 (-)
dlk2 dlk2,LOC107669558,LOC107696386,LOC107559779,LOC107728069 other upstream 228509 3281337 ~ 3298549 (-)
timm23b timm23b,timm23a,LOC107565600,LOC107669571,LOC107739474,LOC108263229,LOC108426535 other upstream 369925 3422753 ~ 3435580 (-)
wu:fj16a03 NA other upstream 898935 3951763 ~ 3955955 (-)
hcar1-3 LOC107590023,LOC107678489,LOC107707144,LOC107699282,LOC107586503,LOC107736563 other upstream 999915 4052743 ~ 4055413 (-)
LOC122356061 LOC107699307,LOC107586507,LOC107708387,LOC108442385,LOC108263686,LOC107727357,LOC106576682,LOC104955882 other upstream 1620138 4672966 ~ 4689168 (-)

Expression


Co-expression Network