wu:fj13e08 (LOC107707292,LOC107668826,LOC107588624)


Basic Information

Item Value
gene id wu:fj13e08
gene name LOC107707292,LOC107668826,LOC107588624
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 11186438 ~ 11192124 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254565.1
CGAAGAAGACGATTCAGCAGTGTAAACATGGCATTTTTTTAGTCAACAAAAAAGTAACTTCTGAACGCAAATAACTGTTTTGGTTCAGCCTTTGGGAAGAGTCTACATCCAGTCTCAAGAAGAACTACCTGAATTAGAGCTGGACATCGAAAGTCAAAGACTCGCGAAAATGGAGCAAGGTTTGCCATCTGCGAGCGTTTCCCAGCACTTTTTCAATGGATGGTTAAAAAGAGAAGATGACAGTTCACTTACCTTGCAGTCAGACTTCATTAAGTCAGAAATCCAAGTTAAAGTGGAACCTGATCAAGATGACTCTTCATTGCTTGATGTGAACGAGCTAGGAACGTTTTCTCATCCTCAGGGGAATGTTAAAGAGGAGTTTTTGGACCTCGGTTTGCAAATCTTACCAGCTGGCCTAATGCCTCCAGTTGAGATGGAAGAAGAGCTTGAAATCACACGCACTTCTCCAGATAAATCTCTGAATAGAAGAACTGATACATCAAGCAAAGGAAAACGATGCACAGTCAAAAAAAGAAcatcaagaaaaagaaaaccaacaGAGGAAATTATTCCACCTAAAATGAATTCTGATGTATCAAGTGAAAGAATGTCATTGTTAATAATGCAGGGAAATGCCAAACGACATCCAGAGAAAGCAGttttgtctATGGCGTGCCTTAAAATGCCTGCAGCTGAGATTACAGATACACTAAGAGAAGAATATGAATCCATTGCTGCCCCTGATTTGGAATCTGAGGTCTCTGATAGTGATGGCCCAGATTTGACAGAAGGTCAGAAAACTGTCTACACAGGCTTTGAGTTCTCATCTGAGGAATCTAGTGATGAGGAGAGTGAAGATCGCTTGAGTCGATGGAGCAAAGGAGACTCTTACTGGAGCAAATATCCTCCTCAAAGTGAAACCATGACCTCCTCACAGAGCAGCGCAGGGTCTGCACCAGGGTTTTCAGTAAAGACACCTAAAGGTGCCTGGGAACTTTTCATGAGCGAAAACATCATTAATGAGATACTGCAATGTACCAACTTGGATGGACAGAGAGAAGCGTTGGCAAAAGGCAAAGTGTGGCAAAAGATCACTAAAGAAGAATTAAAAGCCTTTATTGGTCTGAGTCTTCTCATTGGTGTGGAGAGAAGTAGCGATGTTCCAATCCGGGAACTGTTTATGGATCCATTACAGAACCCACTGTATAGAGCTACCATGTCTGTTGGTAGATATCAAGACCTTCATAGATTCCTGCAATTTGATAACAAGAAAACCAGGGTGGCGAGAAAGGCATCAGACCGCATGGCAGCCTTCCGAAATGTGTGGGACCTGTTCCTGACAAACTGCAGGAAAAGGTTAATCCCGAGGCATTGTGTCACTGTAGGTGAGCAGCTTCTGCCATTCCAGGGAAGTTTCTGCAACATATGCCAAGCTGCCCCACGAAGAGTGGCATAAAAATCTTTTGGATGTGTGATTCCGAGGTCCCCTACGCCATTGATGGGGTCATCTACACAGGCAGACATCCAGGAGAGGAGACTGAGGTGAACCTTGCAGAGAACACGGTCCTGAGGTTGTCCAGTGGACTTCAGcaaaaagGTCTCAACATTACAATGGACAGCAACTTCACCAGTGTCCCTCTGGCAGAGAAGCTTTTCGAGAAAAGCTTGACCGTGGTCGGGGCTCTTCACCATAAGAATCCACATGTGCCACCGATTATGAAGCCATCCAAGTTACGAGCATCACATACCTCTGAGTTTGGTTTTTGTGGCAAAGTATTCATGGTGAGCTATGTGCCAAAACTAAAAAAGACAGTGATTCTGTTGAGTACAATGCATACCAGCGATGCACTGAATGAAACAAGTGCTAAAAACAAGCCAGAGGTCATTCAGTACTACAACTGCACCAAAGGAGCAGTCAGCACTGTTAGGCTAATGGCTGAAAATTATACTTGCAAGAGGCAAACAAAGAGGTGGCCTATGCTGCTTTGGTATAACATGTTGGATGTTGCCATTGTAAACTCCTACTCCATTTTTATTGCTCAGCACCCGAGCTTCATGGGAGGTGGTCATAGTGCTCAGCGCTTGTTCATAAAAGAGCTAGCGAAAGAGCTTGTAGTGCCTCAGATACATAGGCGCAGAGAAGAAAGCCCTGGATTATCCACGAACATCCTTGAGGCCATGGACAGATGTGGGATGCCTGCATCGTTGTCATCTGTCAATTTTGAACTCCAAGAACAGAGCTGtcaaaacagaataagaaaaagatGTTATTACTGTCCCTCTGGAAGAGACAGAAAAGTGAGCAAGTTCTGTAGTGAATGCAGTCGCCCTGTCTGCAAAGATCACAGCCACATGTTGGTGACTTGCTACCGGTGCATGCCTTAAGACCCATACAGAAACAGTTTGTACATTTCTATTCTGCAGGGATAATGACAGTTCTGCTGacaaatttattataattatcgTTAACCGTACAATGTAGATTTGACATCCATGTTTATAGATATAAAGTTGagtttaagtacattttcagtgttATGCGTTAAACTTgaacattttgattttgcaaaatgttattgtttactaaacataaatatatatgaatgctGTGCATCTCAATTTCGATCAGTCAGGTGAATGAAGTGTTAAAAAGCGTGTGCAGACAGGCAAGCAAGTATATTAACAACACCACAAGGTGGAGCACTAATCAGTATGAGATTGTAGGCCAGAATACCTCAGGTGAATcgttgttttgctgttttactgtGTGAGAAtcctttagattttttaaaacccCACCTGGTCCATTAAAATGCAGTCGTTATGTTACGagtgtatttatttcttcttagtaggctttttttatgttctttacTACTTCTGATTAAGTATGATTgattaaactgaaaacaaatgttCCTTCAAAAACTAATACCTGAAGAGTTTGCTCTTTTTTCAGGTGTTTTAAAAGAACGGGTTTCCCTGGGTTCCCTGTTTGTGGCTCTTCACTTAAGAATCTCACCCCTgttgttaaataaacaaacccaTTTGC
>XM_043254566.1
CGAAGAAGACGATTCAGCAGTGTAAACATGGCATTTTTTTAGTCAACAAAAAAGTAACTTCTGAACGCAAATAACTGTTTTGGTTCAGCCTTTGGGAAGAGTCTACATCCAGTCTCAAGAAGAACTACCTGAATTAGAGCTGGACATCGAAAGTCAAAGACTCGCGAAAATGGAGCAAGGTTTGCCATCTGCGAGCGTTTCCCAGCACTTTTTCAATGGATGGTTAAAAAGAGAAGATGACAGTTCACTTACCTTGCAGTCAGACTTCATTAAGTCAGAAATCCAAGTTAAAGTGGAACCTGATCAAGATGACTCTTCATTGCTTGATGTGAACGAGCTAGGAACGTTTTCTCATCCTCAGGGGAATGTTAAAGAGGAGTTTTTGGACCTCGGTTTGCAAATCTTACCAGCTGGCCTAATGCCTCCAGTTGAGATGGAAGAAGAGCTTGAAATCACACGCACTTCTCCAGATAAATCTCTGAATAGAAGAACTGATACATCAAGCAAAGGAAAACGATGCACAGTCAAAAAAAGAAcatcaagaaaaagaaaaccaacaGAGGAAATTATTCCACCTAAAATGAATTCTGATGTATCAAGTGAAAGAATGTCATTGTTAATAATGCAGGGAAATGCCAAACGACATCCAGAGAAAGCAGttttgtctATGGCGTGCCTTAAAATGCCTGCAGCTGAGATTACAGATACACTAAGAGAAGAATATGAATCCATTGCTGCCCCTGATTTGGAATCTGAGGTCTCTGATAGTGATGGCCCAGATTTGACAGAAGGTCAGAAAACTGTCTACACAGGCTTTGAGTTCTCATCTGAGGAATCTAGTGATGAGGAGAGTGAAGATCGCTTGAGTCGATGGAGCAAAGGAGACTCTTACTGGAGCAAATATCCTCCTCAAAGTGAAACCATGACCTCCTCACAGAGCAGCGCAGGGTCTGCACCAGGGTTTTCAGTAAAGACACCTAAAGGTGCCTGGGAACTTTTCATGAGCGAAAACATCATTAATGAGATACTGCAATGTACCAACTTGGATGGACAGAGAGAAGCGTTGGCAAAAGGCAAAGTGTGGCAAAAGATCACTAAAGAAGAATTAAAAGCCTTTATTGGTCTGAGTCTTCTCATTGGTGTGGAGAGAAGTAGCGATGTTCCAATCCGGGAACTGTTTATGGATCCATTACAGAACCCACTGTATAGAGCTACCATGTCTGTTGGTAGATATCAAGACCTTCATAGATTCCTGCAATTTGATAACAAGAAAACCAGGGTGGCGAGAAAGGCATCAGACCGCATGGCAGCCTTCCGAAATGTGTGGGACCTGTTCCTGACAAACTGCAGGAAAAGGTTAATCCCGAGGCATTGTGTCACTGTAGGTCCCCTACGCCATTGATGGGGTCATCTACACAGGCAGACATCCAGGAGAGGAGACTGAGGTGAACCTTGCAGAGAACACGGTCCTGAGGTTGTCCAGTGGACTTCAGcaaaaagGTCTCAACATTACAATGGACAGCAACTTCACCAGTGTCCCTCTGGCAGAGAAGCTTTTCGAGAAAAGCTTGACCGTGGTCGGGGCTCTTCACCATAAGAATCCACATGTGCCACCGATTATGAAGCCATCCAAGTTACGAGCATCACATACCTCTGAGTTTGGTTTTTGTGGCAAAGTATTCATGGTGAGCTATGTGCCAAAACTAAAAAAGACAGTGATTCTGTTGAGTACAATGCATACCAGCGATGCACTGAATGAAACAAGTGCTAAAAACAAGCCAGAGGTCATTCAGTACTACAACTGCACCAAAGGAGCAGTCAGCACTGTTAGGCTAATGGCTGAAAATTATACTTGCAAGAGGCAAACAAAGAGGTGGCCTATGCTGCTTTGGTATAACATGTTGGATGTTGCCATTGTAAACTCCTACTCCATTTTTATTGCTCAGCACCCGAGCTTCATGGGAGGTGGTCATAGTGCTCAGCGCTTGTTCATAAAAGAGCTAGCGAAAGAGCTTGTAGTGCCTCAGATACATAGGCGCAGAGAAGAAAGCCCTGGATTATCCACGAACATCCTTGAGGCCATGGACAGATGTGGGATGCCTGCATCGTTGTCATCTGTCAATTTTGAACTCCAAGAACAGAGCTGtcaaaacagaataagaaaaagatGTTATTACTGTCCCTCTGGAAGAGACAGAAAAGTGAGCAAGTTCTGTAGTGAATGCAGTCGCCCTGTCTGCAAAGATCACAGCCACATGTTGGTGACTTGCTACCGGTGCATGCCTTAAGACCCATACAGAAACAGTTTGTACATTTCTATTCTGCAGGGATAATGACAGTTCTGCTGacaaatttattataattatcgTTAACCGTACAATGTAGATTTGACATCCATGTTTATAGATATAAAGTTGagtttaagtacattttcagtgttATGCGTTAAACTTgaacattttgattttgcaaaatgttattgtttactaaacataaatatatatgaatgctGTGCATCTCAATTTCGATCAGTCAGGTGAATGAAGTGTTAAAAAGCGTGTGCAGACAGGCAAGCAAGTATATTAACAACACCACAAGGTGGAGCACTAATCAGTATGAGATTGTAGGCCAGAATACCTCAGGTGAATcgttgttttgctgttttactgtGTGAGAAtcctttagattttttaaaacccCACCTGGTCCATTAAAATGCAGTCGTTATGTTACGagtgtatttatttcttcttagtaggctttttttatgttctttacTACTTCTGATTAAGTATGATTgattaaactgaaaacaaatgttCCTTCAAAAACTAATACCTGAAGAGTTTGCTCTTTTTTCAGGTGTTTTAAAAGAACGGGTTTCCCTGGGTTCCCTGTTTGTGGCTCTTCACTTAAGAATCTCACCCCTgttgttaaataaacaaacccaTTTGC

Function

NR:

description
PREDICTED: zinc finger protein 782-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254565.1 True 3052 mRNA 0.42 4 11186438 11192124
XM_043254566.1 False 2955 mRNA 0.42 5 11186438 11192124

Neighbor

gene id symbol gene type direction distance location
zcchc24 zcchc24,LOC107564348,LOC106577169 coding downstream 452 11153591 ~ 11185986 (-)
ppa1b LOC107716302,LOC107564343,LOC107673928,LOC107668792,LOC107708308,LOC107588733 coding downstream 222040 10959441 ~ 10964398 (-)
sar1ab sar1ab,LOC107668793,LOC107708324,LOC107564344,LOC107588735,LOC107673926 coding downstream 227821 10955438 ~ 10958617 (-)
tysnd1 LOC107673878,LOC107716300,LOC107708039,LOC107578377 coding downstream 231295 10951451 ~ 10955143 (-)
trmt2b trmt2b coding downstream 271682 10913050 ~ 10914756 (-)
LOC122356818 NA coding upstream 181 11192305 ~ 11195431 (-)
LOC122356100 si:dkey-275b16.2,LOC107588698,LOC107708014,LOC107757157,LOC107564350,LOC107668834 coding upstream 2362 11194486 ~ 11199080 (-)
tmem72 tmem72,LOC107707262,LOC107757114,LOC107564361,LOC107673868,LOC107668804,LOC107588619 coding upstream 27479 11219603 ~ 11223816 (-)
LOC122356689 LOC107668812,LOC107588612,LOC107707231,LOC107757103,LOC107548607 coding upstream 120043 11312167 ~ 11324704 (-)
wdfy4 wdfy4,LOC107707224,LOC107668800,LOC107757102,LOC107673934 coding upstream 149130 11341254 ~ 11382311 (-)
G92848 NA non-coding downstream 37186 11146178 ~ 11149252 (-)
G92841 rps24,LOC107588699,LOC107673889,LOC107668764,LOC107564360 non-coding downstream 192640 10989282 ~ 10993798 (-)
G92840 LOC107668764,LOC107716286,LOC107564357,LOC107564360,LOC107673889,LOC106577227 non-coding downstream 197743 10988414 ~ 10988695 (-)
G92839 LOC107668764,LOC107564357,LOC107716286,LOC107673889,LOC106577227,LOC107703098 non-coding downstream 199918 10986302 ~ 10986520 (-)
G92836 LOC107668836 non-coding downstream 208979 10976533 ~ 10977459 (-)
G92842 NA non-coding upstream 64956 11257080 ~ 11262637 (-)
G92934 arhgap22,LOC107588697,LOC107668831,LOC107708000,LOC107673870,LOC107548604 non-coding upstream 218506 11410630 ~ 11411439 (-)
G92935 NA non-coding upstream 220059 11412183 ~ 11413253 (-)
G93062 NA non-coding upstream 432674 11624798 ~ 11625140 (-)
G93063 NA non-coding upstream 437316 11629440 ~ 11629749 (-)
G92819 NA other downstream 251107 10924944 ~ 10935331 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other downstream 551872 10632250 ~ 10634566 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other downstream 994672 10174413 ~ 10191766 (-)
G92267 NA other downstream 2070887 9115093 ~ 9115551 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 3138537 8043565 ~ 8047901 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 8428 11200552 ~ 11218985 (-)
zdhhc16a zdhhc16,zdhhc16a,LOC107708229,LOC107668773,LOC107673955,LOC107548628 other upstream 333279 11525403 ~ 11532457 (-)
six1a six1a,six1,LOC107588725,LOC107675533,LOC107708210,LOC107668775,LOC108434988 other upstream 451806 11643930 ~ 11648035 (-)
utp25 diexf,LOC107668835,LOC107707040,LOC107675582,LOC107757128 other upstream 579304 11771428 ~ 11799032 (-)
vti1b vti1b,LOC107655020,LOC107705385,LOC107724223,LOC107675543 other upstream 1086330 12278454 ~ 12293594 (-)

Expression


Co-expression Network