LOC122356105 (LOC107588620,LOC107707271)


Basic Information

Item Value
gene id LOC122356105
gene name LOC107588620,LOC107707271
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 11213499 ~ 11215087 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254569.1
TAAATGACAGCAGGCCACTGAGCACTTACACTCACAAACACTTTCATCATGACACTGACAGCGTATGCTTCGCTGGCTTTCACCCTCAGCATCCTTCTGACAGTCCAACTGGTGGAAAGTCAATATGTTCCAAAGACCTGTCAGTGTCCGAAGATGGAGAAAAGAGTCAGGGGACCATTTTCAGATTTCAAAGTCACTCTAAAAGGTCCTAACTGTTTACAAGATGAGATCATaGTCACGCGGCAGAAGAACAGTCTCGTGTGTCTAAGTCCAAATGGGCCCCAAGGCAAACGACTGCTGACATGTTGGCAAAGGATGCAAATTAATGGCAAGGacagcaaaaaatgtttacgtcaaaaaaaacaaaagcaaaggcGAAAAAACAAGAAGCAGGTTAAACCCAGGAAGGTCAAGTCTTAACCTCAAGTGCTAAAGACACTAAGGCAAAGAATGTAAGAGATCCACAGGAGAGAATACTCTTCAAAGCTTGTGCAAAGCTTTGCACATAACAAGCATTTCATATGCACTAAACAAGCCAAGGACGTAAGAAAAGGCTCGGGAGGAGTGCACAAGTATATTGAGGCCAAAGGATGGTTTACAATGAAGACATGTTACAACAGGGACATCATTTAACCTTGACATGTTACAGAGGGATGAGTTGAGCCCTAATATGTGGGTCTAATGTACCGGCCAGtgagaagacatttttaaaaaattgtatacatttatatattcttattgttttcataaatgtatatactctTATAAGCATGTGTTCAGTGATCacaaaaatgcttgttttatagtttattctaaattaaaataaacttatttaataaacatgaa

Function

NR:

description
PREDICTED: C-X-C motif chemokine 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254569.1 True 846 mRNA 0.39 4 11213499 11215087

Neighbor

gene id symbol gene type direction distance location
ppifa ppifa,LOC107668776,LOC107588732,LOC107564349,LOC107673899,LOC108442288,LOC108263515 coding upstream 61052 11149996 ~ 11152447 (+)
zmiz1a zmiz1a,LOC107588626,LOC108443181 coding upstream 66873 11033947 ~ 11146626 (+)
rps24 rps24,LOC107673958 coding upstream 220187 10990562 ~ 10993312 (+)
qrfpra LOC107668764,LOC107673889,LOC107716286,LOC107564357,LOC107564360,LOC107588699 coding upstream 223765 10986085 ~ 10989734 (+)
pald1b pald1b,LOC107588630,LOC107707320,LOC107668836,LOC107716354,LOC107673876 coding upstream 231715 10969343 ~ 10981784 (+)
cxcl18a.1 LOC107707282 coding downstream 153 11215240 ~ 11217428 (+)
ercc6 ercc6,LOC107588615,LOC107668807,LOC107757150,LOC107708008,LOC107673869 coding downstream 71963 11287050 ~ 11302394 (+)
drgx drgx,LOC107588616,LOC107708289,LOC107668808,LOC107548637,LOC107673892 coding downstream 88977 11304064 ~ 11309190 (+)
vstm4a vstm4a,LOC107588614,LOC107707245,LOC107673948,LOC107548636,LOC107668767 coding downstream 114190 11329277 ~ 11337428 (+)
lrrc18a NA coding downstream 136885 11351972 ~ 11355204 (+)
G92767 NA non-coding upstream 9815 11202654 ~ 11203684 (+)
LOC122356274 NA non-coding upstream 191443 11004910 ~ 11022056 (+)
G92748 NA non-coding upstream 228854 10984238 ~ 10984645 (+)
G92746 NA non-coding upstream 230220 10982940 ~ 10983279 (+)
G92731 NA non-coding upstream 251803 10959420 ~ 10961696 (+)
G92907 wdfy4,LOC107707224,LOC107757102,LOC107673934 non-coding downstream 153179 11368266 ~ 11368907 (+)
G92923 NA non-coding downstream 199136 11414223 ~ 11462116 (+)
G92952 NA non-coding downstream 294151 11509238 ~ 11509888 (+)
G92958 NA non-coding downstream 299390 11514477 ~ 11533930 (+)
G92962 rrp12 non-coding downstream 303533 11518620 ~ 11519343 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other upstream 244585 10964855 ~ 10968914 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other upstream 793073 10416240 ~ 10420426 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other upstream 963774 10205113 ~ 10249725 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other upstream 1778894 9430178 ~ 9434605 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other upstream 2049385 9161517 ~ 9164114 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other downstream 40507 11255594 ~ 11262620 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other downstream 174298 11389385 ~ 11413515 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other downstream 356573 11571660 ~ 11592600 (+)
G92977 dhrs7,LOC107588602,LOC107548599,LOC107757139 other downstream 388610 11603697 ~ 11604852 (+)
LOC122357045 LOC107654926,LOC107705370,LOC107588681,LOC107675516 other downstream 1216832 12431919 ~ 12436643 (+)

Expression


Co-expression Network