si:dkey-187a12.4 (si:dkey-187a12.4,LOC107718844,LOC107695884,LOC107588745,LOC107716288,LOC107673937,LOC107585337)


Basic Information

Item Value
gene id si:dkey-187a12.4
gene name si:dkey-187a12.4,LOC107718844,LOC107695884,LOC107588745,LOC107716288,LOC107673937,LOC107585337
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24888115 ~ 24890861 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254674.1
CGTGCGCTGGCTGGGGACAGTTTGATAACCATTTCCGCCTATTTCTCGTACATATCGCAGTGTTTATTAAGAGATGCATGTTAAGGCATTAAATTTTGCAAGTGTGTAAGTACATCCATATAAATGGACCCAAACAGTGTCAGTCGCGTTAACTGGGCCATAAACCGCCGGGCGGAGGGTTTAGTAAGTAAACACATGGCAGACATGGCACAGAGACGCTCAGCGGTGTCTGAAGAGGATATGCACCCTCTGCCAGGAGACTTGAGCAGAAGCTCAGAAGACATATCTGGGCGGGCCGAGGTGAATTTCAGCGCGGATTCACAGTCCTACAATCCTGCAGGAGTGGCGGGAAAGTTAATGCGCGAGGATGCGTCTTCAACATCAGAGGCAGCGGCCCACAGACAGATCATATCGCTCCTTATTGAGATCAAGGAGGAGCAGCAGAGGCAGTGGGAAGTTTTGAAAGACCTGCAGGCCAGGATTCATGGACAGGTGTGTGAAGAGGAGGACGAGCCGCTTGACGTAGATCTGCCACTGCGAACAATGGAACAGCTTGACGAAACGGAGCAACATTTAGAGGATACTGAAGCTCAGAAGAGAATGGTGTCACACCTCTCACGGATGGGCGGAGCGACGGTAGATGATGCGGTCCGGCGTCTTATGCATGCTGTTCTCTCTTTCAGTGTTGGATCAGAGCTCAACTGGGTTGGCAGAGGACAGAAAAGGAGCTTCAGAAACACCAGACTGCAGGGTGTTCTGTTTCGTGCCTTGAAAAGGACACCTGTAGGAAAGGAGGCCACGCACCACCAGTTCGCTGATGTAGTGAAGAAATGGTTGCGGTTTGCCCCTTTCCGACAAAGAGGAAGTGGACGAAGACCGCATTGGAAACCTGTTGAGTTCATCTGTCCCAAATATGACAGTACTGTGGATGATCATAACCAGCTTAACCATAACCAGCTGGATTCTGGGGAGATTCAGGTGACAATATAATTACACTAAGTGTTATATGACTAAATGTCCAAAGACAAGTAAAGCGAAATCAGTGAATGAAGAAATGACAAGAGTGTGAAGGATtggcttttaaaatgtatttttttgtcatattacattctattataatatttgcattgctTTCTATAAGTTAAAATACACTATTGTTACGAGAATAATGTGCAGATTTTCACATTACAACATTAATCTTTAAAACCTAATGggcaaatgtaaataattctGTTATAATGGTTATTTTACCTgtacaattgtttttttattgtattgtaaaatgttttgtttttttgtttaaattttacacATTGCAATACATCTcgcaaaatgtaaatttaaaaatgctttgtgtGGTTTTGTGCCATTATGTTATGACGATAAATCGACTTCAGAGTTAAGAATTTCAAACATTAAAGAGTTCATAAGTGTcagaaaatgtcagaaaaaaaattctcacaTGTAATTTAATCACACTTCTCAATAATATACCTAAATACACTTACTCACTTGGTATCTTTGTTAATGTGAACCATTTTACAACAGTTTTCTAAGAACTCTTGCTTCCTggcatatataaaaacacattaaaaacaatttatccATAAA

Function

NR:

description
uncharacterized protein LOC109888787

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254674.1 True 1611 mRNA 0.41 4 24888115 24890861

Neighbor

gene id symbol gene type direction distance location
rin2a LOC107585336,LOC107716314,LOC107588678,LOC107718829 coding downstream 793 24857219 ~ 24887322 (-)
slc17a5 slc17a5,LOC107588676,LOC107673875,LOC107585335,LOC107693696,LOC107718830 coding downstream 31881 24851403 ~ 24856234 (-)
eef1a1a eef1a1a,LOC107693767,LOC107716315,LOC107588677,LOC107718831,LOC107673933,LOC108258313,LOC107585334 coding downstream 36815 24846449 ~ 24851300 (-)
cgasa NA coding downstream 42480 24842270 ~ 24845635 (-)
asrgl1 asrgl1,LOC107695955,LOC107585330,LOC107673965,LOC105911569,LOC103032358,LOC108442615 coding downstream 215781 24667305 ~ 24672334 (-)
slc24a3 slc24a3,LOC107718828,LOC107693448,LOC107673935,LOC107716313 coding upstream 1092 24891953 ~ 24951267 (-)
soul2 LOC107695801,LOC107718843,LOC107588746,LOC107716303,LOC107585342,LOC107673856 coding upstream 73993 24964854 ~ 24966345 (-)
G96436 NA non-coding downstream 171153 24714219 ~ 24716962 (-)
G96435 rims1,LOC107588670,LOC107718836 non-coding downstream 174657 24710744 ~ 24713458 (-)
G96415 NA non-coding downstream 212169 24630553 ~ 24675946 (-)
LOC122357044 NA non-coding downstream 223190 24652927 ~ 24664925 (-)
G96411 NA non-coding downstream 281739 24606130 ~ 24606376 (-)
fgf8a fgf8a,LOC107673879,LOC107585369,LOC107696243,LOC107588741,LOC107716294 other downstream 483400 24399123 ~ 24404715 (-)
borcs7 borcs7,LOC107695248,LOC107585367,LOC107588662,LOC107716326 other downstream 543458 24342749 ~ 24344657 (-)
si:ch211-130h14.4 LOC107660236 other downstream 1444052 23429646 ~ 23444063 (-)
G96053 NA other downstream 1892516 22994037 ~ 22995599 (-)
G96036 mios,LOC107688218,LOC107592123,LOC107592481,LOC107671474 other downstream 2064856 22821981 ~ 22823259 (-)

Expression


Co-expression Network