hk1 (hk1,LOC107676584,LOC107725457,LOC107666459,LOC107743551)


Basic Information

Item Value
gene id hk1
gene name hk1,LOC107676584,LOC107725457,LOC107666459,LOC107743551
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8368937 ~ 8381953 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254678.1
AGCCGTTCCCCATCCTAGCCTCTGCTGCATTTCATGCAAGCGCATTATATGCAGCTTGACTTCCTAGGCCGAGGAGAGTCAGACATTGCCGTAACACTGGGAGGGAACACTCCTACTTGCCGGCTTCTCGTTCCACACTTAACCCACGTTGCTTCTGGGCTCGAATTGTTTTGCCCGCCTCACTGGAAAGGATCGTAAGGCTTGTCCTTCTCTCTTCTGTTGCTTTTTCACCAAAGAGGTGAAGCAGGATGATAGCGGCACAGCTTCTGGCCTATTACTTCACTGAACTGAAGGATGACCAGGTCAAAAAGATTGACAAATACTTATACGCCATGCGGTTCTCTGATGAGACGCTGCGTGATATCATGGCCCGCTTCCGAAGGGAAATGGAGAACGGACTGGCACGAGACACTAACCCGACAGCTACCGTCAAGATGCTGCCCACCTTTGTAAGGTCCATTCCTGATGGATCAGAGAAGGGAGATTTCATTGCCCTGGATCTGGGTGGCTCTAATTTCCGTATTCTGCGGGTGAAAGTGTCTCATGAGAAGAAACAGACAGTGCAGATGGAAAGTCAGATATACGAGACTCCAGAGGACATCATCCACGGCAGCGGATCACGGttgtttgaCCATGTAGCAGAATGTCTCGGAGACTTCATGgagaaacaaaaaattaaagacAAGAAGCTTCCCATGGGGTTCACGTTCTCATTCCCTTGTGCACACTCCAAACTGGATGAGGCTGTTTTGCTAACATGGACAAAACGCTTTAAGGCCAGTGGGGTTGAGGGAATGGATGTAGTAAAGCTTCTTAATAAAGCCATCAAAAAACGTGGGGACTATGATGCAGATATCATGGCTGTTGTCAATGACACTGTGGGAACTATGATGACCTGTGGCTTTGATGATCAGCGCTGTGAAGTCGGCATTATTATTGGTACCGGCACGAATGCATGTTACATGGAGGAGCTCCGACACATCGACCTGGTGGAGGGAGATGAAGGCAGGATGTGTATTAATACCGAATGGGGGGCGTTTGGTGATGATGGCACACTGGAGGATATCCGAACTGAGTTTGACAGAGAGATTGATCGTGGGTCCCTCAACCCCGGCAAGCAGTTGTTCGAGAAGATGGTCAGCGGGATGTACATGGGTGAGCTGGTGAGGCTGATCTTAGTCAAGATGGCTAAAGAAGGCCTACTGTTTGAGGGACGCATCACTCCAGAGCTGCTTACAAAAGGAAAATTTGAAACCAAGCATGTTTCTGCAATTGAAAAGAGCAAAGAAGGACTTACCAAAGCCAAGGAGATTTTGACACGCTTGGGTGTAGAGCCATCTGAAGATGACTGCATTGCTGTTCAGCATGTTTGCGCTATCGTCTCTTTTCGCTCTGCAAATCTAATTGCTGCCACTCTGGGTGCAATCCTTACACGTCTCAAGGACAATAAGAGCAGTCCGCGCCTCCGCACCACAGTGGGCATCGATGGTTCCCTGTACAAGATGCACCCACAGTATTCTCGCCGGTTGCACAAAACTGTGCGTCGCCTGGTGCCGGAGTCTGATGTTCGCTTCTTGCTCTCTGAGAGTGGAAGTGGCAAAGGAGCTGCAATGGTAACAGCCTGGGCTTCCAGGTTGGCCGATCAGACGCGTCAGATTGCCGAGACGCTGGCAGAGTTCCGGTTGACCAAAGAACAGCTGCTGGAGGTGAAAAAGAGGATGAGAACTGAGATCCAGAATGGACTGAGCAAGAACACCCAAAGCACAGCCACCGTCAAGATGCTGCCCACTTATGTGCGGAGCACCCCGGATGGGACAGAAAACGGTGACTTTTTGGCCCTGGACCTTGGAGGTACAAACTTCAGGGTGCTTTTGGTAAAGATTCGCAGTGGCAAGAGACGAACTGTGGAGATGCATAATAAAATTTATGCCATTCCCATTGAAGTAATGCAAGGAACCGGAGAAGAGCTATTTGATCACATTGTATACTGCATATCTGACTTCCTGGACTATATGGGGATGAAGAATGCTCGCCTGCCTCTGGGCTTTACCTTTTCCTTCCCCTGCAGACAAACTAGTCTGGATGCGGGAATTCTGGTAACTTGGACAAAGGGCTTTAAAGCCACCGACTGTGAAGGAGAAGATGTTGTCGGCCTACTGAGAGAGGCGATCAAAAGGAGAGAGGAGTTTGATTTGGATGTCGTAGCCATAGTGAATGACACAGTGGGTACAATGATGACCTGCGCATATGAGGAACCCACATGTGAGGTTGGGCTAATTGCAGGAACGGGTAGCAACGCCTGCTACATGGAGGAAATGCGAAACATTGAGACGGTCGACGGAGTGGACGGTAGGATGTGCGTGAACATGGAGTGGGGAGCGTTTGGAGATAACGGCTGCTTGGATGACATTAGGACTCAGTATGATAATGCTGTGGATGATCTCTCTCTCAATGCCGGCAAACAAAAgtATGAGAAGATGTGCAGCGGCATGTACCTGGGTGAGATTGTACGGAACATCCTGATTGACTTGACAAAGCGTGGCTTCCTCTTCAGAGGACAGATCTCTGAGACCCTGAAGACCAGGGGCATCTTTGAAACCAAGTTCCTTTCCCAAATCGAAAGTGACCGTTTGGCGCTGCTGCAGGTCAGGTCAATCCTGCAGCAGCTGGGCCTGGACAGCACATGCGACGACAGTATTATCGTCAAGGAAGTGTGTGGAGCTGTTTCCCGCCGAGCTGCCCAGCTCTGTGGAGCAGGAATGGCTGCCGTTGTCGACAAAATCCGAGAGAACCGTGGTCTGGACCACCTTGACATCACAGTTGGGGTGGATGGCACGCTGTATAAGCTCCACCCACATTTCTCGCGGATAATGCATCACACTGTTAAGGAGCTCGCCCCCAAATGCAACGTCAACTTCCTGCTCTCAGAAGACGGAAGCGGGAAAGGCGCCGCCTTGATCACCGCCGTCGGGTGCCGCCTCCGCCAGCAAGAACAAAAGAGCTGAACCCTGCGTCGAACAAGCCCTCGGCTCCCTCTCTAGCTCTCTCGCGGAGCGCATACATTTCCACTCGCGGCTGTGACTCGGCTGCAATCCACCACGATCCCGGCACATCCTTCTGCTCATGCCCTGAGCTGTGATTTGACCCCTTCGCTTTGTTTCCCACTCCTACATGTTCCTGTCAGCCTTTCTCTGTGTATGTCTTTGTGTGTTATTAGGGGTTGGTCTATCCGTGTCCACCCAAACTATATAAAAGATGTTAAACTGTCGTTAAAGTATTTATGGATGTATATTGGAAAAAGGGAAGAAATGTAAAACACATTGCAAACATTAAAGTTAAGATATTTGACCAAGTATATgaagatattatttattttatttttatatttgacgTGACAGGAAACAGATACCTGGGGGGAAGAAGGTATTTAGTTGCGATTATGCCAAGCTAATTCCAAACCTCTGCGTATCGTCATTTGTCTGCGTGGCAGTTTGTGGTGTGAAtatattgcaaaacatttgAGGAACATTCGCTAACCGTAACGGCCTCGTCATTGGTCACGGTCGAAGTGAGGAAGACGGGCAAGTTCAGTCTCGCAGTCACAGCTGCCTTCCTGATAATTCAAGCCCCTTTATCCCGGTCGCCGTACGAATGAACAAGGACAGGAAACCTATTGCCTTTGCATATCCACTTTTTCTGAAATAGTCTTACCCTCTCATTCCCGACGAATTTAGCGGATTGTATCATGCGTATTGCTTTTGTCAGCtttttgctgtgtgtgtatgcagaTCTGCAGGTCATCGGTCCTGATTCCCAGTAAATGTCCTTCTGTGTGCCCTGGCTGGTTATTTGTGAGTGATCCTGTGTAGTTGATGTGAGTGAATCTGTGTAGTGGCTCAGAGATCTTCTGATGAATGCATGCCTTATTTGGTAACTGAGGTCTAGCATCCACTGATTTTGTACTATTTCATAGTTGCACTATATAAATAGATGTTCCTGGAAAAACCTATATAGgagaaaaccataaaaatattttgatcaacTCAA

Function

symbol description
hk1 Predicted to enable fructokinase activity; glucokinase activity; and mannokinase activity. Predicted to be involved in cellular glucose homeostasis; glucose 6-phosphate metabolic process; and glycolytic process. Predicted to act upstream of or within carbohydrate metabolic process and phosphorylation. Predicted to be active in cytosol and mitochondrion. Is expressed in several structures, including cardiovascular system; mesoderm; musculature system; nervous system; and neural tube. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 4G; anemia (multiple); hematologic cancer (multiple); obesity; and retinitis pigmentosa. Orthologous to human HK1 (hexokinase 1).

NR:

description
hexokinase-1

GO:

id name namespace
GO:0046835 carbohydrate phosphorylation biological_process
GO:0051156 glucose 6-phosphate metabolic process biological_process
GO:0006096 glycolytic process biological_process
GO:0001678 cellular glucose homeostasis biological_process
GO:0005829 cytosol cellular_component
GO:0005524 ATP binding molecular_function
GO:0008865 fructokinase activity molecular_function
GO:0004340 glucokinase activity molecular_function
GO:0019158 mannokinase activity molecular_function

KEGG:

id description
K00844 HK; hexokinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254678.1 True 4047 mRNA 0.49 18 8368937 8381953

Neighbor

gene id symbol gene type direction distance location
tspan15 tspan15,LOC107563042,LOC107601779,LOC107743619,LOC106612421,LOC106589828 coding downstream 7480 8343096 ~ 8361457 (-)
rufy2 rufy2,LOC107725492,LOC107743555,LOC107563060,LOC107676589 coding downstream 31901 8324645 ~ 8337036 (-)
LOC122356684 LOC107666548,LOC107743620,LOC107676590,LOC107563041,LOC107601825,LOC107725441,LOC107601828 coding downstream 50122 8315189 ~ 8318815 (-)
LOC122356681 LOC107743620,LOC107666548,LOC107676590,LOC107563041,LOC107725441,LOC107601825,LOC107601828 coding downstream 54113 8309437 ~ 8314824 (-)
LOC122356683 LOC107666548,LOC107743620,LOC107676590,LOC107563041,LOC107601825,LOC107725441,LOC107601828 coding downstream 60288 8306483 ~ 8308649 (-)
hkdc1 hkdc1,LOC107743550,LOC107725456,LOC107676583,LOC103047009 coding upstream 5093 8387046 ~ 8396309 (-)
supv3l1 supv3l1,LOC107725491,LOC107601833,LOC107666535,LOC107743553,LOC107676608,LOC107563062 coding upstream 14926 8396879 ~ 8402518 (-)
vps26a vps26a,LOC107676600,LOC107666532 coding upstream 21215 8403168 ~ 8408645 (-)
srgn LOC107601835,LOC107725442,LOC107666570 coding upstream 28055 8410008 ~ 8413812 (-)
LOC122356335 kif1bp,LOC107666503,LOC107676599,LOC107743600,LOC107601781 coding upstream 34779 8416732 ~ 8422038 (-)
G91916 NA non-coding downstream 100864 8267766 ~ 8268073 (-)
G91891 NA non-coding downstream 146322 8168737 ~ 8222615 (-)
G91889 NA non-coding downstream 201005 8157258 ~ 8167932 (-)
G91796 NA non-coding downstream 237089 8131243 ~ 8131848 (-)
G91769 NA non-coding downstream 327719 7997680 ~ 8041218 (-)
G91960 NA non-coding upstream 53073 8435026 ~ 8435920 (-)
G91967 LOC107743599,LOC107601782,LOC107725459,LOC107666363 non-coding upstream 83128 8465081 ~ 8468983 (-)
G91968 NA non-coding upstream 87319 8469272 ~ 8471302 (-)
G92004 NA non-coding upstream 209405 8591358 ~ 8592574 (-)
G92021 pcnxl2,LOC107725461,LOC107601842,LOC107666362,LOC107743596,LOC107676602 non-coding upstream 285543 8667496 ~ 8678386 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 321036 8043565 ~ 8047901 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other downstream 552558 7809849 ~ 7816379 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 1869364 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 1972511 6358201 ~ 6396426 (-)
LOC122356805 LOC107666373,LOC107587882 other downstream 2141665 6220175 ~ 6227272 (-)
G92267 NA other upstream 733140 9115093 ~ 9115551 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 1792460 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 2250297 10632250 ~ 10634566 (-)
G92819 NA other upstream 2542991 10924944 ~ 10935331 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 2818599 11200552 ~ 11218985 (-)

Expression


Co-expression Network