micu1 (micu1,LOC107702683,LOC107754762,LOC107717828,LOC107660220)


Basic Information

Item Value
gene id micu1
gene name micu1,LOC107702683,LOC107754762,LOC107717828,LOC107660220
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 23183915 ~ 23238517 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254692.1
TGACGTTCGCTGTGGGGTGTGTTTGCGCTCGGCCTCCGTAGACGCGGAACTTCAGCGGAGACTGCCGTTAACGGAGAACCGGAGGAGAATCTATAGCCTTTGTTGAAGAAATCTTCCGTGCAGGACTTTAACTGAGATCGCCTGAAGTGTCAGATATGTACCGCTTGCGGGCGCTGACGGCCGCCACCGTCGGGATGGTGCAGTTGTCAAGACGCCATCACACCGGTGCCTTCCGTTCCTATCAGCGGCGCAGACTGATGCTGGCTGCCCTGGTGGGGGTGACGGGCGTCTCAGCCAGCACTGGACTACTGTGGTCAAGAGCACACGCAGAGGCGGGGTCTTCGGTCAAGCATGAGGAGCagatgaaggaggaggagcctcTGAAGGATGTGGATGAGGAGGCGGAGTCGGACGGCGCACTCGAGTCGAGTAGCGGGGGAGAAGATGATGAGGCGGGCTCAgaagggaagaaaaagaaacaacgaGTCGGCTTCCGTGACCGCAAGGTGATGGAGTATGAGAACCGGATTAGAGCTTACTCCACCCCAGACAAGATATTTCGCTACTTCGCCACCCTGAAGATCATCAGCGAGCACGGAGACGCCGAGGTGTACATGACACCGCAGGACTTCGTGCGCTCCATCACTCCCAATGAGAAACAGCCAGAAAaCCTTGGTCTAGATCAGTTTGTGGTGAAACGCTATGATGGAAAGGACTTCTGGCAGACAGAGAAGATCTCTCAGGACAGAGAGAAGTTTGCAGACGAGGACAGCATTTTCTACACACTAGGGGAGTGTGGACTCATCTCTTTCTCTGACTACATCTTCCTCACAACCGTCCTTTCCACTCCTCAGAGGAATTTTGAAATCGCCTTCAAGATGTTTGACTTGAACGGAGACGGAGAAGTCGACCTTGAGGAGTTTGAACAAGTTCAGAGTATTATTCGTTCTCAGACCAGTATGGGCATGAGACACAGAGATCGCTCCACCACAGGAAACACGCTGAAAACAGGAGGCTGCAGTTCAGCCCTCACCACCTACTTTTTTGGGGCCGACCTGAAGGGCAAGCTCACCATCGGCAGTTTTTTGGAGTTTCAGAGGAAATTACAGCATGATGTGCTAAAGCTTGAGttTGAGAGGAATGATCCAATGGATGGCAGGATCACAGAGAAGCAGTTTGGGGGAATGCTGCTGGCCTACAGTGGCGTTCAGTCTCGCAAACTCAAACAGATGCAGAAGAACCTCAAAAGGATGTTCAAGGATGCTCAGggcatCACGTTTGAAGAAGTGGAGAACTTCTTTACCTTCCTCAAGAATGTTAATGATGTGGACACCGCGCTGAGTTTCTATCACATGGCAGGCGCCTCGATAGATAAAGCCACCATGAAGCAGGTAGCCCGCACCGTGGCCAAGGTGGAGCTGTCTGACCATGTGTGTGACGTGGTGTTTGCGCTCTTCGACTGTGacgGAAACGGGGAGCTGAGCAATAAGGAGTTTATCGCCATCATGAAACAGCGTCTGATGCGTGGGCTGGAGAAGCCCAAGGATATGGGTTTCACCCGGCTGGTGCGCGCCATGTGGAAGTGTGCTCAGGACACAGCCTGGGACTTTGCTATGCCCAAACAGCAGTAACGCCCGTCCGTTGATGTTTACGCTCCATATGGagtataattaatcattaaaggACGAACTCGTTTGGAAGGCGCATGCCTAGATGACTACAGCTCATCCTCGGGCCTTCTGTGCCCTCTACTCTACTCAACATCCAGAGCTCACTATCTTCTATTTATTTCATGCCGTCGGCCTTTTTCGGAGTTGAATGCACAATTCTACATACACTAGAATGTGACTGTAGCATGTAAAAAACACAAGAGCGAGAGGTCATCATCAAGTGCCATTGGTCTGAAACTAATGTTAGGACTTACTCAgataattcatataatattcAGCTTTAATTTCGAAACGCTCACCATCGCTTGTTCAGCAGAACGATCCTTATTTTGCACTCCTGTTGTCAAATGTATCTCAGTGTCCACTTCAGAATGGAATTATTAGCATCCGGTGACAACAAGCAATCTCCATTTTGTTATAAGCTGCATTAATGTTTTGGAAATCTCATTGTTGAATGGCTTTATAAGAGTGATGCTGAAAGAATGatactattaaaacattttacatta
>XM_043254693.1
TGACGTTCGCTGTGGGGTGTGTTTGCGCTCGGCCTCCGTAGACGCGGAACTTCAGCGGAGACTGCCGTTAACGGAGAACCGGAGGAGAATCTATAGCCTTTGTTGAAGAAATCTTCCGTGCAGGACTTTAACTGAGATCGCCTGAAGTGTCAGATATGTACCGCTTGCGGGCGCTGACGGCCGCCACCGTCGGGATGGTGCAGTTGTCAAGACGCCATCACACCGGTGCCTTCCGTTCCTATCAGCGGCGCAGACTGATGCTGGCTGCCCTGGTGGGGGTGACGGGCGTCTCAGCCAGCACTGGACTACTGTGGTCAAGAGCACACGCAGAGGCGGGGTCTTCGGTCAAGCATGAGGAGCagatgaaggaggaggagcctcTGAAGGATGTGGATGAGGAGGCGGAGTCGGACGGCGCACTCGAGTCGAGTAGCGGGGGAGAAGATGATGAGGCGGGCTCAgaagggaagaaaaagaaacaacgaGTCGGCTTCCGTGACCGCAAGGTGATGGAGTATGAGAACCGGATTAGAGCTTACTCCACCCCAGACAAGATATTTCGCTACTTCGCCACCCTGAAGATCATCAGCGAGCACGGAGACGCCGAGGTGTACATGACACCGCAGGACTTCGTGCGCTCCATCACTCCCAATGAGAAACAGCCAGAAAaCCTTGGTCTAGATCAGTTTGTGGTGAAACGCTATGATGGAAAGGACTTCTGGCAGAAGATCTCTCAGGACAGAGAGAAGTTTGCAGACGAGGACAGCATTTTCTACACACTAGGGGAGTGTGGACTCATCTCTTTCTCTGACTACATCTTCCTCACAACCGTCCTTTCCACTCCTCAGAGGAATTTTGAAATCGCCTTCAAGATGTTTGACTTGAACGGAGACGGAGAAGTCGACCTTGAGGAGTTTGAACAAGTTCAGAGTATTATTCGTTCTCAGACCAGTATGGGCATGAGACACAGAGATCGCTCCACCACAGGAAACACGCTGAAAACAGGAGGCTGCAGTTCAGCCCTCACCACCTACTTTTTTGGGGCCGACCTGAAGGGCAAGCTCACCATCGGCAGTTTTTTGGAGTTTCAGAGGAAATTACAGCATGATGTGCTAAAGCTTGAGttTGAGAGGAATGATCCAATGGATGGCAGGATCACAGAGAAGCAGTTTGGGGGAATGCTGCTGGCCTACAGTGGCGTTCAGTCTCGCAAACTCAAACAGATGCAGAAGAACCTCAAAAGGATGTTCAAGGATGCTCAGggcatCACGTTTGAAGAAGTGGAGAACTTCTTTACCTTCCTCAAGAATGTTAATGATGTGGACACCGCGCTGAGTTTCTATCACATGGCAGGCGCCTCGATAGATAAAGCCACCATGAAGCAGGTAGCCCGCACCGTGGCCAAGGTGGAGCTGTCTGACCATGTGTGTGACGTGGTGTTTGCGCTCTTCGACTGTGacgGAAACGGGGAGCTGAGCAATAAGGAGTTTATCGCCATCATGAAACAGCGTCTGATGCGTGGGCTGGAGAAGCCCAAGGATATGGGTTTCACCCGGCTGGTGCGCGCCATGTGGAAGTGTGCTCAGGACACAGCCTGGGACTTTGCTATGCCCAAACAGCAGTAACGCCCGTCCGTTGATGTTTACGCTCCATATGGagtataattaatcattaaaggACGAACTCGTTTGGAAGGCGCATGCCTAGATGACTACAGCTCATCCTCGGGCCTTCTGTGCCCTCTACTCTACTCAACATCCAGAGCTCACTATCTTCTATTTATTTCATGCCGTCGGCCTTTTTCGGAGTTGAATGCACAATTCTACATACACTAGAATGTGACTGTAGCATGTAAAAAACACAAGAGCGAGAGGTCATCATCAAGTGCCATTGGTCTGAAACTAATGTTAGGACTTACTCAgataattcatataatattcAGCTTTAATTTCGAAACGCTCACCATCGCTTGTTCAGCAGAACGATCCTTATTTTGCACTCCTGTTGTCAAATGTATCTCAGTGTCCACTTCAGAATGGAATTATTAGCATCCGGTGACAACAAGCAATCTCCATTTTGTTATAAGCTGCATTAATGTTTTGGAAATCTCATTGTTGAATGGCTTTATAAGAGTGATGCTGAAAGAATGatactattaaaacattttacatta
>XM_043254694.1
TGACGTTCGCTGTGGGGTGTGTTTGCGCTCGGCCTCCGTAGACGCGGAACTTCAGCGGAGACTGCCGTTAACGGAGAACCGGAGGAGAATCTATAGCCTTTGTTGAAGAAATCTTCCGTGCAGGACTTTAACTGAGATCGCCTGAAGTGTCAGATATGTACCGCTTGCGGGCGCTGACGGCCGCCACCGTCGGGATGGTGCAGTTGTCAAGACGCCATCACACCGGTGCCTTCCGTTCCTATCAGCGGCGCAGACTGATGCTGGCTGCCCTGGTGGGGGTGACGGGCGTCTCAGCCAGCACTGGACTACTGTGGTCAAGAGCACACGCAGAGGCGGGGTCTTCGGTCAAGCATGAGGAGCagatgaaggaggaggagcctcTGAAGGATGTGGATGAGGAGGCGGAGTCGGACGGCGCACTCGAGTCGAGTAGCGGGGGAGAAGATGATGAGGCGGGCTCAgaagggaagaaaaagaaacaacgaGTCGGCTTCCGTGACCGCAAGGTGATGGAGTATGAGAACCGGATTAGAGCTTACTCCACCCCAGACAAGATATTTCGCTACTTCGCCACCCTGAAGATCATCAGCGAGCACGGAGACGCCGAGGTGTACATGACACCGCAGGACTTCGTGCGCTCCATCACTCCCAATGAGAAACAGCCAGAAAaCCTTGGTCTAGATCAGTTTGTGGTGAAACGCTATGATGGAAAGACAGAGAAGATCTCTCAGGACAGAGAGAAGTTTGCAGACGAGGACAGCATTTTCTACACACTAGGGGAGTGTGGACTCATCTCTTTCTCTGACTACATCTTCCTCACAACCGTCCTTTCCACTCCTCAGAGGAATTTTGAAATCGCCTTCAAGATGTTTGACTTGAACGGAGACGGAGAAGTCGACCTTGAGGAGTTTGAACAAGTTCAGAGTATTATTCGTTCTCAGACCAGTATGGGCATGAGACACAGAGATCGCTCCACCACAGGAAACACGCTGAAAACAGGAGGCTGCAGTTCAGCCCTCACCACCTACTTTTTTGGGGCCGACCTGAAGGGCAAGCTCACCATCGGCAGTTTTTTGGAGTTTCAGAGGAAATTACAGCATGATGTGCTAAAGCTTGAGttTGAGAGGAATGATCCAATGGATGGCAGGATCACAGAGAAGCAGTTTGGGGGAATGCTGCTGGCCTACAGTGGCGTTCAGTCTCGCAAACTCAAACAGATGCAGAAGAACCTCAAAAGGATGTTCAAGGATGCTCAGggcatCACGTTTGAAGAAGTGGAGAACTTCTTTACCTTCCTCAAGAATGTTAATGATGTGGACACCGCGCTGAGTTTCTATCACATGGCAGGCGCCTCGATAGATAAAGCCACCATGAAGCAGGTAGCCCGCACCGTGGCCAAGGTGGAGCTGTCTGACCATGTGTGTGACGTGGTGTTTGCGCTCTTCGACTGTGacgGAAACGGGGAGCTGAGCAATAAGGAGTTTATCGCCATCATGAAACAGCGTCTGATGCGTGGGCTGGAGAAGCCCAAGGATATGGGTTTCACCCGGCTGGTGCGCGCCATGTGGAAGTGTGCTCAGGACACAGCCTGGGACTTTGCTATGCCCAAACAGCAGTAACGCCCGTCCGTTGATGTTTACGCTCCATATGGagtataattaatcattaaaggACGAACTCGTTTGGAAGGCGCATGCCTAGATGACTACAGCTCATCCTCGGGCCTTCTGTGCCCTCTACTCTACTCAACATCCAGAGCTCACTATCTTCTATTTATTTCATGCCGTCGGCCTTTTTCGGAGTTGAATGCACAATTCTACATACACTAGAATGTGACTGTAGCATGTAAAAAACACAAGAGCGAGAGGTCATCATCAAGTGCCATTGGTCTGAAACTAATGTTAGGACTTACTCAgataattcatataatattcAGCTTTAATTTCGAAACGCTCACCATCGCTTGTTCAGCAGAACGATCCTTATTTTGCACTCCTGTTGTCAAATGTATCTCAGTGTCCACTTCAGAATGGAATTATTAGCATCCGGTGACAACAAGCAATCTCCATTTTGTTATAAGCTGCATTAATGTTTTGGAAATCTCATTGTTGAATGGCTTTATAAGAGTGATGCTGAAAGAATGatactattaaaacattttacatta
>XM_043254695.1
TGACGTTCGCTGTGGGGTGTGTTTGCGCTCGGCCTCCGTAGACGCGGAACTTCAGCGGAGACTGCCGTTAACGGAGAACCGGAGGAGAATCTATAGCCTTTGTTGAAGAAATCTTCCGTGCAGGACTTTAACTGAGATCGCCTGAAGTGTCAGATATGTACCGCTTGCGGGCGCTGACGGCCGCCACCGTCGGGATGGTGCAGTTGTCAAGACGCCATCACACCGGTGCCTTCCGTTCCTATCAGCGGCGCAGACTGATGCTGGCTGCCCTGGTGGGGGTGACGGGCGTCTCAGCCAGCACTGGACTACTGTGGTCAAGAGCACACGCAGAGGCGGGGTCTTCGGTCAAGCATGAGGAGCagatgaaggaggaggagcctcTGAAGGATGTGGATGAGGAGGCGGAGTCGGACGGCGCACTCGAGTCGAGTAGCGGGGGAGAAGATGATGAGGCGGGCTCAgaagggaagaaaaagaaacaacgaGTCGGCTTCCGTGACCGCAAGGTGATGGAGTATGAGAACCGGATTAGAGCTTACTCCACCCCAGACAAGATATTTCGCTACTTCGCCACCCTGAAGATCATCAGCGAGCACGGAGACGCCGAGGTGTACATGACACCGCAGGACTTCGTGCGCTCCATCACTCCCAATGAGAAACAGCCAGAAAaCCTTGGTCTAGATCAGTTTGTGGTGAAACGCTATGATGGAAAGAAGATCTCTCAGGACAGAGAGAAGTTTGCAGACGAGGACAGCATTTTCTACACACTAGGGGAGTGTGGACTCATCTCTTTCTCTGACTACATCTTCCTCACAACCGTCCTTTCCACTCCTCAGAGGAATTTTGAAATCGCCTTCAAGATGTTTGACTTGAACGGAGACGGAGAAGTCGACCTTGAGGAGTTTGAACAAGTTCAGAGTATTATTCGTTCTCAGACCAGTATGGGCATGAGACACAGAGATCGCTCCACCACAGGAAACACGCTGAAAACAGGAGGCTGCAGTTCAGCCCTCACCACCTACTTTTTTGGGGCCGACCTGAAGGGCAAGCTCACCATCGGCAGTTTTTTGGAGTTTCAGAGGAAATTACAGCATGATGTGCTAAAGCTTGAGttTGAGAGGAATGATCCAATGGATGGCAGGATCACAGAGAAGCAGTTTGGGGGAATGCTGCTGGCCTACAGTGGCGTTCAGTCTCGCAAACTCAAACAGATGCAGAAGAACCTCAAAAGGATGTTCAAGGATGCTCAGggcatCACGTTTGAAGAAGTGGAGAACTTCTTTACCTTCCTCAAGAATGTTAATGATGTGGACACCGCGCTGAGTTTCTATCACATGGCAGGCGCCTCGATAGATAAAGCCACCATGAAGCAGGTAGCCCGCACCGTGGCCAAGGTGGAGCTGTCTGACCATGTGTGTGACGTGGTGTTTGCGCTCTTCGACTGTGacgGAAACGGGGAGCTGAGCAATAAGGAGTTTATCGCCATCATGAAACAGCGTCTGATGCGTGGGCTGGAGAAGCCCAAGGATATGGGTTTCACCCGGCTGGTGCGCGCCATGTGGAAGTGTGCTCAGGACACAGCCTGGGACTTTGCTATGCCCAAACAGCAGTAACGCCCGTCCGTTGATGTTTACGCTCCATATGGagtataattaatcattaaaggACGAACTCGTTTGGAAGGCGCATGCCTAGATGACTACAGCTCATCCTCGGGCCTTCTGTGCCCTCTACTCTACTCAACATCCAGAGCTCACTATCTTCTATTTATTTCATGCCGTCGGCCTTTTTCGGAGTTGAATGCACAATTCTACATACACTAGAATGTGACTGTAGCATGTAAAAAACACAAGAGCGAGAGGTCATCATCAAGTGCCATTGGTCTGAAACTAATGTTAGGACTTACTCAgataattcatataatattcAGCTTTAATTTCGAAACGCTCACCATCGCTTGTTCAGCAGAACGATCCTTATTTTGCACTCCTGTTGTCAAATGTATCTCAGTGTCCACTTCAGAATGGAATTATTAGCATCCGGTGACAACAAGCAATCTCCATTTTGTTATAAGCTGCATTAATGTTTTGGAAATCTCATTGTTGAATGGCTTTATAAGAGTGATGCTGAAAGAATGatactattaaaacattttacatta

Function

symbol description
micu1 Predicted to enable calcium ion binding activity. Predicted to be involved in calcium import into the mitochondrion and positive regulation of mitochondrial calcium ion concentration. Predicted to act upstream of or within calcium ion transport. Predicted to be located in mitochondrial inner membrane and mitochondrial intermembrane space. Predicted to be integral component of mitochondrial membrane. Predicted to be part of uniplex complex. Is expressed in female organism; heart; and heart tube. Human ortholog(s) of this gene implicated in myopathy with extrapyramidal signs. Orthologous to human MICU1 (mitochondrial calcium uptake 1).

NR:

description
calcium uptake protein 1, mitochondrial

GO:

id name namespace
GO:0070509 calcium ion import biological_process
GO:0051560 mitochondrial calcium ion homeostasis biological_process
GO:0006851 mitochondrial calcium ion transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0032592 integral component of mitochondrial membrane cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K22827 MICU1; calcium uptake protein 1, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254692.1 True 2179 mRNA 0.50 14 23183915 23238517
XM_043254693.1 False 2173 mRNA 0.50 13 23183915 23238517
XM_043254694.1 False 2167 mRNA 0.50 13 23183915 23238517
XM_043254695.1 False 2161 mRNA 0.50 12 23183915 23238517

Neighbor

gene id symbol gene type direction distance location
mrps6 LOC107717855,LOC107702688,LOC107660242,LOC107754760,LOC107575615 coding downstream 15012 23167873 ~ 23168903 (-)
LOC122356317 psap,LOC107575616 coding downstream 16824 23157102 ~ 23167091 (-)
c1d c1d,LOC107551342,LOC107754748,LOC107717833,LOC107702672,LOC107660245 coding downstream 47273 23134818 ~ 23136642 (-)
LOC122356266 LOC107671403,LOC107756883,LOC107688264,LOC107592480,LOC107592170 coding downstream 364458 22802718 ~ 22819457 (-)
LOC122356263 ypel5,slc30a10,slc30a1b,LOC107568027,LOC107672346,LOC107601641 coding downstream 694592 22485289 ~ 22489323 (-)
pla2g12b pla2g12b,LOC107702679,LOC107551354,LOC107564523,LOC107660215 coding upstream 86265 23324782 ~ 23329933 (-)
pde10a pde10a,LOC107754764,LOC107717825,LOC107564529 coding upstream 94303 23332820 ~ 23416851 (-)
tbxtb tb,t,LOC107717823,LOC107660241,LOC107564521,LOC107702670,LOC107572025,LOC107750753 coding upstream 186515 23425032 ~ 23429064 (-)
prr18 prr18,LOC107750748,LOC107702669,LOC107717824,LOC107660240,LOC107564522 coding upstream 205662 23444179 ~ 23446166 (-)
sft2d1 sft2d1,LOC107660214,LOC102776618 coding upstream 208816 23447333 ~ 23464851 (-)
G96117 NA non-coding downstream 5819 23176802 ~ 23178096 (-)
G96108 NA non-coding downstream 29420 23152205 ~ 23154495 (-)
G96061 NA non-coding downstream 154015 23017198 ~ 23029900 (-)
G96060 NA non-coding downstream 176452 23006279 ~ 23007463 (-)
G96044 NA non-coding downstream 349503 22833829 ~ 22834412 (-)
G96254 myom2,LOC107566060,LOC107660212,LOC107702662,LOC107717844,LOC107572023 non-coding upstream 300261 23538778 ~ 23542300 (-)
G96265 NA non-coding upstream 688814 23927331 ~ 23928060 (-)
G96279 NA non-coding upstream 804011 24042528 ~ 24067735 (-)
G96286 NA non-coding upstream 831643 24070160 ~ 24070488 (-)
G96295 NA non-coding upstream 868916 24107433 ~ 24107818 (-)
G96053 NA other downstream 188316 22994037 ~ 22995599 (-)
G96036 mios,LOC107688218,LOC107592123,LOC107592481,LOC107671474 other downstream 360656 22821981 ~ 22823259 (-)
LOC122356262 stk32c,LOC107570736,LOC107708193,LOC107670801,LOC107653186,LOC107717191 other downstream 735904 22371567 ~ 22448011 (-)
G95972 NA other downstream 761046 22420936 ~ 22422869 (-)
ypel5 ypel5,slc30a10,LOC107568027,LOC108441457,LOC103458748,LOC102788175,LOC102210471 other downstream 854623 22326705 ~ 22329292 (-)
si:ch211-130h14.4 LOC107660236 other upstream 191129 23429646 ~ 23444063 (-)
borcs7 borcs7,LOC107695248,LOC107585367,LOC107588662,LOC107716326 other upstream 1104232 24342749 ~ 24344657 (-)
fgf8a fgf8a,LOC107673879,LOC107585369,LOC107696243,LOC107588741,LOC107716294 other upstream 1160606 24399123 ~ 24404715 (-)

Expression


Co-expression Network