LOC122356249 (LOC107686530)


Basic Information

Item Value
gene id LOC122356249
gene name LOC107686530
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 20955467 ~ 20997713 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254782.1
acacacaatagtttcctgtaaggagcagaacaataacacatagtCTGTACTTAATGTGAAACAGTACACTTGACTTATTTGTAAGGATTTACGACAGGCAGGCGCCCTTTCGCTATCTTAGTTGCTTTAAAGAGCTCACAGAGACGCGTTATGGCAGATATTTTAAGGGAACGCGTTCATGACGCATACGCGCGTCACGATGACGAGCAAATATAAAGATTAACGCGTCTGCGCGCGGCGGACCGAAGGCGGAGGTTCCTGCGCGCGCCTGCCGTTGCCATGACAGCACAGTTAGTAAACTCCCCCGTTACCGCGCTGCAGCAGGGCGCGTGACGCTCCGTGACGCGTCGCGCGCGCTGCTCGTGCGGACCGACCGAGAGGATCAGAGGAACCGAGCCGCGGCGCGATGGGAACCTTCCGGAGCGCGGAGCTCTGTCtggatgaggaagaggaagaggagaaaaaGCGCCGGGAAGTTGAGCGTCTTCCTCCTCTGCTCGAGGACGAGgaGAACGTGTCTCTGGCTGACGTTGTGTGTCTGCGGGACGGTGGGCGCTCGGAGCAGGAGCTGTGGGcggtgtgtgtggagtgtgttcGTTCTCTCCAGAGCGTCGCCCTCTCGCCGCTCTTTCACACCCTCTGCGTGACGCCCGATACGCTGGCCTTCAACGCTCACGGTAATGTGTGCTTCATGGAGCAGCTCAGCgacGATCCCGAAGGCTGTTTCGTTCCTCCAGAGCTGGATAAGACCGGAAGCACGTTTgagggtcACATGTTCTCATTAGGCTCCACCCTGTGGGCGGCGCTGGACTCTGTGGAGGCGGAGCTGAGTGAAGAGAGCAGGTGTTTTCTGAAGCAGATGCAGCGAGAGAAAGCTGAAGATCGACCAGGACTCCAGGACGTTCTCTCTCGGGCGGAGGCTGTGCTCGGAGACGTCTCGTCCGCATCCGTCTGCCGCAAGCTGTCTGCCATCGGCCGAAGAGTCCTGTCCATCGAGTCCATCGCTGCTCTGCAAGATGGATGGGAGAGATCCGATCTTCAGTTTATGGATCACAAGGCCTGGAGATCAAACTCCACGGAGAATCCCGCCGGCGATCGCAGCATGATTCGAAACTACTCTGCTGATTCGTACGACGGCGAGGATCTGCTGCTGAGACGCAGGGGTCAGCTCTGTAACGGCTCCCCGTGGTCCGGAGGTTCGGACAGCAGGTCTCAGAACAGTTCTCCGGTACACAGGAGGAGTCAGGAGAGGAGGCCCGGGAGAGCCGGGAGAGCCCTGAACCGTTCCTGCTCGGTGCCGGACTCCAACAACCCCCCGGCCCTCAGCCCGCCGTCCCACGCTCCCATCAGCACGATGATGGCCGACCTGTCCGACATCACGGAGGAGGAGAGCTGGAGCGGCAGACTGAGACGGCCCAGAGCCAGGGAGGACCAGGACTCCACGGCTGAACCCGACGCATGCGAGACGGACCAGAGCCAAGCTGTAGACACGAACCAGTACAAATCCAACCACTTCAACAAAACTGTGCTGTGCCTGAATGAGGAATCTCACAATCAGTGGATCTCTTTGCGCGAGCTGCTCTCGTGTTCTGGTCAGCCGTTCTCGGTCAGTGAGCTCTGGGCTTTATGCTACACGTGTCTCTCCACGCTACAGACATATATCGACCTCCCAGACTATCTGTGTCTGGACTCTGTGTACGTGGGACGTGAAGGAGAGATGCTGTTTCTGAGACCCAAAAACTCAGCCTCCTGCGATGCATTTTTCCTGGCTCCTGAGTTTCAGGAACACGGGATCGTGACGGAAAAGGTTTGTCGCTGTCTAGTAGTTGTGGCGTGTTCGGAGGAAGGTGATTTCGAGTGTGTTTCTGCTCGTCTCCAGGCGTGTGTGTACGGCGTAGCGGCTGTCCTCTGGGCTACAGCCAAGTTTCATTTGTCTCCCGGACAAAAGCTGGCCATGCCCAGAAAGCTCAAGAGACTTCTGCTTGAGATGGCCAAACGGACTCCGATTGAAAGACCTTCTATTGAAATGGCGAAAAAGGCGTGCCGCGAGTACCTCTCCCGTCAGGGAACGAACGCCGAGAGCGTCTGGACGCAGATCATCAGCCGAGTTCACCAGGCATTGGATGGGAATAGAGATACAGAGGAATCATCTTCTCCTGAGTCTGAGCCACACTTGGGAGAAGTTCAGACAGgTTTCGTGCCGTTGGCCGGCGAGGGCCGTTTGGAGCCTGTAGCTGGTCCAGTTCCTCATCATTACCCAGAATCCTCCAGCAGCGTCAGACTGCTTTATAAAAGGCCTTCATCTGTCTATTTGACACACATTTCACTGACTTTTTCTGAATTGTTTTCGGTCAGAGGAGGCTCTGTTGAAGCAGATGAGCAGGACGAGAGCGGCGCTGAGGATGATGGGACGGTTTATTCATCATCATCCAGCCATAAGACTCCAGCGACTCCACAGAAAACCCATCAAGAAACAGACGGCCAGCCTCCCTTCCCTGCCTTGTCTTGTTCTAATGGGGCTCGCAACAACTTCCTGCTGCAGCAAGACCCGCTGACGGGAAGTCTGACCCTACTTCCTGTTCAGATCGCCGTgcttcagccaatcacaggccCGGATCACGCAGCTCCTGCTGACGCTGGGAATGAAAGCGTGTTTGTGAGCCGCAGAGACTGTCTGCAGAACATCATGGAGCTCCTCAGAGAACAGGGCGCCTCTGATGATAGTCATCAAGTCCAACATCTAGCTATgggtgAATACATCTTCTCTTTAGAAACGCTCCGGTTTGAGACCTTTTGTCGAGCGATAACGGAGAAGTTCAGGGCTCTGTTCTGGGACGAGAAGCTTCTGCGGGACCTGCACCGTCTGATCAATCAGGGTTCATGCCCACGcgtcTCTGATGATCAGTCCTCCTCAAAGGCAGTGGAAAGCGCCAGACAGCGTCCGTCCAGCGAGGAAAACACGGCTCTTGACCACAATGCAAACCTCTGGCCTTCGCAGCTGAACGAGATGAAGAAAGAAGAGGAACCGAACGAGTTTAAAGACGGAGCAGAGAAACAAAACACGGAGGAGACGCGCTGGAGACGGGAcccacaggaagtgacatcagaGGATGACAGCAAAGagctGATGGATCTGCTGGCTCCAGACGGTGGTGCTGCTGAAGCTCCTGACCGCTCGGAGCCGGACGCAGATGACTGTGACTCAGTGATGTCTGAGCGGACGCTCTCAGGCTGCAGCGGCCCTCGGCGGGCCCCGGGCCGCTCCTGGGCTCTGGCTCTGTACGGGGACGAGTGCTTCGGTCCGGACGTGCTGGAGTACACACAGAAGCTGAGCGGTCACAGCCAGACGCCCACGCTGGAGGACAAGTCACAGGACCCTCATTTCATAGAGCCTGAGTTTTTCCAGGAGCTTCACCAGCAGCTGATTATCGAGAGCAGAAATCTGAAAAAGACCAGCATGTTCTACCACAAGCTGATTCAGCAAGAGAGGAAAAATAAAGGTTCAGACACGAAGGCGATGGCGTCTAAAGTCAAGCTGCAGTTTGACGAACTCAGAGAAAAAGTGGAATTTCTGCAGTCTGTCCAGAAATATCTCCAGGTGTTGTCTGTGGATCAGTGGGGTTTAGCGCTCTCTCTGCTGCCCTCTCTGGCTGTGTGTGGAGCTGTGTCTCTGGAGCTGCAGCACTCGGACGATCCTGCTCTTCTGCACATTCTTTGTGAGCAGCGCCGGGGCAAAGGCTGCCCGCTAGTGACCGCCACAGCAAGAGGCTTCATGGCCTACCTGTACGCCAGGAATGCTCACATCGAGGGGTTTATTCGGCAGTTTTTCTACACGTACCGCTACTTCTGCACCCCAGAGGAGCTTCTGCAATTTCTCATGGACACATTCAACAGCACACTGGGAGCGGGTGAAGATCCCTCGTCAGACCGAGCTAAAGTCTATCAGCGCACTCTGGATTTATTACACTTCTGGATTGAAGACGCTCAGTTAGTGGACTTCAGCTCCAGCCTTCTGCAGACGCTCCACGCTTTCCTGACCACGCAGGTGTCTCCGGTGGACGGTCGAGGAGAGAGTTTGCTCTCGGCGCTGCAGAGCTCGCCCTGCAGGAGACACGTCTGTGACCCGTCGTGTGTGTTTGACCCCTCCATCAGCGACCGGAAGCTCTCCGTCAGCTCGCCCGCAGAAGATACTGCTCCAAAGGGTTTCCAGCCTCAGACGCTCCCGAGCAAAGACAAGGTCTTCTCCATCGCTGCGGCTCTTCCTCGGCCGTGTTACGCCTCTCTGATGagtctgagatcagacgagagaCGTCCCTTCAGTCAGAGCGAACACACAGCGCTGAGCATCGGCCAGCAGCTCACCTTACTGGAGCAGGAAATCTTTCAGGACTGTCATCCGGTTCACTTCCTGAACTCAAGAGCTCATGGAGTGACAGAAAACTCTGGAAACATATCCAGGTGTGTGTCTCCGCTCTCCTCGCCTCTAGAGGGCAGCGACGCGTCCGGGCCCCAGGGGCCCCTGCAGAGGCTCCTCACGCACGCAGACTGTGTCTCCAACTGGGTTTCTGCTGAAGTCGTGGTCTGTGACTCGGCCAAGGCCCAGGCGTCTTTGCTCGCCCGCTTTCTCGCCGTTGGCAAGTTCTGCTACGAGACGAGGAACTTCTCCACAGCCATGCAGATTCTGTCAGGCCTGGAGAACGTGATTGTGAGGCAATTACCGGCCTGGAAGCATCTCTCTCTGAAGGTGTGTGAGGTTCTGGAGGAGCTCAGGGCTGTGCAGGTGTTTCTGAAGAGTGACAGTCTGTGTCTGATGGAGGGAGAGAAGGGCAGAAGACGGCCGACTCTCCCAGACGCTCAGATCCTGGCCTTACACGTCCAGCAGCTGGAGATCGGAGCGTTTACCGTGACCAGCGGAGCCTACAAGTGGCCCAAACTCAGGAACATTGCGCGTGTGGTCAGTCAGGTCCACGCCTTTCAGGAGCGTCTCTATTCCTACCCTCCTGACCTTGAGCTGCAGTCGTATCTGCGTGGGAGAATCGCTCGCTCCGGCAGATGTGACATCCTGCTCCTCGCCTCCGACAACCACATCAACTTCAGCCAGACGCCCGCAGCTCGCCGGATCCACGACACGCTGCGCCGCGTCAAAGCGTCTTTCCAGTGACCAGAACAGATGTGCAACGAGCCAGAGCTGCAGTGACCGAGAGAGCGGCGCGCTGGaacttgaggaaaaaaaacagatagaaAAAAACCACCTGCACACTATGAAAACATCTTAATCTGTTTGACAGCACGCGTACTGCAAGTAAacactgcacaaacaaacaggcTGCAAATACACGCCACAGAAACAAATACTCACCACGCAAACAAATACTTCAGAAACAGAAACATGTTGAAAATactcacaaaacaaagaaatacaaacacgctgaaaaaacaaatactcaCAGCGCAAACAAACACcctcaaaaacagaaacacacggcaaatacatacaaaataaacaaatgcaaaaacagaaatgtgcaGAAAATCCAACACAAACACGCTGCAAATACTCACCACAGAACAAATACTCACCGcgcaaacaaatacaaacatgctgaaaatactcaatatacaaacaaatactcacaacacaaacaaatagactct

Function

NR:

description
PREDICTED: protein very KIND-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254782.1 True 5655 mRNA 0.55 30 20955467 20997713

Neighbor

gene id symbol gene type direction distance location
vox vox,LOC107750144,LOC107689360,LOC107580632 coding downstream 5769 20947987 ~ 20949698 (-)
vent NA coding downstream 8942 20944584 ~ 20946525 (-)
blnk LOC107750133,LOC107728331,LOC107689749,LOC107689365 coding downstream 268547 20662202 ~ 20686920 (-)
ccnj ccnj,LOC107689370,LOC107565073,LOC107728310,LOC107750147,LOC107689765,LOC107750154 coding downstream 303912 20645694 ~ 20651555 (-)
herc4 LOC107689351,LOC107750134,LOC107689752,LOC107728328 coding downstream 310129 20624977 ~ 20645338 (-)
LOC122356507 LOC107708201,LOC107658777,LOC107554523 coding upstream 30052 21027765 ~ 21042154 (-)
LOC122356506 LOC107689349,LOC107663567,LOC107750141,LOC107720869,LOC107570923 coding upstream 212105 21209818 ~ 21254638 (-)
LOC122356942 LOC107689348,LOC107663569,LOC107750139,LOC108426858,LOC562831,LOC108262825,LOC107567011,LOC105926138 coding upstream 271637 21269350 ~ 21323003 (-)
trnag-gcc_70 NA coding upstream 416087 21413800 ~ 21413871 (-)
trnag-gcc_71 NA coding upstream 576538 21574251 ~ 21574321 (-)
G95623 NA non-coding downstream 28724 20847297 ~ 20926743 (-)
G95549 NA non-coding downstream 126414 20828778 ~ 20829053 (-)
G95535 NA non-coding downstream 277198 20621262 ~ 20678269 (-)
G95537 NA non-coding downstream 334748 20620047 ~ 20620719 (-)
G95524 NA non-coding downstream 435374 20518600 ~ 20520093 (-)
G95641 NA non-coding upstream 1327 20999040 ~ 20999265 (-)
G95642 NA non-coding upstream 3624 21001337 ~ 21001844 (-)
G95643 NA non-coding upstream 4914 21002627 ~ 21003651 (-)
G95715 NA non-coding upstream 489801 21487514 ~ 21495153 (-)
trnag-gcc_72 NA non-coding upstream 655899 21653612 ~ 21653681 (-)
G95526 NA other downstream 383905 20570038 ~ 20571562 (-)
G95511 NA other downstream 458603 20493642 ~ 20496864 (-)
G95510 nid1,nid1a,LOC107691203,LOC107750138,LOC107728305,LOC107689759 other downstream 463391 20488785 ~ 20492076 (-)
G95520 NA other downstream 468763 20479925 ~ 20486704 (-)
LOC122356211 gng4 other downstream 680081 20264726 ~ 20275386 (-)
G95646 adgra1,LOC107750141,LOC107567015,LOC107663568,LOC106903219,LOC107720869 other upstream 9759 21007472 ~ 21180217 (-)
LOC122357128 NA other upstream 1139675 22137388 ~ 22143970 (-)
tmem254 LOC107689576,LOC107653189,LOC107742085,LOC107711410 other upstream 1154029 22151742 ~ 22156859 (-)
klc1b klc4,LOC107742075,LOC108263390,LOC106963894 other upstream 1233736 22231449 ~ 22250313 (-)
G95932 NA other upstream 1238391 22236104 ~ 22238570 (-)

Expression


Co-expression Network