slc25a28 (slc25a28,LOC107601050,LOC107747263,LOC107719215,LOC107665596)


Basic Information

Item Value
gene id slc25a28
gene name slc25a28,LOC107601050,LOC107747263,LOC107719215,LOC107665596
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 15714193 ~ 15723743 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254818.1
AGAGGGCGTTTCCGTTTCCCCTCGCGGCCTGTTCTGTCGGTCACCGCCTGCTGCGCAGTTCTAGCCGAACGGGACGCGTCCTCTCCCCGGTGCGCAGGCGGGAGAGGCCCGAGCTGAACGCGTAAACATCAGGCGTGGGACGCATGATTTTAAAGGACCGGGTGCTCCAAATGGAAGCGGATGGTTTTGTGCGCAGGCGGCGGATGACAGCGGACACGTCGGGCGGCGATGCCGCGGTGGCCGGAGCTTCCGCGGGCGCGGAGATACACTGGCTCGGCGGCAGGTTCTGGGGTGTTTCCGAGAGCCTCGTCGGCACTTTGACACCTCGGATAGCAGGAGAAACAGAGCTTCATGTTGGACATTTCTACGCCTCCCAGGAGGCCAATGATTTATCGGAACCGGACTATGAGGGTCTGCCCCAGGGCGCCTCCACCAGCACGCACATGTTGGCAGGGGCAGTGGCAGGAATCATGGAGCATTGCCTGATGTTCCCTATTGATTGTGTGAAGACACGCATGCAGAGCCTTCAGCCAGAGCCAGCTGCCCGCTACCGTAACGTGATGGACGCTTTGTGGCGAATCGTGAGGACGGAGGGAATCTGGAGGCCAATCAGGGGTCTGAATGTTACAGCTGTAGGGGCGGGTCCAGCCCACGCACTTTACTTCGCCTGTTACGAAAGGTTGAAAAAGGTCCTCAGTGATATCATCCATCCGGGAGCGAACAGTCATTTGGCGAACGGGGCTGCTGGATGCGTTGCCACATTGCTTCATGATGCTGCAATGAATCCAGCTGAAGTGGTGAAGCAGAGGATGCAGATGTATAACTCGCCATACCGTGGCGTTCTGGACTGCATGCGCTGTGTGTGGCAGCAGGAGGGGGCTCTGGCGTTTTATCGCAGCTACACCACGCAGCTCACCATGAACGTCCCCTTCCAGGCGTTGCACTTCATGACCTACGAATATCTGCAAGAGCTGCTGAACCCCCAAAGACATTACAACCCCTCCTCCCACATGGTGTCGGGTGCGCTGGCCGGCGCCATAGCCGCCGCCGCCACCACGCCACTGGACGTTTGCAAGACGCTGCTGAACACGCAAGAGTCTCTGGCGCTCGATTCGGTCAGCCAGAGCGGAAGACACATCACGGGCCTCGGCCATGCCTTCCGGACTGTCTACAGGCTTGGCGGCCTTCCCGCTTACTTCAAAGGCGTTCAGGCCAGGGTCATATACCAGATGCCCTCGACTGCCATCAGCTGGTCCGTCTACGAGTTCTTCAAGTACGTTCTCACCAAACACCAGCACGAGAAGCGCAGGCTCCAGAGGGACGGAGAGAAGTAAGCGCTCGCAGCTGGCCTGACCTTGGCTTTCTCTCGCATAACCAAGCACTCGAGCTGCAAAAGGACCGATTTAATAAATGATACGCACATATAGAGTCCAAACACTCATGTCTGTTTACTTCCTTTGAGACGGCATTTAATACTGAAACTTTCCTGTATAATTCAACTATTAATCATGACCTAAGTTCTCACTGTGAAGGCTCAAGTTTTTGTTCATGACATCCTATTTTGCACTTAACCCAAATTACACCTCCCACAAGAGGGCGTCAGAGGTCTCTTTAAACGTTGTATGCTAATGAGTGGGAGGTCCTTCAAGTTTGTGGGTGGAGTTTAGAACCTCCAGACTCCTCCAATTCTTAAAACAGTACCTAGAACAGCAGACctgatctttttctttttttttttttttttttacatatttttttttccagccaaAACCGATACGCACAAGTAAAGACATATCTGTACATTCAAAATTGGGGTTTTAAACGACATTAAAATCATCATTTATGGCAGAATGTAGAACTGTACAGTAATTTATTGCCTTCTCTGGCTGAATAGCACTCAGAGATAATGAAAGATATCTATTGTTAGAggtatttttgtagtttttggcGGTGGCTTTTCGTCAGCACTTGTGGGAAATGTTCCTGCAGTTGATCCAAAGCTCTGAGGTGGTTGCCCCTTCATAACTTCTAGAAATAGTTTTGAGGTCTCTAGGGGAAGCACCATGCAGACCCGTATAACAGCTTTAGGAAGACACAACAGTCCTTTCTGGCCAACGTTAGTATTATTCAGTCAACAATGCCTTGGACGTTTAAAATTTAGATTAAGATTTAATCTGTTGAGGACCTTCTGAGTAATTCAGTGAATATGAGTTGGTCATTTGGAGTTATTTCTAGATGGACACTGGAATGTATTTTGGTTTGCTCTTGTGTTTGAGAGTTTTGGCTGAAACGCACCTGGCAGTTGAACATCTGAAGAGTTTTATTGATGGATATCTGACTGCCCCTGTTCCTCAGCTTTCAATAAATTAGCAGCGCAGGGGTTTCCCTGGCTTGCAATGGCTGAA

Function

symbol description
slc25a28 Predicted to enable iron ion transmembrane transporter activity. Predicted to be involved in iron import into the mitochondrion. Predicted to act upstream of or within ion transport and iron ion homeostasis. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to human SLC25A28 (solute carrier family 25 member 28).

NR:

description
PREDICTED: mitoferrin-2-like

GO:

id name namespace
GO:0055072 iron ion homeostasis biological_process
GO:0006811 ion transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15113 SLC25A28_37, MFRN; solute carrier family 25 (mitochondrial iron transporter), member 28/37

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254818.1 True 2405 mRNA 0.51 4 15714193 15723743

Neighbor

gene id symbol gene type direction distance location
golga7bb golga7bb,LOC107728443,LOC107702732,LOC107665585,LOC103368019,LOC108247940 coding upstream 106312 15581868 ~ 15607881 (+)
zgc:172136 LOC107665601,LOC107601056,LOC107747271,LOC107664217,LOC107736845 coding upstream 418999 15278360 ~ 15295194 (+)
adgrb3 adgrb3,LOC107664175,LOC107665593,LOC107736840,LOC107747274 coding upstream 703183 14873915 ~ 15011010 (+)
zgc:171579 zgc:171579,LOC107665586,LOC107568696,LOC107736860,LOC107747305,LOC107579559,LOC107664312 coding upstream 871761 14839782 ~ 14842432 (+)
phf3 LOC107665590,LOC107726593,LOC107602981,LOC107736851,LOC107683665,LOC107553234 coding upstream 1083344 14620165 ~ 14630849 (+)
got1 got1,LOC107665595,LOC107601049,LOC107586067,LOC107702745 coding downstream 41211 15764954 ~ 15773545 (+)
hpse2 hpse2,LOC107747298,LOC107665577,LOC107702736,LOC107719234,LOC107586094 coding downstream 73690 15797433 ~ 15861462 (+)
ankrd2 LOC107586109,LOC107747258 coding downstream 153771 15877514 ~ 15888102 (+)
prkg1a prkg1a,prkg1b,LOC107747254,LOC107665604,LOC107702750,LOC108263833,LOC108443637,LOC107586071,LOC103355670 coding downstream 193089 15916832 ~ 15966825 (+)
dkk1a LOC107601033,LOC107665569,LOC107747256,LOC107719231,LOC107702737,LOC107586111 coding downstream 245012 15968755 ~ 15971312 (+)
G94163 NA non-coding upstream 4039 15707116 ~ 15710154 (+)
G94162 NA non-coding upstream 7215 15701427 ~ 15706978 (+)
G94144 NA non-coding upstream 73533 15640257 ~ 15640660 (+)
LOC122356093 NA non-coding upstream 181958 15506993 ~ 15532235 (+)
G94110 NA non-coding upstream 252441 15461373 ~ 15461752 (+)
G94173 NA non-coding downstream 37949 15761692 ~ 15761967 (+)
G94174 NA non-coding downstream 40597 15764340 ~ 15764574 (+)
G94175 NA non-coding downstream 50226 15773969 ~ 15774395 (+)
G94176 NA non-coding downstream 51024 15774767 ~ 15788230 (+)
LOC122356273 NA non-coding downstream 175128 15898871 ~ 15914946 (+)
LOC122356934 LOC107747267,LOC107665602,LOC107601027 other upstream 396016 15314814 ~ 15318177 (+)
tarbp1 tarbp1,si:dkey-85a20.4,LOC107736847,LOC107564676,LOC107683215 other upstream 399537 15295849 ~ 15314656 (+)
fam135a LOC107747270,LOC107665594,LOC107736843,LOC107664195,LOC107564672 other upstream 438959 15255074 ~ 15275234 (+)
LOC122357077 zgc:153049,LOC107747287,LOC107736842,LOC107665562,LOC107664273,LOC107573610,LOC107553186 other upstream 487471 15106458 ~ 15226722 (+)
frmd6 frmd6,LOC107654939,LOC107683538,LOC107736757,LOC107726597 other upstream 1344636 14354115 ~ 14369557 (+)
hps1 hps1,LOC107747297,LOC107665607,LOC107719211,LOC107702747,LOC107586068 other downstream 141096 15864839 ~ 15871816 (+)
G94186 st3gal7,LOC107665608,LOC107601047,LOC107747259 other downstream 149701 15873444 ~ 15877422 (+)
nkx1.2la nkx1-2,nkx1.2la,LOC107601042,LOC107702751,LOC107665606,LOC107586110,LOC107719237 other downstream 177797 15901540 ~ 15904909 (+)
G94324 NA other downstream 792084 16515827 ~ 16518826 (+)
G94378 capn1a,LOC107549131,LOC107676389,LOC107586085,LOC107679188,LOC107734280 other downstream 874038 16597781 ~ 16605383 (+)

Expression


Co-expression Network