LOC122356299 (eml4,LOC107586470)


Basic Information

Item Value
gene id LOC122356299
gene name eml4,LOC107586470
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3881586 ~ 3948955 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254839.1
AGCAGCGAGCGCCGCTCCGCGTCTGAAGGGAAGCTCGCCGTGCCAAAGCAGGCGGAGTCGGAAACGCGAAAGCCCTGCGCTCCTTATACTCCCTCCCCCGCCGGAGGTGTAAACGATCGTGGTGGAGCAGCTCAGGGAGCCGCCGTGATCGACCGCCCCAGAAAAGCGCTGCGTCGTCCGCACGGAGATCCAGCCGCCAGTCGGTCGTCCCGTTGTTCTCGCGTTTAAGCGCATCCGGAGGAGCCGGCGTGGCATTACACCAGCTCTCCCATTTCCTTCTCAAACAGAGGACGAATTCTCCCCCCCTCCCCAGAATTGCACCAGGAATATCTCCCTGGATACTTACCCCAGAAATGGACGGTTTCGCCGGTAGTTTAGATGACAGTATTTCTGCAGCGAGTGCATCAGACGTTCAGGACCGCCTGTCGTCTCTGGAGCTGCGGGTGcagcagcaggaggatgagCTGACGGTGATGAAGGCCGCGCTGGCAGACGTGCTCAGACGTCTGGCTCAGTCGGAGGACTCCGCGGCCGCTGCCAAAAAACAGCAAAGCAGCAAAGGTCAAACCCCGCTGCGAGAGGCTTATTCAATGTCCTGCATTGCCAATGGCGGCTCCAGCGGCCGCAAATCTCACAGAGATAGTTCCACTGTGTCCGTAGCCAGGAAAGAGACGCTCTCCTCCGCCGCCAAGAGTGGCGGCGAGCGGAAAAAAGACAAGCCTCCGATGGAGGGGATCAAGGAGAAAGAGGAGCCGCCGCAGGCTAACGATAAAACCCCCTCAGCGCCCAGCACCCCTCAGGCACCGTCCCCTTCCAAACCCCCTTCCCCTCATCCCCCACAACCCCAAAGACAGCTTTCGGAGAACAAGGGGTCAACCCCGGCCAAAAGGGGTAGCAGTGTGAAGCGTGGAGGAATGGAGCGTTCTCAGAGTAGCACGTGGGACAGCGGAGAGGAGAGCAGGAATAAACTGGTGAAAGCAGCCTCCACCTCCAAACTCCTGTCTAAAGTGGTGAAGAATGCCGAGAAACACAGAGATCCAGTCATCAGCCAAGCTAAAATGTCAACCCGCGAAAAAAACAGTCAAGAGggagaatatattaaaatgttcatgCGAGGACGACCCATCACAATGTTCATCCCATCGGACGTGGAGAATTATGACGACGTCCGCACCGAACTTCCCCCAGAGAGACTCAAACTGGAGTGGGTATATGGCTACAGGGGACGTGACTGCCGTGCAAATGTGTACTTGCTGCCTACCGGGGAGATCGTATATTTCATCGCCTCCGTGGTGGTGCTCTTCAACTACGAGGAGAGGACACAGCGGCACTATTTAGGACACACTGACTGCGTCAAATGTCTTGCTGTTCACCCGGATAAGATCCGCATCGCCACGGGACAGATAGCAGGCGTGGATAAGGACGGCAGGCCGCTTCAGCCTCACGTCAGAGTTTGGGACTCGGTCAGTCTCTCCACGCTGCAGATCATCGGCCTCGGCACCTTCGAGAGAGGAGTTGGATCCCTCGCTTTCTCCAAAGCGgactCAGGCACTCATCTCAGTGTGATTGATGACTCTAACGAGCACATGCTCACTGTGTGGGACTGGCAGAAGAAATCAAAAATCGCTGAGATTAAGACAACCAATGAAGTGGTCTTAGCGGTGGAGTTTCACCCGACCGACGCCAACACCATCGTCACGTGTGGAAAATCACATATCTTCTTTTGGACCTGGAGCGGTTCTTCACTCGCCCGCAAACAAGGCATATTTGGCAAATACGAGAAGCCCAAATTTGTACAGTGTTTGGCCTTCCTCAATAACGGAGACATCTTGACCGGAGACTCAGGAGGAATCATACTGATATGGACCCGCAGCACCGCTGAACCAGCACCAGGAAAAGGGCCGAAAGGAGCGTTTCAGATCTCGCGTCAGATCAAGGCTCACGATGGCAGCGTCTTCACTCTGTGTCAGATGAGGAACGGCACGCTGCTCACAGGGGGCGGCAAAGACCACAAGATCATTCTGTGGGACCACGACCTGAATCCAGAGAGAGACATCGAGGTCCCAGATCAGTATGGCACCATTCGTGCAGTAGCTGAGGGCAAGGGCGAGCAGTTTCTGGTGGGCACTTCACGCAACTTCATCCTGAGAGGCACCTTCAACGATGGATTCCAGGTGGAAGTGCAGGGGCACACAGATGAGCTGTGGGGTCTGGCCACCCACCCGTTCAGAGACCTGTTCCTCACCTGCGCTCAGGACAGACAGGTGTGTCTGTGGAGCTCTGTGGACCACACGCTGGAATGGACCAGACTGCTGGACGAGCACGGGCACTGCGCAGATTTCCATCCTAGCGGTTCGGTTGTCGCCATTGGTACTCACTCAGGGAAGTGGTATGCTCTGGACGCAGAGACGCGAGATCTGGTGGCCATTCATACAGACGGCAATGAGCAGCTGTCAGTGATGCGCTACTCTATTGATGGCACGCTGCTGGCAGTGGGATCACATGATAACTTCATTTACCTCTACACGGTGTCGGATAAGGGACGCAAGTACAGCAGATATGGGAAATGCACTGGACATTCCAGCTACATTACACATCTTGACTGGTCCCCCGACAACAAGTTCATCATGTCCAACTCAGGAGACTACGAAATCCTTTACTGGGACATTCCAAACGGTTGTAAGTTGATTCGTAATCGTTCTGAGTGCAAGGACATCGACTGGGCCACGTATACCTGCGTGCTGGGATTCCACGTCTTTGGTGTTTGGCCGGAGGGTTCGGACGGGACGGATATCAATGCCCTTGTGCGATCTCACAACAGGAAGGTGATCGCTCTGGCTGATGACTTCTGTAAAGTTCACCTATTCCAGTACCCCTGCTCAAGACCGAAGGCCCCAAGCCACAAGTACAGTGCACACAGCAGTCACGTGACAAACGTGAGCTTCATGCACAGAGACAATCACCTGGTGTCAACGGGCGGCAAGGACATGAGCATCATGCAGTGGCGTCTGGTGGAGAAGACCTCATCCTTGGTGCACAGCGACTCCAGCTTGGGCCTGGGTGATTCCCTGCTGCACAACTCCAGCCCTCGCACCCTGCCGACGGTACCCAGCGTTCCCCACACTCCTACTGAGCCCTTGCCGGTGCCAGTCTCTCTTCCCCTCAGCACCCAACCTGACACCAACACTCCCCTCCCACCCCCGAACCCCTGCACACAGACTCCGAATGGACAGCAGGACGGCTCCCCTGAAACCCCGCCCCCTTCAGACGAGGCCACACCCCCATCCGACAGCACCCTGAGCCCCAAGGACAGCCTAGAGCCTAGCGACGATACGGCCACACCCAGTGATGAGGGCACGACCTTTAACCCTCCCTTATAAGGCGTTTCGACCCCCTCCTCTGCTCGATAGCCCGCCCAAAGGCACCAGCATGTCACTGCAGCCTTCCTGTCGGATTACAAAAGCAGGGTCTCCTcagtttttatcttttcttttcgtTTCGTGTCTTAGTTTGTTGTTATGTTGACATTCAGTAGATGTGGCTGCGGAGGCATTGGTTTTGGTTGGATGGTGAGAGATTTGGAATGTGTAATTAAACACCTACAAGTttacacttacacactcacacacacacacactaccacacaaacactaatactacacacatgcacacacacatcagtaactgtgatacattaaaaaaaagacatgaaaacaaACTATTTACCAGTTTTGATGCAAAAACACGCATGTTCGTATAAATAGACAAATACCGTATAAAATGGACACGTGCTTTCAATTTGGCATATACATCgatatacattttgatttaaggATCAGTAACTTTGGGTGAATTAAATACCAAAATCTTTCCACAGtcttcacccaaaactgaacaTTCTGTATCTATTTACGCATTCTCATGTAAATCCAAACCTTGATGACTGACTTTCTTATGTGGAAAAAcagatgtttaataaatgttttgaagatgTTTTGAGGATCTTTTAGAGAATCGCTCCAAAATTCTTTCAAGATCTTTGGAGGATCTTTGGAGATCTTTGGAAGATCTGTTGGAGATCTTTGGAAGATCTGTTGGAAGATCTTTGGAAGATCTGTTGGAAGAAGATCTTTCAAGGGtcttttgaatatgttttttttcccttagaACAAAAGTCATTTGGTTCCCAATTCAGCATTGgactttcttttaattttattcttcaaaatattgtttaatgtgtGAAAGTCAAGTCATaaagggtttggaacgacataaaaTGGAGTAAacgttttgggtgaactacccctttaaatgcgtaaaccttaaaaaaaaaaaagaaatcacatgatgtttatttgtattctaTCGCACTCCGCGAGCATTGTTGGAGGACTGCATGTGAAGTTGATTTGCGTGCTTGCATAGCATCTGTCCCTGAGCCAAAAACTACAGGACATGTATATCTGGTGACACCAGGCAGGTGCCTCTGGCTTATAGGTCAGACTCTCAGACCTCAACAATTCAAGCTGCTTCTAACGGTCGACATGGTCATGGACATCTTGAATTTCAACTTTCCAGAAGAATAGCCATAAACAGCAGAGCGCTTCATTCAGTACAAACAcgagtaacacacacacacaagcctgcGTCAAAATGGGGTCCGCATGGCTATAGCCAagctattttataaataaaacaaacaatttcaGTCTCATCCGCCTGTCTAAAGATGCCGTGCCACCCTCACATCTCTCTCAGTTTCTTCTTTCGGACTGGAGAACCTCCTCTGTATTCATACCATCCTTTTTAGCCGTGCATCCAAATGACTCTCTTCTCACCGAGACTGCattgtttttagatttaattttgggactgtttttcttgttgttttgttcATTGGACTGAgatgttcttgttttttatCTTATGAGAGAAAGGAAAGATTAAACGAGTCTTAAATGtg

Function

symbol description
eml4 Enables alpha-tubulin binding activity and beta-tubulin binding activity. Involved in attachment of spindle microtubules to kinetochore and mitotic metaphase plate congression. Located in cytoplasm; microtubule cytoskeleton; and midbody.

NR:

description
PREDICTED: echinoderm microtubule-associated protein-like 4 isoform X4

GO: NA

KEGG:

id description
K15420 EML4; echinoderm microtubule-associated protein-like 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254839.1 True 4966 mRNA 0.51 26 3881586 3948955

Neighbor

gene id symbol gene type direction distance location
ubr2 ubr2,LOC107669566,LOC107696377 coding upstream 122451 3729913 ~ 3759135 (+)
si:ch73-193i2.2 LOC107728794,LOC107590009,LOC107696375,LOC107739482 coding upstream 152118 3717296 ~ 3729468 (+)
LOC122356793 LOC107669554,LOC107696371,LOC107578696 coding upstream 164292 3713833 ~ 3717294 (+)
LOC122356604 LOC107739472,LOC107565599,LOC107669574 coding upstream 441272 3434523 ~ 3440314 (+)
ncoa4 LOC107739471,LOC107669570,LOC107696383,LOC107728073 coding upstream 454850 3417534 ~ 3426736 (+)
trnai-uau_4 NA coding downstream 122851 4071806 ~ 4071899 (+)
plekhh2 LOC107678558,LOC107707149,LOC107699295,LOC107586497,LOC107590017,LOC107727353 coding downstream 376683 4325638 ~ 4348853 (+)
LOC122356796 NA coding downstream 411580 4360535 ~ 4362542 (+)
si:ch73-105b23.6 LOC107586506,LOC107727362,LOC107699285,LOC107756817,LOC107678514 coding downstream 415068 4364023 ~ 4373553 (+)
LOC122356983 LOC107727362,LOC107586506,LOC107699285,LOC107678514,LOC107590018,LOC107756817 coding downstream 424259 4373214 ~ 4377830 (+)
G90564 NA non-coding upstream 26043 3852210 ~ 3855543 (+)
G90514 NA non-coding upstream 312094 3569068 ~ 3569492 (+)
G90388 NA non-coding upstream 337934 3502068 ~ 3543652 (+)
G90381 NA non-coding upstream 391795 3469447 ~ 3489791 (+)
G90378 NA non-coding upstream 431101 3450173 ~ 3450485 (+)
G90573 NA non-coding downstream 3645 3952600 ~ 4049612 (+)
G90579 LOC107586473,LOC107758132,LOC107666233 non-coding downstream 43553 3992508 ~ 4013116 (+)
G90646 LOC107707147,LOC108422651 non-coding downstream 108305 4057260 ~ 4062779 (+)
G90650 NA non-coding downstream 156292 4105247 ~ 4105471 (+)
LOC122356176 NA non-coding downstream 188362 4137317 ~ 4142502 (+)
pkdcca pkdcca,LOC107669579,LOC107739483,LOC107718010,LOC107695038,LOC107590011,LOC107586469 other upstream 49036 3809053 ~ 3832550 (+)
prkn park2,LOC107739476,LOC107669573,LOC107696378 other upstream 167823 3620406 ~ 3713763 (+)
G90377 NA other upstream 431569 3449401 ~ 3450017 (+)
G90348 dnph1 other upstream 600589 3277837 ~ 3280997 (+)
G90343 ppp2r5d,LOC107696374,LOC107559765 other upstream 607214 3271325 ~ 3274372 (+)
G90660 epcam,LOC107699293,LOC107727368,LOC107586477,LOC107707148,LOC107678540,LOC107707150,LOC108422531,LOC107723711 other downstream 233544 4182499 ~ 4353931 (+)
si:ch211-250c4.5 LOC107727386,LOC107699305,LOC107586489,LOC107708409,LOC107678597 other downstream 612693 4561648 ~ 4695842 (+)
si:ch73-49p17.1 LOC107678601,LOC107727381,LOC107589548,LOC107708422 other downstream 1043198 4992153 ~ 4997991 (+)
rab11fip5a LOC107733767,LOC107690145,LOC107582533 other downstream 1228763 5177718 ~ 5198404 (+)
ap5s1 ap5s1,LOC107693289,LOC107678575,LOC107718444,LOC107567857,LOC107582535,LOC107733789 other downstream 1312081 5261036 ~ 5271247 (+)

Expression


Co-expression Network