abcb10 (abcb10,LOC107666478,LOC107725469,LOC107601852,LOC107676605,LOC107743532,LOC107552914)


Basic Information

Item Value
gene id abcb10
gene name abcb10,LOC107666478,LOC107725469,LOC107601852,LOC107676605,LOC107743532,LOC107552914
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8892993 ~ 8900282 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254958.1
ACAGGGGGTCACCTTTTTGACCATTATTTATTACACTCCAAACGCCACTTTTCTGTCACTGGAACAGTAATTGAGGTTGCGTTGAGCAAAGCCCGGCAGATGTCGTGTAGCAGGTTTTTGTGACAGGGCGATGCCGGTGAATGCACTGGGCGTGTGTGAAGATAACGCAAACGAGGGCTGGATGTGAAAACTGTCAGGAACAGATAATGCTCAGTAACCGTCGACCCCGGCTTGCAACAAGTCAGTCTTTCTAAAGAGAGTGCCCAGTACCATGAAGTCAAGAGTGTGTCCAGATACTCCGATATTTACAGCACCTGCTTACTCACGGGTCATCTGACTTTATACAGTAAGTTTCGACAGACGATGATTAGATGAGACTCGTGAACTTAGTTTTGGTCGTCTTCTCCAAATACACGAGACAATGTTGCGAATGACAAGATTCACACTAAGGCCACTACAGCAGTGTAACATTACCTGCTGTGGGTCAAATGCATTATATCATGTATCTAATCGGACCTCAAGAACGCCACGGAAAAGGCAGCTGAGCGAGAACGGATCGTTTGAGGTCCGTGTGATGCCTGTCTGTAAGGGAAGGAGCGCGTCCTGGCTCTCTTGTCTCAGACCTGGGGGGCTGTTTCCGCCCGAGAGAGCGTGGGCACGCTGCAGACACTCGGCTGCTCTCTATAGCACATCTACGGACTCCAAACAAACCGAGAAGTCTGTGGTAAGTCAGGAGAGCAAAGTCAAAACCTCAGAAAACTCGCTGCGTGTTCCCTCGGAGGATGTCAAGAAGCTGCTGCAGCTGGCGCATCCTCAGCGGTGGAGGCTGACAGCTGCCGTGGGGTTTTTGGTGATCTCCAGCTCTGTCACCATGTCTGCACCGTTTTTCCTGGGAAAAGTGATCGACACCATCTACACTAGCCCTGCAGAGGACTTCACCTCCTCCCTTACCTCCCTGTGTATCTTGCTAACAGGGGTCTTCCTCTGCGGGGGCGCCGCAAATGCTGCCCGTGTCTACCTCATGCAAATCTCAGGGCAGCAGATTGTTCGGAAGCTGCGGGTGTCCCTTTTCTCCTCGATCCTGAAGCAAGAGGTGGGATTCTTTGATAAGACTCGAACCGGTGAGCTCATTAACCGCCTTTCGGCAGACACGGCCATCGTCGGGCGCTGCCTCACTGACAACCTGTCCGACGGGCTGCGTTCCCTCGCCCAGGCAGGGGCCGGAGTTGGCATGATGttaTATGTGTCACCTAGTCTGGCAGCTTTTGTGCTGATGGTTGTTCCTCCTATTGCCTGCCTGGCTGTAATTTTCGGTCGATTCCTGCGATCCATATCGAGACGCACGCAGGACGCGTTGGCAGAGGCTACACAGTTGGCAGAAGAGAGGATCAGCAACATACGGACAGTCCGGGCTTTTGGAAAAGAGCTGACGGAGGTGCAGAAGTACTCTGAAAAGATTGACTATATTTTTGCACTGGCTAGGAAGGAGGGCGGGCTGTCTGCTGGATTCTATGGAGTGACAGGACTGAGTGGAAATGTCATCATCCTGAGTGTGTTGTATAAGGGAGGTCTGTTGATGGCCAGTGAGGCCATGACTGTTGGGCAGCTTTCCTCTTTCCTAATGTATGCCTTCTGGGTGGGCATCAGTATCGCAGGTTTCAGCTCATTTTACTCCGAGTTAATGAAGGGACTTGGTGCTGGGACTCGTCTATGGGAACTCATGGACAGAAAGCCTGAATTTCCTCTCAATGagGGGCTTGTATTAACACCAGAGCAGTTAAAAGGGGAACTGGAGTTTCGTAATGTGTGTTTTGCTTACCCAACAAGGAAGGATTCCCCCATCTTCCAGGATCTAAGTCTGTCTGTGCCGGCCGGGTCAGTGATGGCAGTGGTGGGATCCAGCGGTTCAGGCAAATCCACTCTCGTGTCACTATTGCTCCGACTCTATGATCCTGATTCAGGTGTGGTCAGTGTGGACGGCCGTGATATACGAGACTTGAATCCTTACTGGTTGAGGAATCACATCGGTACTGTAAGCCAGGAGCCAGTTCTATTCTCCTGCTCTATTGCTGAGAACATTGCTTACGGGGCGGCAGACACAAGTCACGTCACAGTGGAGGACATCTACAGGGCGGCGCAGATCGCCAACGCTCATGACTTCATCCAGGAATTCCCTAAGGGCTATGATACAGTGGTAGGAGAGAAGGGGGTATTGCTGTcagGCGGACAAAAACAAAGAGTCGCCATAGCACGAGCCCTGCTGAAGAATCCAAAGATACTGTTATTGGATGAAGCTACGAGTGCTCTGGATGCAGAGAATGAGTTCCTGGTACAGGAGGCATTAGAGAGGCTAATGGACGGCCGCACTGTGTTGATCATCGCTCACCGTCTCTCCACCATTCAGAGCGCCGATGCCGTGGCTGTGCTGGACCAGCACCGCGTGATGGAGATCGGCAGCCACGCCACACTCCTTGCCAACGACCAGGGGCTTTTCCGCAAGCTGATGGAGAAGCAGGCCTTTCTGCAGGCCGCGCAGAAACACGCTCTCTCCAAATAGAAGTCATTTAAAGACTTCAAAGGGAGCGCACAAATTCAAACATGTTTAAAGGCatttcatatgtttttttattgtgcactCCAATATGACTGAAATGTAGCTATTTATCATAAACTGCCAAGTAACTGGAAACCAGTTGTATACTGATCATTGTTAAGGACAATGGCAAACAGTCACGGCTTACATGCTGCGGACCTGATATAATACTCATACGAGTTGCGGAAAACACtgctttttaaatagttttacgCTTTCATAGCCcaagaaaaacattaatacattacaaaGAAAGCTTTGGAAAAGCTTGAAAGGAATATGAGGGCGATTTGAAATAAGAGACCGAGTTACTTGATGCTACTGCTACCATTACTTGTAATAAATCACGTCACCTTTTATTAAGGAACGGGTGATGATCAGTTTATTGAAGTGTACCTAGGGCCTCAGTCAGGAAACACAAACAGAATGAATTTCTGTGTAAACTGCACATAAAACAGTAAACTGTTGCAATTGATTCACTGGGGATATTTACACAAGAATGATTTATGTAAAACGTAAATTAATTTCATGTACACAAATCCATTCTGCATAGGTTTCATAAAGAAGTACTTCGTGAGGGTGATTACAGACGCAGTCCTTTCTTATCACCTTTGATAATGACACAGATGTCAGTAAATCGTGCCTAGATCATAAACCATAAGCTTTTACTGGGATGTAATCCAACTCTAACCCAGTTACAGTGCCATTGTCAGTAATGAAGATACAATTTTAGAAGGATCACCTGTATGAacaattgtaaaagaaaaaaggatagATATGATCGTCTCAGTTGTATTTGAGAACAGACACTATAACAGagatattttaatgtaactttgaatcaatatatatttatatatacatatgaatcATTTGGATAAGAGGAAATCTATTCAGAACTTTAcaagattttaatatttagtgtgGTAACTTATTAGGTTTCGGGTTTGTGAAATGTATGTGTTCgtctgtttattttctattgttttatctgtactcttaataaattacattgaagCACTGATTGCTTTAAAACGC

Function

symbol description
abcb10 Predicted to enable ATP binding activity and ATPase-coupled transmembrane transporter activity. Acts upstream of or within erythrocyte differentiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human ABCB10 (ATP binding cassette subfamily B member 10).

NR:

description
PREDICTED: ATP-binding cassette sub-family B member 10, mitochondrial-like

GO: NA

KEGG:

id description
K05657 ABCB10; ATP-binding cassette, subfamily B (MDR/TAP), member 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254958.1 True 3631 mRNA 0.47 13 8892993 8900282

Neighbor

gene id symbol gene type direction distance location
pgbd5 pgbd5,LOC107725485,LOC107552948,LOC107743535 coding upstream 85466 8791156 ~ 8807527 (+)
agt agt,LOC107666501,LOC107601848,LOC107725476,LOC107676582,LOC107552950,LOC107743538 coding upstream 110225 8779155 ~ 8782768 (+)
oprm1 oprm1,LOC107676562,LOC107601844,LOC107725432,LOC107743618,LOC107666379,LOC107552929 coding upstream 158035 8721028 ~ 8734958 (+)
il22ra2 LOC107666403,LOC107725447,LOC107601806,LOC107676596,LOC107552930,LOC107743540 coding upstream 245542 8644655 ~ 8647451 (+)
khdrbs2 khdrbs2,LOC107743545,LOC107666564,LOC107676606,LOC108443734 coding upstream 337590 8501459 ~ 8555403 (+)
acta1b act2,actc1a,LOC105907633,LOC107678759,LOC108430668 coding downstream 1268 8901550 ~ 8905011 (+)
ccsapb LOC107725482,LOC107601854,LOC107666447,LOC107676587,LOC107552946,LOC107743530 coding downstream 5604 8905886 ~ 8909793 (+)
pdcd2 pdcd2,LOC107725489,LOC107666434,LOC107601856,LOC107676576,LOC107743527,LOC107552926 coding downstream 40446 8940728 ~ 8942899 (+)
zgc:153169 zgc:153169,LOC107725444,LOC107666437,LOC107601788,LOC107552913 coding downstream 47468 8947750 ~ 8950582 (+)
rab1ab rab1a,LOC107676578,LOC107666439,LOC103035225,LOC107725478,LOC107601860,LOC105005759 coding downstream 50613 8950895 ~ 8956697 (+)
G92048 NA non-coding upstream 101941 8789731 ~ 8791052 (+)
G92047 NA non-coding upstream 103792 8788997 ~ 8789201 (+)
G92046 NA non-coding upstream 105144 8786988 ~ 8787849 (+)
G92045 NA non-coding upstream 106129 8786595 ~ 8786864 (+)
G92042 NA non-coding upstream 109363 8783008 ~ 8783630 (+)
G92087 slc1a4,LOC107725464,LOC107552941 non-coding downstream 29160 8929442 ~ 8965589 (+)
G92108 erlin1,LOC107743516,LOC107725471,LOC107666491,LOC107601865,LOC107676597 non-coding downstream 150085 9050367 ~ 9097905 (+)
G92111 NA non-coding downstream 239935 9140217 ~ 9144511 (+)
G92147 NA non-coding downstream 363782 9264064 ~ 9275699 (+)
G92313 NA non-coding downstream 550164 9450446 ~ 9450689 (+)
sf3b5 sf3b5,LOC107601807 other upstream 152898 8739036 ~ 8740095 (+)
pcnx2 pcnxl2,LOC107725461,LOC107601842,LOC107743596,LOC107666362,LOC107676602,LOC107552953 other upstream 209941 8666267 ~ 8683052 (+)
G91833 slc37a1 other upstream 582169 8306486 ~ 8310824 (+)
zswim8 LOC107666425,LOC107565928,LOC107713895,LOC107743573 other upstream 1006303 7858698 ~ 7886690 (+)
chchd1 LOC107713887,LOC107565922,LOC107743624,LOC107696882,LOC107666381,LOC107555316 other upstream 1054048 7836180 ~ 7838945 (+)
fuom fuom,LOC107676595,LOC107666397,LOC107601808 other downstream 125661 9025943 ~ 9027909 (+)
spef1 zgc:66426,LOC107601866,LOC107725472,LOC107666492,LOC107743614 other downstream 180566 9080848 ~ 9089121 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other downstream 261235 9161517 ~ 9164114 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other downstream 529896 9430178 ~ 9434605 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other downstream 1304831 10205113 ~ 10249725 (+)

Expression


Co-expression Network