LOC122356349 (rmdn2,LOC101884968,LOC107719222,LOC107549137,LOC107665553,LOC107747279,LOC107676373)


Basic Information

Item Value
gene id LOC122356349
gene name rmdn2,LOC101884968,LOC107719222,LOC107549137,LOC107665553,LOC107747279,LOC107676373
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 16335024 ~ 16361805 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254968.1
GAGAAACTCACCAAAGCACTTAGCTCCACAGGAGTGAAGGCCACAGGTTCTGCTCCATTACATTTATGATGGCTCAAGCAGACAGCAGGGCTCTGGCTTTGGGAGTTCTGGCAGGGGCAGCAGGGATCAGTCTGGCGATTGTCTGCTTCCGCAAAATAGGAGCCGGCGGTGGCAGAGTCCTGCACCTGAGCAGCAACGCAGATCACACGGCAGGCAGCCTGGTTTTGCAGACAGGCCAGGCGGAGGTGCTGGATCGGCTGGGAGCTCTGATCCATTGCGTGTCTGAGCTCAAAGAGGAGGTAAAAGCCTTGAAGGATGCCCTTCCGCACCTGCAAGACAATGTAAGAGATCAGCTGAGGGGCCGGAGCGGGGACGACATCGCTGCTCGCCGAGCAAGTCCTCTTCATCGAACTCCCACCAGAAGAAAAAGAGCAGGTGTCTCCGCTAGAAGTGAAGGACACAGCTCAGAAGAGGCAGAGAGTGAAGGAGGGTATATAACAGCTCTGACAGATTCTGAGGAAGATGAAAGTGACGATGACCGAAAGCCACTGCAGGAACCTGTGGATGAGCTCACGGCTCTGCTGCGGAAAGCAGATGGGCTGCACAGCTGTAACGGGGCAGAGAAAGCACAAGGCCTGAATGCTCTGCTGGAGAGGAAAGCAGAGTTTGATCAGAAGTATCAGTACCTTTGGCGGTTGTCCAGAGCCTATGCAGATGCACATGATTTTGCTGCAGACCTTGCAGAGAAGAAGAGCTGTGCTGAGAACGgaaAAAAAGTTGGTGAAGAGGCAATTTCCATCAATCCACAGTGTGCTGAAGGTCATCAGTGGTATGCTATACTCTGTGGGCTCCTGTCAGAATATGAATCTattcagaacaaaataaaaaatggttatCTTTTCAAGGATCATCTGGATAAAGCAATTGAGTTGAAACCTGAAGATCCCCTGTCGTATTATTTGCTGGGCCGCTGGTGCTATGCTGTGTCACAATGCACATGGATAGAGAGGAAAATCGCTGCTACTTTGTTTGGAGAGCCACCCAGTGCCACAGTCCAGGACGCCCTGCAGAACTTTCTCAAGGCAGAAGAGATCAGTCCCAAGTATTCAAAATTCAACTATGTGTTTTTAGCCAAGTGTTACAAAGACTTGGGTCAGAGGAGTCAAGCCCAGCAGATGTGTGACGTTGCCTCTGCAATGAACATTCAGACTAAAGAGGACGAAGAAGCACAGAAGGAACTGGACTCTCTTGTTGCATCACTTTAACAAGTCTCCAGCAAAAGCCCTCTGTCTTTGGTTTCCGTCTCTTTGAACTCGACTGTGACTGGACTGTAGCTGTTTAGCCACAAACCAACATATGAACTACTAATGTGGTCCAGGCCTTGTTATTCATCTATTAAAGGGAAGACCAGCagcaatatttgtttatttttagtttatgcaCAAAATACTGTACTGTAGGACAGtttcttaattcttttttttcctttcaaaacattttagacataATAGTAGCTATACGCAGCATTGAATTAATTGCACTCAGAAATCTACCCGTCCTGGGGTCATCCAAGATGcacatgagtttgtttcttcatttaaaaaccgATTTGGTTGAATGGTGCATTACATCAcatgctcaccaatggatcctctgaagtgaatgggtgccgtcagaatgagagtccaaacagctgatgaaaacatcacaataccGCAAAAGCAAACGGCACTGTTCCAGTCACATTGCCGGTCAAAAGCTGCAAGTTTGAAAGAAACAAACCCATAGTATCACTTTAACATTTTGTCCATCATTCAACCATATGTTTTTTAGAGTGTTGTTTGCTTGAAATctatgcatatttctctcctgattcagatgagattacttttttattagaaaGAGCAATATTACGAATCGAGGACTATTATTTTAGCTataaatgaaagttaaaaagTCTTGAAGAAACCTCTTGATGGATTTGCTGCTTCACGagacgtttttatcagctgtttgaaatggcggtacccattcactgcaatgaatccattggtgagcaatgGATAACCCGAGGATGAGTAATTCTGACTATCAGCTTGAAGGCTGgtgcaattttaattaattctgaCCAATACTGAAACAGATCTGTGTGGTTGGCGTTAAAGGCATGCTAATTagaatttctgtgtttttgttaatccaaaattatgaattattatttcatagACATATCCTACAAAACAGCATGATTATATAGTTCTATTTATGGATATCTAGTTTACCTCATGATAAACGTCCGAAACAAACCTTCGGAAGAACTTCGACACATTTAATGGTTAGTCCTTCCAGAAAAGCTGCTGATAAGAGATTGCTAAATTTTTAATCCATCAAAAATGTTAAACCTTTCACGGCACAATCCTCCCTTTTGAAAGGCAGccttttgcagttttttttattaagaacaCCTGAACAACTCTGTCTGTATTTAATCTTGTTATTCAGATTCTCTCTGTGAAacctgtttttggttttttttttgtaactcaAATGACTTGTATAGATTTTAATCCCTAGACATTATTTTTTTGACCAAAGATGATTTCTAAATCCCAAGAGAAATTATGGGGACCATGTAAGTCTAATGTAATTTTTCCCTCAAATTGTTTTAATACCATTTGTTGGTACCCAGCATTATGAATGTAAGCATTTTTATGTTGAAATGATCTGTATGGTACATTTTAGATTATTGGTGATTTATTATTGAGATGTAATGGTGCATATGAAGATCCTCTTCTCTGCTGCTCACTACAATATACAATAAGGTGAATTCA
>XM_043254969.1
GAATGGTTGCGTTGTCGGGGCGGAACCTTTAGGAGCAAGTACTGGAGCGATACGGACTGTTTAGGTAGACGCACCGCTGCTCTTTTAAGAGTTTGAACAGTTTATGATGGCTCAAGCAGACAGCAGGGCTCTGGCTTTGGGAGTTCTGGCAGGGGCAGCAGGGATCAGTCTGGCGATTGTCTGCTTCCGCAAAATAGGAGCCGGCGGTGGCAGAGTCCTGCACCTGAGCAGCAACGCAGATCACACGGCAGGCAGCCTGGTTTTGCAGACAGGCCAGGCGGAGGTGCTGGATCGGCTGGGAGCTCTGATCCATTGCGTGTCTGAGCTCAAAGAGGAGGTAAAAGCCTTGAAGGATGCCCTTCCGCACCTGCAAGACAATGTAAGAGATCAGCTGAGGGGCCGGAGCGGGGACGACATCGCTGCTCGCCGAGCAAGTCCTCTTCATCGAACTCCCACCAGAAGAAAAAGAGCAGGTGTCTCCGCTAGAAGTGAAGGACACAGCTCAGAAGAGGCAGAGAGTGAAGGAGGGTATATAACAGCTCTGACAGATTCTGAGGAAGATGAAAGTGACGATGACCGAAAGCCACTGCAGGAACCTGTGGATGAGCTCACGGCTCTGCTGCGGAAAGCAGATGGGCTGCACAGCTGTAACGGGGCAGAGAAAGCACAAGGCCTGAATGCTCTGCTGGAGAGGAAAGCAGAGTTTGATCAGAAGTATCAGTACCTTTGGCGGTTGTCCAGAGCCTATGCAGATGCACATGATTTTGCTGCAGACCTTGCAGAGAAGAAGAGCTGTGCTGAGAACGgaaAAAAAGTTGGTGAAGAGGCAATTTCCATCAATCCACAGTGTGCTGAAGGTCATCAGTGGTATGCTATACTCTGTGGGCTCCTGTCAGAATATGAATCTattcagaacaaaataaaaaatggttatCTTTTCAAGGATCATCTGGATAAAGCAATTGAGTTGAAACCTGAAGATCCCCTGTCGTATTATTTGCTGGGCCGCTGGTGCTATGCTGTGTCACAATGCACATGGATAGAGAGGAAAATCGCTGCTACTTTGTTTGGAGAGCCACCCAGTGCCACAGTCCAGGACGCCCTGCAGAACTTTCTCAAGGCAGAAGAGATCAGTCCCAAGTATTCAAAATTCAACTATGTGTTTTTAGCCAAGTGTTACAAAGACTTGGGTCAGAGGAGTCAAGCCCAGCAGATGTGTGACGTTGCCTCTGCAATGAACATTCAGACTAAAGAGGACGAAGAAGCACAGAAGGAACTGGACTCTCTTGTTGCATCACTTTAACAAGTCTCCAGCAAAAGCCCTCTGTCTTTGGTTTCCGTCTCTTTGAACTCGACTGTGACTGGACTGTAGCTGTTTAGCCACAAACCAACATATGAACTACTAATGTGGTCCAGGCCTTGTTATTCATCTATTAAAGGGAAGACCAGCagcaatatttgtttatttttagtttatgcaCAAAATACTGTACTGTAGGACAGtttcttaattcttttttttcctttcaaaacattttagacataATAGTAGCTATACGCAGCATTGAATTAATTGCACTCAGAAATCTACCCGTCCTGGGGTCATCCAAGATGcacatgagtttgtttcttcatttaaaaaccgATTTGGTTGAATGGTGCATTACATCAcatgctcaccaatggatcctctgaagtgaatgggtgccgtcagaatgagagtccaaacagctgatgaaaacatcacaataccGCAAAAGCAAACGGCACTGTTCCAGTCACATTGCCGGTCAAAAGCTGCAAGTTTGAAAGAAACAAACCCATAGTATCACTTTAACATTTTGTCCATCATTCAACCATATGTTTTTTAGAGTGTTGTTTGCTTGAAATctatgcatatttctctcctgattcagatgagattacttttttattagaaaGAGCAATATTACGAATCGAGGACTATTATTTTAGCTataaatgaaagttaaaaagTCTTGAAGAAACCTCTTGATGGATTTGCTGCTTCACGagacgtttttatcagctgtttgaaatggcggtacccattcactgcaatgaatccattggtgagcaatgGATAACCCGAGGATGAGTAATTCTGACTATCAGCTTGAAGGCTGgtgcaattttaattaattctgaCCAATACTGAAACAGATCTGTGTGGTTGGCGTTAAAGGCATGCTAATTagaatttctgtgtttttgttaatccaaaattatgaattattatttcatagACATATCCTACAAAACAGCATGATTATATAGTTCTATTTATGGATATCTAGTTTACCTCATGATAAACGTCCGAAACAAACCTTCGGAAGAACTTCGACACATTTAATGGTTAGTCCTTCCAGAAAAGCTGCTGATAAGAGATTGCTAAATTTTTAATCCATCAAAAATGTTAAACCTTTCACGGCACAATCCTCCCTTTTGAAAGGCAGccttttgcagttttttttattaagaacaCCTGAACAACTCTGTCTGTATTTAATCTTGTTATTCAGATTCTCTCTGTGAAacctgtttttggttttttttttgtaactcaAATGACTTGTATAGATTTTAATCCCTAGACATTATTTTTTTGACCAAAGATGATTTCTAAATCCCAAGAGAAATTATGGGGACCATGTAAGTCTAATGTAATTTTTCCCTCAAATTGTTTTAATACCATTTGTTGGTACCCAGCATTATGAATGTAAGCATTTTTATGTTGAAATGATCTGTATGGTACATTTTAGATTATTGGTGATTTATTATTGAGATGTAATGGTGCATATGAAGATCCTCTTCTCTGCTGCTCACTACAATATACAATAAGGTGAATTCA

Function

symbol description
rmdn2 Enables microtubule binding activity. Located in Golgi apparatus; cytosol; and spindle.

NR:

description
regulator of microtubule dynamics protein 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254968.1 False 2831 mRNA 0.42 11 16335024 16361805
XM_043254969.1 True 2869 mRNA 0.42 11 16335024 16361056

Neighbor

gene id symbol gene type direction distance location
LOC122356736 nanp,LOC107586073,LOC107736515,LOC107665564,LOC107549144,LOC107676393,LOC107719206 coding downstream 30696 16302209 ~ 16304328 (-)
ipmka LOC107747295,LOC107665575,LOC107719230,LOC107586076,LOC107549139 coding downstream 45307 16279665 ~ 16289717 (-)
morn4 morn4,LOC107719210,LOC107702749,LOC107747296 coding downstream 441347 15889973 ~ 15893677 (-)
st3gal7 st3gal7,LOC107665608,LOC107601047,LOC107747259 coding downstream 458187 15872075 ~ 15876837 (-)
nkx3.3 nkx3.3,LOC107747300,LOC107665572,LOC107586090,LOC107579953 coding downstream 586564 15743917 ~ 15748460 (-)
LOC122356747 kmo,LOC107665616,LOC107549141,LOC101885014,LOC106576798 coding upstream 70890 16432695 ~ 16445739 (-)
trnah-gug_23 NA coding upstream 85886 16447691 ~ 16447762 (-)
march5 march5,LOC107719203,LOC107549154,LOC107747250,LOC107665589 coding upstream 108130 16469935 ~ 16487675 (-)
btaf1 btaf1,LOC107679172,LOC107676378,LOC107747276,LOC106604898 coding upstream 157731 16519536 ~ 16538481 (-)
LOC122356270 LOC107549152,LOC107747275 coding upstream 181276 16543081 ~ 16546492 (-)
G94298 LOC107549156,LOC107665613,LOC107747251,LOC107676394,LOC107719205 non-coding downstream 2677 16330142 ~ 16332347 (-)
G94247 NA non-coding downstream 367681 15967014 ~ 15967343 (-)
G94232 NA non-coding downstream 427533 15907270 ~ 15907491 (-)
G94200 NA non-coding downstream 571279 15763424 ~ 15763745 (-)
G94199 NA non-coding downstream 572181 15762551 ~ 15762843 (-)
G94308 NA non-coding upstream 14768 16376573 ~ 16376923 (-)
G94411 opn3,LOC107549142,LOC107665579,LOC107747290,LOC107719228,LOC107586115 non-coding upstream 60861 16422666 ~ 16423793 (-)
G94414 opn3,LOC107665579,LOC107549142,LOC107747290,LOC107719228 non-coding upstream 68036 16429841 ~ 16430293 (-)
G94416 opn3,LOC107665579,LOC107747290,LOC107549142,LOC107549136,LOC107586115 non-coding upstream 68869 16430674 ~ 16432430 (-)
G94425 NA non-coding upstream 154052 16515857 ~ 16518826 (-)
cisd1 cisd1,LOC107549159,LOC107747252,LOC107665600,LOC105902329,LOC108443718 other downstream 42645 16290154 ~ 16292379 (-)
pcdh15a pcdh15a,LOC108443650,LOC107586072 other downstream 165820 16009687 ~ 16169204 (-)
G94216 NA other downstream 449802 15877527 ~ 15885222 (-)
LOC122356531 cnnm1,LOC107702746,LOC107719212,LOC107747260,LOC107601048,LOC107665556 other downstream 541484 15774777 ~ 15793540 (-)
nkx2.3 nkx2.3,LOC107747299,LOC107665571,LOC107702735,LOC107601037,LOC107586108,LOC107719236 other downstream 579896 15752636 ~ 15755128 (-)
G94412 opn3,LOC107549142,LOC107665579,LOC107586115,LOC107747290,LOC107719228,LOC107676370 other upstream 63892 16425697 ~ 16426535 (-)
LOC122356193 slc35f4,slc35f3,LOC107664436,LOC107586844,LOC107559881,LOC107668528,LOC107747268,LOC107665565,LOC107664233,LOC107736862 other upstream 1012945 17374750 ~ 17387006 (-)
LOC122356088 ate1,LOC107679187,LOC107655512 other upstream 2183766 18545571 ~ 18672893 (-)
LOC122357020 LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639 other upstream 2595898 18957703 ~ 18975524 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other upstream 2924225 19286030 ~ 19362041 (-)

Expression


Co-expression Network