btbd3b (btbd3b,LOC107654989,LOC107705408,LOC107585513,LOC107739865,LOC107679136,LOC107600567)


Basic Information

Item Value
gene id btbd3b
gene name btbd3b,LOC107654989,LOC107705408,LOC107585513,LOC107739865,LOC107679136,LOC107600567
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 13275699 ~ 13284622 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255061.1
TCCATTCAGCCCCCACAGTCAGCAAAACACACGTCAGAGCGCAGGTCCACAGCAAACGAATCCTGCAGagctctgtgtatgtgtgttgatgtgtgtgtatgtcaggAGTGtcaggaggagagagagagacacacacacagcgtggACTAGCTGCTTCTGAACCACTGCAGGAGCATTAAATCTGGGACTGTCACAGATactgaaggagagagagaagacattCAAAGAGGGACGTTTATCTCGCAGCACAGTTATGGAGACTCATCTCTGCTGTCCAGCAGCGGATCAAACTAGAAGCAAAGGACAGAAAAGTCAGCCGCCGTATTGACTTTAATCTTCTGGTGGAAGAAGGAGATTTTATTCTCAGACAGTTTGCTCTCAGAAGGTGAACACACTCATGGTGGATGCCAAGGGAAGGAACATGAAATGTCTGACGTTCTTGTTGATGCTTCCAGAATCAGTTAAGAGCAAGTCCAGTAAAGGCTCCAAAAAGGGGAGTCCCAGCAGCTCGTCCAAGCTGCCCCCAGTGTGTTATGAGATCATCACCTTGAAaaccaagaagaagaagaagatggcAGCGGAGATCTTTCCCACTAAGAAGCCGGTATCGGCCACCACCGTACAGCAGTACCAGCAGCAGAActtgaacaacaacaacaccatCCAATGTTGCAACTGGCAGGGTCTTTACTCCACGATCCGGGAGAGAAATGCTGTGATGTTCAATAATGAACTGATGGCTGATGTTCACTTTGTTGTTGGTCAGTCCGGAGGAACTCAGAGGCTTCCGGGACACAAGTATGTCCTTGCTGTGGGAAGCTCGGTTTTCCATGCCATGTTTTATGGAGAGTTGGCAGAAGACAAAGAGGAGATCCGTATCCCTGATGTAGAACCTCCAGCCTTTCTGGCTATGCTGAAgtACATTTACTGTGATGAAATTGACTTGAGTGCTGACACCGTACTGGCAACATTATACGCAGCCAAAAAGTACATAGTCCCGCACCTGGCTCGGGCTTGTGTCAACTTCTTGGAAACAAGTTTGAGCGCAAAGAATGCGTGTATTCTTCTATCTCAAAGCTGTCTGTTTGAAGAGCCAGACCTAACGCAACGCTGCTGGGAAGTCATTGACGCTCAAGCTGAGTTGGCACTTAAATCCGAGGGCTTTTGTGACATTGACGCTCAGACCTTGGAGAGCATTCTCAGACGGGAGACTTTGAACGCTAAGGAGATTGTAGTGTTCGAGGCAGCGCTAAGCTGGGCAGAGGCTGAATGTCAGCGAAGGGAGATGAACACAAGTATTGACAACAAACGCAAGGTATTGGGCCAAGCCGTCTACCTGATCCGTATACCGACCATGGGTCTTGATGATTTTGCAAACGGTGCTGCGCAATCAGGAGTGTTAACTCTAAACGAGACCAATGACATTTTCCTGTGGTACACAGCGGCTAAGAAACCTGAGCTGCAGTTTGCCTGCCAACCTCGTAAGGGATTGACGCCACAGAAGTGCCATCGCTTCCAGTCATGCGCCTACCGCAGCAACCAATGGCGTTATCGTGGACGCTGTGACAGCATTCAGTTTGCTGTAGATAAACGAGTGTTTATCGCGGGTTTCGGGCTCTATGGTTCAAGCTGTGGATCTGCCGAGTATACGGCCAAGATCGAGCTCAAACGGCAAGGAGTCGTTCTGGGAACCAATCTTAGCAAGTACTTTTCTGATGGATCCAGCAACACCTTCCCAGTTTGGTTTGAGTATCCGGTTCAGATCGAGCCTGACACTTTCTATACGGCAAGTGTGGTTCTGGATGGAAATGAATTGAGTTATTTCGGACAAGAGGGTATGACGGAAGTCCAGTGTGGGAAGGTGACCTTTCAGTTTCAGTGCTCTTCAGACAGTACCAACGGCACAGGAGTACAAGGAGGCCAAATTCCCGAGCTCATTTTCTATGCCTAAGTTTCTCTtgggaaaacaaaaaactgtcCTCCTTGCCAGTGTGAAATAGCTTTACATTACAgacaatatatgtttttgtattacatGGCGGAATTCAACTTCTCCAATGCTGCCAGAGACAAACCGAGACATAACAGGCATTACAAGGGCCTTGTTTTGAGCTCTTAGTAGTTTTTCGGCGGCTGTCAAAGCGTGAACAGTTACACTGTATTTCCTCCTTGTCTTaaaagtgaattaaatattttactttgtgCTCTGCATAAAGCTGCACCTGTTTACAAAAGGAAATCTCATTTCAGTGGGATGTAAGTTGTTGTATATGCTCCTAGTTGGGTGCCACAGCCTggtttttgttgctttttatcTTAATTGATTTGAAagacttttgattaatttaattttgagaagggacattgtgcattgtacagtatatatttaaatgtgtgaactaaattataaatatatacataattatataaatattatcacTCCATGGCTATATTTACTGTTTACAATGACTATATGCCATGTTAGTGAACGCTTGCACATGTATATTGTAGCAATAGTcaacaaaatatacaaactcATGATAACAGACTAACTTCAGTATTTCTTCACTTCACGATTCAAGGCAATCAAGATACCTAACACCAAAGTTACTGTCATCATAACTAATTCTTttgattaaatgtcattttcaagcACAGATTATCTTAGACACATATTGTTTAGAATAACCATTTAGATTTAGAAACATCCTTTCTTTGTATCAGCCATAATGACAGGTATAAACTATATGTTTTTAGCATAAACATATGTAGAGtttgcactaaaataaacactttccaTTCAGAGTCTTCGACCCTACGGTAACATTAGTCAAGAGACAGGagtcatatttaatgtttcgtaaatgaaaacaatgctgTGAGGGACAAATGTATGGGCTACTCTGGTATgggttatatttaaataattatacatgaCACAGCTGTACATCAATCCTtaactgttttcattttcaggagATTAATATGACCTGACTGAGGTCAGTGGATTCCAATGTACAGTGCTTCATGTTGTATTATATTCAGCAAAATGAACattctaaatatttcttattaaataaaatgtcttctgtgaaacatgaCTTAACAGTTCACCACGAACCAATATGTTTTAAGTCTCTTTTCATGCAAGTTAAATAAAGTGCACTAAGAAACTAACTGAACTACCGCTAAAAGCTGAAATAACAGGTTACATAATCACACACAAAACTATCACACAATGTAACGTTTTGGGATATTGTGTCATCATTTCCACCTCTATAAGTGTTGTGTTCATGCCTAATTAGCAGCATAATTAGCTGTCACCCAACAAACCCGTCTTCACGCTACTAAATGGGATGTTGTCAACTAACATTTTATCACGTATTTGTAAAGACAAGATAGTTCAAGCATTTTATTTGGATTGCATTGGGCTGTAATTACCAGAATTGTTGTTTTTCCCCTCTTATTTTCATTAATGTGTCAAAAGCAGCAAGGAAGCAGAATGCTAATTCTATTCCCTGCTGAACTTTAAGTGACAGACATAATAGCGATGAgcagaaaacaaataattgctCTTTTAACTGATCAAGGAATGACCAGTCGCATTTACCTGACACAATCtaatattacagctttcttttttttcccccttccaTTTTTACATAGTGAGCATGACAGGTCTGTGAATTTGGTCTGTGGTATTTGGTCTGTGAATCAGCACTGTACTCAAATCAAAACAGTAGGGTTATACAGATCACCAACAAGGTGCACTTTAAGATGTGCTTGAGCAGCAATTTTATTCCATTCAAATCAactaaaatgtgttcttttatGGAGTTTTGTGTGTTGCGATTTTGTTAATGTCTATTTTCATCACATGAGCTACTTTAATCTTTGTGCACTACTTAGAAGAGGTCATTGATGGAGCTTGCTGTGTGTTTATGATGAACACTTCTGTGAATGTGTATAAagcatatgtttgtgtgttacaGTACAGAAAGACTTATGAATGTGTATGATAGTTGAACATGCAAATAAACTGAACAAGCAGTTCTATTATGACATTAA
>XM_043255062.1
TCCATTCAGCCCCCACAGTCAGCAAAACACACGTCAGAGCGCAGGTCCACAGCAAACGAATCCTGCAGagctctgtgtatgtgtgttgatgtgtgtgtatgtcaggAGTGtcaggaggagagagagagacacacacacagcgtggACTAGCTGCTTCTGAACCACTGCAGGAGCATTAAATCTGGGACTGTCACAGATactgaaggagagagagaagacattCAAAGAGGGACGTTTATCTCGCAGCACAGTTATGGAGACTCATCTCTGCTGTCCAGCAGCGGATCAAACTAGAAGCAAAGGACAGAAAAGTCAGCCGCCGTATTGACTTTAATCTTCTGGTGGAAGAAGGAGATTTTATTCTCAGACAGTTTGCTCTCAGAAGAATCAGTTAAGAGCAAGTCCAGTAAAGGCTCCAAAAAGGGGAGTCCCAGCAGCTCGTCCAAGCTGCCCCCAGTGTGTTATGAGATCATCACCTTGAAaaccaagaagaagaagaagatggcAGCGGAGATCTTTCCCACTAAGAAGCCGGTATCGGCCACCACCGTACAGCAGTACCAGCAGCAGAActtgaacaacaacaacaccatCCAATGTTGCAACTGGCAGGGTCTTTACTCCACGATCCGGGAGAGAAATGCTGTGATGTTCAATAATGAACTGATGGCTGATGTTCACTTTGTTGTTGGTCAGTCCGGAGGAACTCAGAGGCTTCCGGGACACAAGTATGTCCTTGCTGTGGGAAGCTCGGTTTTCCATGCCATGTTTTATGGAGAGTTGGCAGAAGACAAAGAGGAGATCCGTATCCCTGATGTAGAACCTCCAGCCTTTCTGGCTATGCTGAAgtACATTTACTGTGATGAAATTGACTTGAGTGCTGACACCGTACTGGCAACATTATACGCAGCCAAAAAGTACATAGTCCCGCACCTGGCTCGGGCTTGTGTCAACTTCTTGGAAACAAGTTTGAGCGCAAAGAATGCGTGTATTCTTCTATCTCAAAGCTGTCTGTTTGAAGAGCCAGACCTAACGCAACGCTGCTGGGAAGTCATTGACGCTCAAGCTGAGTTGGCACTTAAATCCGAGGGCTTTTGTGACATTGACGCTCAGACCTTGGAGAGCATTCTCAGACGGGAGACTTTGAACGCTAAGGAGATTGTAGTGTTCGAGGCAGCGCTAAGCTGGGCAGAGGCTGAATGTCAGCGAAGGGAGATGAACACAAGTATTGACAACAAACGCAAGGTATTGGGCCAAGCCGTCTACCTGATCCGTATACCGACCATGGGTCTTGATGATTTTGCAAACGGTGCTGCGCAATCAGGAGTGTTAACTCTAAACGAGACCAATGACATTTTCCTGTGGTACACAGCGGCTAAGAAACCTGAGCTGCAGTTTGCCTGCCAACCTCGTAAGGGATTGACGCCACAGAAGTGCCATCGCTTCCAGTCATGCGCCTACCGCAGCAACCAATGGCGTTATCGTGGACGCTGTGACAGCATTCAGTTTGCTGTAGATAAACGAGTGTTTATCGCGGGTTTCGGGCTCTATGGTTCAAGCTGTGGATCTGCCGAGTATACGGCCAAGATCGAGCTCAAACGGCAAGGAGTCGTTCTGGGAACCAATCTTAGCAAGTACTTTTCTGATGGATCCAGCAACACCTTCCCAGTTTGGTTTGAGTATCCGGTTCAGATCGAGCCTGACACTTTCTATACGGCAAGTGTGGTTCTGGATGGAAATGAATTGAGTTATTTCGGACAAGAGGGTATGACGGAAGTCCAGTGTGGGAAGGTGACCTTTCAGTTTCAGTGCTCTTCAGACAGTACCAACGGCACAGGAGTACAAGGAGGCCAAATTCCCGAGCTCATTTTCTATGCCTAAGTTTCTCTtgggaaaacaaaaaactgtcCTCCTTGCCAGTGTGAAATAGCTTTACATTACAgacaatatatgtttttgtattacatGGCGGAATTCAACTTCTCCAATGCTGCCAGAGACAAACCGAGACATAACAGGCATTACAAGGGCCTTGTTTTGAGCTCTTAGTAGTTTTTCGGCGGCTGTCAAAGCGTGAACAGTTACACTGTATTTCCTCCTTGTCTTaaaagtgaattaaatattttactttgtgCTCTGCATAAAGCTGCACCTGTTTACAAAAGGAAATCTCATTTCAGTGGGATGTAAGTTGTTGTATATGCTCCTAGTTGGGTGCCACAGCCTggtttttgttgctttttatcTTAATTGATTTGAAagacttttgattaatttaattttgagaagggacattgtgcattgtacagtatatatttaaatgtgtgaactaaattataaatatatacataattatataaatattatcacTCCATGGCTATATTTACTGTTTACAATGACTATATGCCATGTTAGTGAACGCTTGCACATGTATATTGTAGCAATAGTcaacaaaatatacaaactcATGATAACAGACTAACTTCAGTATTTCTTCACTTCACGATTCAAGGCAATCAAGATACCTAACACCAAAGTTACTGTCATCATAACTAATTCTTttgattaaatgtcattttcaagcACAGATTATCTTAGACACATATTGTTTAGAATAACCATTTAGATTTAGAAACATCCTTTCTTTGTATCAGCCATAATGACAGGTATAAACTATATGTTTTTAGCATAAACATATGTAGAGtttgcactaaaataaacactttccaTTCAGAGTCTTCGACCCTACGGTAACATTAGTCAAGAGACAGGagtcatatttaatgtttcgtaaatgaaaacaatgctgTGAGGGACAAATGTATGGGCTACTCTGGTATgggttatatttaaataattatacatgaCACAGCTGTACATCAATCCTtaactgttttcattttcaggagATTAATATGACCTGACTGAGGTCAGTGGATTCCAATGTACAGTGCTTCATGTTGTATTATATTCAGCAAAATGAACattctaaatatttcttattaaataaaatgtcttctgtgaaacatgaCTTAACAGTTCACCACGAACCAATATGTTTTAAGTCTCTTTTCATGCAAGTTAAATAAAGTGCACTAAGAAACTAACTGAACTACCGCTAAAAGCTGAAATAACAGGTTACATAATCACACACAAAACTATCACACAATGTAACGTTTTGGGATATTGTGTCATCATTTCCACCTCTATAAGTGTTGTGTTCATGCCTAATTAGCAGCATAATTAGCTGTCACCCAACAAACCCGTCTTCACGCTACTAAATGGGATGTTGTCAACTAACATTTTATCACGTATTTGTAAAGACAAGATAGTTCAAGCATTTTATTTGGATTGCATTGGGCTGTAATTACCAGAATTGTTGTTTTTCCCCTCTTATTTTCATTAATGTGTCAAAAGCAGCAAGGAAGCAGAATGCTAATTCTATTCCCTGCTGAACTTTAAGTGACAGACATAATAGCGATGAgcagaaaacaaataattgctCTTTTAACTGATCAAGGAATGACCAGTCGCATTTACCTGACACAATCtaatattacagctttcttttttttcccccttccaTTTTTACATAGTGAGCATGACAGGTCTGTGAATTTGGTCTGTGGTATTTGGTCTGTGAATCAGCACTGTACTCAAATCAAAACAGTAGGGTTATACAGATCACCAACAAGGTGCACTTTAAGATGTGCTTGAGCAGCAATTTTATTCCATTCAAATCAactaaaatgtgttcttttatGGAGTTTTGTGTGTTGCGATTTTGTTAATGTCTATTTTCATCACATGAGCTACTTTAATCTTTGTGCACTACTTAGAAGAGGTCATTGATGGAGCTTGCTGTGTGTTTATGATGAACACTTCTGTGAATGTGTATAAagcatatgtttgtgtgttacaGTACAGAAAGACTTATGAATGTGTATGATAGTTGAACATGCAAATAAACTGAACAAGCAGTTCTATTATGACATTAA

Function

symbol description
btbd3b Predicted to be involved in dendrite morphogenesis. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to human BTBD3 (BTB domain containing 3).

NR:

description
BTB/POZ domain-containing protein 3-like

GO: NA

KEGG:

id description
K10478 BTBD3_6; BTB/POZ domain-containing protein 3/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255061.1 True 4068 mRNA 0.41 5 13275699 13284622
XM_043255062.1 False 3998 mRNA 0.41 5 13275699 13284622

Neighbor

gene id symbol gene type direction distance location
sptlc3 sptlc3,LOC107654988,LOC107600566,LOC107662809,LOC107739864,LOC107705357 coding downstream 71467 13181337 ~ 13204232 (-)
ism1 ism1,LOC107654990,LOC107739863,LOC107705406,LOC107662810 coding downstream 96246 13166439 ~ 13179453 (-)
kif16bb kif16bb,LOC107654912,LOC107600573 coding downstream 145987 13097691 ~ 13129712 (-)
flrt3 flrt3,LOC107705403,LOC107654987,LOC107600562,LOC107585510,LOC107724457,LOC107662813 coding downstream 573541 12691394 ~ 12702158 (-)
LOC122356399 LOC107675571,LOC107654995,LOC107585506,LOC107724409,LOC107600571 coding downstream 663017 12610172 ~ 12612682 (-)
LOC122356824 LOC107705409,LOC107600568,LOC107654911,LOC107683712 coding upstream 105950 13390572 ~ 13405543 (-)
memo1 memo1,LOC107654980,LOC107705412 coding upstream 286168 13570790 ~ 13580096 (-)
erlec1 erlec1,LOC107654972,LOC107679899 coding upstream 394665 13679287 ~ 13684104 (-)
LOC122356826 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 coding upstream 443120 13727742 ~ 13735822 (-)
LOC122356402 mycla,LOC107680680,LOC107739875,LOC107553198,LOC107576479,LOC107654967 coding upstream 455027 13739649 ~ 13743024 (-)
LOC122356420 NA non-coding downstream 2558 13271278 ~ 13273141 (-)
LOC122356418 NA non-coding downstream 51163 13208410 ~ 13224536 (-)
G93472 NA non-coding downstream 112972 13162489 ~ 13162727 (-)
G93471 NA non-coding downstream 113329 13162145 ~ 13162370 (-)
G93470 NA non-coding downstream 117262 13156930 ~ 13158437 (-)
G93513 NA non-coding upstream 62779 13347401 ~ 13347885 (-)
G93562 NA non-coding upstream 294905 13579527 ~ 13675111 (-)
LOC122356419 NA non-coding upstream 338144 13622766 ~ 13650733 (-)
G93583 NA non-coding upstream 369757 13654379 ~ 13655349 (-)
G93588 LOC107654976,LOC107553194,LOC107602941 non-coding upstream 377128 13661750 ~ 13663911 (-)
LOC122356414 NA other downstream 678397 12557077 ~ 12597302 (-)
tmem234 tmem234,LOC107675523,LOC107576456 other downstream 844921 12429197 ~ 12430778 (-)
vti1b vti1b,LOC107655020,LOC107705385,LOC107724223,LOC107675543 other downstream 982105 12278454 ~ 12293594 (-)
utp25 diexf,LOC107668835,LOC107707040,LOC107675582,LOC107757128 other downstream 1476667 11771428 ~ 11799032 (-)
six1a six1a,six1,LOC107588725,LOC107675533,LOC107708210,LOC107668775,LOC108434988 other downstream 1627664 11643930 ~ 11648035 (-)
LOC122356823 LOC107654911,LOC107705409,LOC107600568,LOC107683712 other upstream 25330 13309952 ~ 13325051 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other upstream 235791 13520413 ~ 13558834 (-)
srd5a2b srd5a2b,LOC107739895,LOC107654923,LOC107683892,LOC107705374,LOC107602938 other upstream 279800 13564422 ~ 13568025 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other upstream 408404 13693026 ~ 13718314 (-)
LOC122356386 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 other upstream 613636 13898258 ~ 13904702 (-)

Expression


Co-expression Network