erlec1 (erlec1,LOC107654972,LOC107679899)


Basic Information

Item Value
gene id erlec1
gene name erlec1,LOC107654972,LOC107679899
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 13679287 ~ 13684104 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255063.1
TTCCTGTTTTAACTCTAGTCAAACTATCAGCAGTTAGTTGGCTATTAGACCTCACGGAATACCTGTAGTGACCGTGTTTCTCACCCTTCTTCTCCAGCTCTTTCTCTCTAATGTCCCGATAGCGCTTTTGGAGGCTCATCAGGGGCGATGCGGGTGTTTTGGCGTTGGTTTTTGTTGCTGATTTTGGTCGGAGTGTCTGCAAATCGTGCAGGATCTCCTGTGTTTACAGATGAAATCCCCTTCAAAATCAAATGGCCCGGGGCAGACTTCACCCTGTCAACGTCAGGAGGCCTGTACAAAGAAGATGACTATGTTATCATGACAactacagaaaaagaaaagtacaaATGTTTATTGCCGTCTTTGTCTGGCAACCAGGAGGATGATGTGAAGGAGTATGATGGGCCGAGTCCAGCTGTGCTGCTGGAGCCGTTGTTCAAACAGAGCAGCTGCTCCTACAGAATCGAATCATACTGGACATATGAAGTGTGCCACGGGAAGCATGTACGGCAGTACCATGAGGACAAAGAGACGGGGCAGAAGATCAACATTCAGGAATACTTTCTGGGTACcatgaaaaaagagagtgcagAATCAGAAACGGAAAAATCCAGTGACTCTGAATCAGAAAGATCAAACGTCAACACACAGGTGCCAACTAAGAATATAGAGGGTCAGCTGACACCATACTATCCCGTAGAAATGGCACATGGGACTGAATGCTCTCTGAGACAGAATGAACCTCGCTCTACCACGGTGCTGTACGTCTGCCACCCAGAGGCAAAACATGAGATCCTCACGATCGCTGAGGTCATCACCTGTCAGTATGAAGTAGTGGTGCTCACACCCCTCATCTGTCCTCACCCGAAATACAGGTTCAAGTCGTCCCCAGTGAATGACATCTTTTGCCAGGCTCTGGGTGGCTCCCCTCTTAGACCTCAGAGTCTGTCCCAGCTGGATCGTGAGCAGGAAGAGCTGCTCAAACCACCGTTCAGCTCAAGCACCGAAAGAGATCAGAGAGGATCCAGGGAGGATTCATCTCCAGTGAAAGAAGAGGCGTATACTTCTACCCATAAGCCCCTGACAGTGGGTGGGCAAGCCCAGGTCACAGTTGGCACTACCCACATCTCTCGTTTGACTGATGAGCAGCTGATCAAGGAGTTTCTGAGTGGCTCATACTGTCTGCATGGGGGTGTTGGATGGTGGAAGTATGAATTCTGTTATGGAAAGCATGTCCATCAGTATCATGAGGATAAAGAACAAGGAAAGAACATTGTAGTGGTGGGCAGCTGGAACACTGAGGATCATTTTAACTGGGCCAAGAAAAACGTGGCTCGATCTTATCATTTGAAAGATGATGGAGTACAGAAAGTCAAGGTCGTATCACACTTCTATGGCCGTGGAGATGTTTGTGACCTAACAGGGAAACCGAGACAAGTTATAGTCAAGCTCAAGTGTAAGGAGTCAGAGTCTCCTCATGCTGTTACAGTTTACATGCTGGAACCTCAGACCTGTCAATATATTCTCGGGGTTGAGTCACCCGTAATATGCAAGATCTTGGACACTGCAGATGAAAATGGACTTCTTTCAATTCCTAGCTAGCCTATATGGAGGAGATGGTTAGTTTGGAGAATGAACAATATTGAGGCAGTATGATGCTCAGAGGGTGAGATAAAAGTCTAGTACTTCCATAGATTCATGGTGATAACATGGACTTGCCGAATCTCAGACCTCCACCCTTTGAGAAAGTCCCTCAGTGACTGCACTTTCTGTTGTTTGAAGACTAAACAAGgagatctgaagaaccttttacaCCTGCAGATGCAGCTAGGACTGAATTctcaatgttttatttgcaaatctCAAACGtgttaaagaatattttttttcagcttttttcatGCTTTGGCACAGTTGGTCGGCTGTGGGAAAGTCACTTTAAAAGTctaatcaaatgattaatttattaatcaattgATTGTACAAGTTGgtcaactgttttaaatgtacattatttatttgatcagagtTCTGGTAGTTCAGTGCTTGCCATTATCACTGTGCAGATGGAGATGgttattacatgtttttaaaagtgatttaagTAAGTAATTTTGCAATGCAAAGTGCAAGGGAAAATACACTGTCTTGTACACAAAGGAAAGTGAATGTAagtaaacgtttttttaaatcatgagtCATTGATTTGTTTACAATTTGTGATTACCTTCACTTAAATGTAACCACTTCCACTATTGTACAATAAAGTGTTTGGTGAAGGGCTCCTCTTAACTCAAGAACAAATTTATCAagactattttatttcattgcattgCCTGCAATGCTGGTTGTTGCTCAGTCTGTACATGTTCAGTTGAATAAAGTATGAATTTCAAGTC
>XM_043255064.1
TTGATAGCTGGCAGTCACTGACACCGGCTCGTGCGCCTCACGCGCTATTGGCTGAAGAGAATTTCCGTCTGATGCCGGAAATGGACGTGGCAAGATGACAAAGTCCTGCTCTTTCTCTCTAATGTCCCGATAGCGCTTTTGGAGGCTCATCAGGGGCGATGCGGGTGTTTTGGCGTTGGTTTTTGTTGCTGATTTTGGTCGGAGTGTCTGCAAATCGTGCAGGATCTCCTGTGTTTACAGATGAAATCCCCTTCAAAATCAAATGGCCCGGGGCAGACTTCACCCTGTCAACGTCAGGAGGCCTGTACAAAGAAGATGACTATGTTATCATGACAactacagaaaaagaaaagtacaaATGTTTATTGCCGTCTTTGTCTGGCAACCAGGAGGATGATGTGAAGGAGTATGATGGGCCGAGTCCAGCTGTGCTGCTGGAGCCGTTGTTCAAACAGAGCAGCTGCTCCTACAGAATCGAATCATACTGGACATATGAAGTGTGCCACGGGAAGCATGTACGGCAGTACCATGAGGACAAAGAGACGGGGCAGAAGATCAACATTCAGGAATACTTTCTGGGTACcatgaaaaaagagagtgcagAATCAGAAACGGAAAAATCCAGTGACTCTGAATCAGAAAGATCAAACGTCAACACACAGGTGCCAACTAAGAATATAGAGGGTCAGCTGACACCATACTATCCCGTAGAAATGGCACATGGGACTGAATGCTCTCTGAGACAGAATGAACCTCGCTCTACCACGGTGCTGTACGTCTGCCACCCAGAGGCAAAACATGAGATCCTCACGATCGCTGAGGTCATCACCTGTCAGTATGAAGTAGTGGTGCTCACACCCCTCATCTGTCCTCACCCGAAATACAGGTTCAAGTCGTCCCCAGTGAATGACATCTTTTGCCAGGCTCTGGGTGGCTCCCCTCTTAGACCTCAGAGTCTGTCCCAGCTGGATCGTGAGCAGGAAGAGCTGCTCAAACCACCGTTCAGCTCAAGCACCGAAAGAGATCAGAGAGGATCCAGGGAGGATTCATCTCCAGTGAAAGAAGAGGCGTATACTTCTACCCATAAGCCCCTGACAGTGGGTGGGCAAGCCCAGGTCACAGTTGGCACTACCCACATCTCTCGTTTGACTGATGAGCAGCTGATCAAGGAGTTTCTGAGTGGCTCATACTGTCTGCATGGGGGTGTTGGATGGTGGAAGTATGAATTCTGTTATGGAAAGCATGTCCATCAGTATCATGAGGATAAAGAACAAGGAAAGAACATTGTAGTGGTGGGCAGCTGGAACACTGAGGATCATTTTAACTGGGCCAAGAAAAACGTGGCTCGATCTTATCATTTGAAAGATGATGGAGTACAGAAAGTCAAGGTCGTATCACACTTCTATGGCCGTGGAGATGTTTGTGACCTAACAGGGAAACCGAGACAAGTTATAGTCAAGCTCAAGTGTAAGGAGTCAGAGTCTCCTCATGCTGTTACAGTTTACATGCTGGAACCTCAGACCTGTCAATATATTCTCGGGGTTGAGTCACCCGTAATATGCAAGATCTTGGACACTGCAGATGAAAATGGACTTCTTTCAATTCCTAGCTAGCCTATATGGAGGAGATGGTTAGTTTGGAGAATGAACAATATTGAGGCAGTATGATGCTCAGAGGGTGAGATAAAAGTCTAGTACTTCCATAGATTCATGGTGATAACATGGACTTGCCGAATCTCAGACCTCCACCCTTTGAGAAAGTCCCTCAGTGACTGCACTTTCTGTTGTTTGAAGACTAAACAAGgagatctgaagaaccttttacaCCTGCAGATGCAGCTAGGACTGAATTctcaatgttttatttgcaaatctCAAACGtgttaaagaatattttttttcagcttttttcatGCTTTGGCACAGTTGGTCGGCTGTGGGAAAGTCACTTTAAAAGTctaatcaaatgattaatttattaatcaattgATTGTACAAGTTGgtcaactgttttaaatgtacattatttatttgatcagagtTCTGGTAGTTCAGTGCTTGCCATTATCACTGTGCAGATGGAGATGgttattacatgtttttaaaagtgatttaagTAAGTAATTTTGCAATGCAAAGTGCAAGGGAAAATACACTGTCTTGTACACAAAGGAAAGTGAATGTAagtaaacgtttttttaaatcatgagtCATTGATTTGTTTACAATTTGTGATTACCTTCACTTAAATGTAACCACTTCCACTATTGTACAATAAAGTGTTTGGTGAAGGGCTCCTCTTAACTCAAGAACAAATTTATCAagactattttatttcattgcattgCCTGCAATGCTGGTTGTTGCTCAGTCTGTACATGTTCAGTTGAATAAAGTATGAATTTCAAGTC
>XM_043255065.1
TTCCTGTTTTAACTCTAGTCAAACTATCAGCAGTTAGTTGGCTATTAGACCTCACGGAATACCTGTAGTGACCGTGTTTCTCACCCTTCTTCTCCAGCTCTTTCTCTCTAATGTCCCGATAGCGCTTTTGGAGGCTCATCAGGGGCGATGCGGGTGTTTTGGCGTTGGTTTTTGTTGCTGATTTTGGTCGGAGTGTCTGCAAATCGTGCAGGATCTCCTGTGTTTACAGATGAAATCCCCTTCAAAATCAAATGGCCCGGGGCAGACTTCACCCTGTCAACGTCAGGAGGCCTGTACAAAGAAGATGACTATGTTATCATGACAactacagaaaaagaaaagtacaaATGTTTATTGCCGTCTTTGTCTGGCAACCAGGAGGATGATGTGAAGGAGTATGATGGGCCGAGTCCAGCTGTGCTGCTGGAGCCGTTGTTCAAACAGAGCAGCTGCTCCTACAGAATCGAATCATACTGGACATATGAAGTGTGCCACGGGAAGCATGTACGGCAGTACCATGAGGACAAAGAGACGGGGCAGATCAACATTCAGGAATACTTTCTGGGTACcatgaaaaaagagagtgcagAATCAGAAACGGAAAAATCCAGTGACTCTGAATCAGAAAGATCAAACGTCAACACACAGGTGCCAACTAAGAATATAGAGGGTCAGCTGACACCATACTATCCCGTAGAAATGGCACATGGGACTGAATGCTCTCTGAGACAGAATGAACCTCGCTCTACCACGGTGCTGTACGTCTGCCACCCAGAGGCAAAACATGAGATCCTCACGATCGCTGAGGTCATCACCTGTCAGTATGAAGTAGTGGTGCTCACACCCCTCATCTGTCCTCACCCGAAATACAGGTTCAAGTCGTCCCCAGTGAATGACATCTTTTGCCAGGCTCTGGGTGGCTCCCCTCTTAGACCTCAGAGTCTGTCCCAGCTGGATCGTGAGCAGGAAGAGCTGCTCAAACCACCGTTCAGCTCAAGCACCGAAAGAGATCAGAGAGGATCCAGGGAGGATTCATCTCCAGTGAAAGAAGAGGCGTATACTTCTACCCATAAGCCCCTGACAGTGGGTGGGCAAGCCCAGGTCACAGTTGGCACTACCCACATCTCTCGTTTGACTGATGAGCAGCTGATCAAGGAGTTTCTGAGTGGCTCATACTGTCTGCATGGGGGTGTTGGATGGTGGAAGTATGAATTCTGTTATGGAAAGCATGTCCATCAGTATCATGAGGATAAAGAACAAGGAAAGAACATTGTAGTGGTGGGCAGCTGGAACACTGAGGATCATTTTAACTGGGCCAAGAAAAACGTGGCTCGATCTTATCATTTGAAAGATGATGGAGTACAGAAAGTCAAGGTCGTATCACACTTCTATGGCCGTGGAGATGTTTGTGACCTAACAGGGAAACCGAGACAAGTTATAGTCAAGCTCAAGTGTAAGGAGTCAGAGTCTCCTCATGCTGTTACAGTTTACATGCTGGAACCTCAGACCTGTCAATATATTCTCGGGGTTGAGTCACCCGTAATATGCAAGATCTTGGACACTGCAGATGAAAATGGACTTCTTTCAATTCCTAGCTAGCCTATATGGAGGAGATGGTTAGTTTGGAGAATGAACAATATTGAGGCAGTATGATGCTCAGAGGGTGAGATAAAAGTCTAGTACTTCCATAGATTCATGGTGATAACATGGACTTGCCGAATCTCAGACCTCCACCCTTTGAGAAAGTCCCTCAGTGACTGCACTTTCTGTTGTTTGAAGACTAAACAAGgagatctgaagaaccttttacaCCTGCAGATGCAGCTAGGACTGAATTctcaatgttttatttgcaaatctCAAACGtgttaaagaatattttttttcagcttttttcatGCTTTGGCACAGTTGGTCGGCTGTGGGAAAGTCACTTTAAAAGTctaatcaaatgattaatttattaatcaattgATTGTACAAGTTGgtcaactgttttaaatgtacattatttatttgatcagagtTCTGGTAGTTCAGTGCTTGCCATTATCACTGTGCAGATGGAGATGgttattacatgtttttaaaagtgatttaagTAAGTAATTTTGCAATGCAAAGTGCAAGGGAAAATACACTGTCTTGTACACAAAGGAAAGTGAATGTAagtaaacgtttttttaaatcatgagtCATTGATTTGTTTACAATTTGTGATTACCTTCACTTAAATGTAACCACTTCCACTATTGTACAATAAAGTGTTTGGTGAAGGGCTCCTCTTAACTCAAGAACAAATTTATCAagactattttatttcattgcattgCCTGCAATGCTGGTTGTTGCTCAGTCTGTACATGTTCAGTTGAATAAAGTATGAATTTCAAGTC

Function

symbol description
erlec1 Predicted to be located in endoplasmic reticulum. Is expressed in several structures, including anterior axial hypoblast; axial mesoderm; axis; hatching gland; and otic placode. Orthologous to human ERLEC1 (endoplasmic reticulum lectin 1).

NR:

description
endoplasmic reticulum lectin 1-like isoform X2

GO: NA

KEGG:

id description
K14008 ERLEC1, XTP3B; endoplasmic reticulum lectin 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255063.1 False 2399 mRNA 0.43 14 13679287 13683990
XM_043255064.1 True 2410 mRNA 0.44 15 13679287 13684104
XM_043255065.1 False 2396 mRNA 0.43 14 13679287 13683990

Neighbor

gene id symbol gene type direction distance location
memo1 memo1,LOC107654980,LOC107705412 coding downstream 99191 13570790 ~ 13580096 (-)
LOC122356824 LOC107705409,LOC107600568,LOC107654911,LOC107683712 coding downstream 273744 13390572 ~ 13405543 (-)
btbd3b btbd3b,LOC107654989,LOC107705408,LOC107585513,LOC107739865,LOC107679136,LOC107600567 coding downstream 394665 13275699 ~ 13284622 (-)
sptlc3 sptlc3,LOC107654988,LOC107600566,LOC107662809,LOC107739864,LOC107705357 coding downstream 475055 13181337 ~ 13204232 (-)
ism1 ism1,LOC107654990,LOC107739863,LOC107705406,LOC107662810 coding downstream 499834 13166439 ~ 13179453 (-)
LOC122356826 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 coding upstream 43638 13727742 ~ 13735822 (-)
LOC122356402 mycla,LOC107680680,LOC107739875,LOC107553198,LOC107576479,LOC107654967 coding upstream 55545 13739649 ~ 13743024 (-)
LOC122356831 erlec1,LOC107654972,LOC107679899 coding upstream 162737 13846841 ~ 13852454 (-)
LOC122356415 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 coding upstream 174726 13858830 ~ 13884172 (-)
zgc:153911 LOC107739899,LOC107683281,LOC107553199,LOC107705423 coding upstream 252664 13936768 ~ 13938825 (-)
G93562 NA non-coding downstream 4176 13579527 ~ 13675111 (-)
G93591 LOC107705361,LOC107654976,LOC107602941 non-coding downstream 13027 13665809 ~ 13666260 (-)
G93588 LOC107654976,LOC107553194,LOC107602941 non-coding downstream 15376 13661750 ~ 13663911 (-)
G93583 NA non-coding downstream 23938 13654379 ~ 13655349 (-)
LOC122356419 NA non-coding downstream 28554 13622766 ~ 13650733 (-)
G93855 NA non-coding upstream 1843 13685947 ~ 13688626 (-)
G93879 NA non-coding upstream 76942 13761046 ~ 13930294 (-)
G93905 NA non-coding upstream 503435 14187539 ~ 14189904 (-)
G94003 NA non-coding upstream 1188328 14872432 ~ 14873014 (-)
G94016 NA non-coding upstream 1296892 14980996 ~ 14995700 (-)
srd5a2b srd5a2b,LOC107739895,LOC107654923,LOC107683892,LOC107705374,LOC107602938 other downstream 111262 13564422 ~ 13568025 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other downstream 120453 13520413 ~ 13558834 (-)
LOC122356823 LOC107654911,LOC107705409,LOC107600568,LOC107683712 other downstream 354236 13309952 ~ 13325051 (-)
LOC122356414 NA other downstream 1081985 12557077 ~ 12597302 (-)
tmem234 tmem234,LOC107675523,LOC107576456 other downstream 1248509 12429197 ~ 12430778 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other upstream 8922 13693026 ~ 13718314 (-)
LOC122356386 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 other upstream 214154 13898258 ~ 13904702 (-)
G93875 LOC107680680,LOC107739875,LOC107576479,LOC107553198,LOC107705377,LOC107654967 other upstream 226235 13910339 ~ 13911837 (-)
LOC122356235 LOC107705430,LOC107683441,LOC107553204,LOC107602960,LOC107654922 other upstream 395428 14079532 ~ 14082790 (-)
srsf5a srsf5,srsf5a,LOC107683426,LOC107602962,LOC107654954,LOC108411053 other upstream 476219 14160323 ~ 14164414 (-)

Expression


Co-expression Network