memo1 (memo1,LOC107654980,LOC107705412)


Basic Information

Item Value
gene id memo1
gene name memo1,LOC107654980,LOC107705412
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 13570790 ~ 13580096 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255086.1
CCATCCGGATAACAGAGACAAACTTGGCAGCGAGCGGATGAACTGGTCGGATCTTTGTTCTTCACAGCCAGACTATCAACCTCTTTATATTTTTGCGAATCGTCAATTATATGTCTCACGTTTATATCAAGATTATATAGAATACTCCTTGTCTGGGCACACAGCTTCAGCACAGGCATATACTTTTTGAGCTAGCATATTTTCCTAGTGTTTTTAGTTCATTCTTCCCCCCACCGACGAGGTTTTATTGGACCAAGATAGGCGGCGCGGGCACCAAGATGTCGAACCGGATGGTGTGCAGAGAAGCGAGCCACGCCGGCAGCTGGTACACGGCCTCAGGATCCCAGCTTAACGCACAACTCGAGGGCTGGTTATCTCAAGCACAATCTACAGCCGGTCCTGCTAGAGCCATAATAGCACCGCACGCTGGCTACACTTACTGCGGTGCGTGTGCCGCCCACGCCTACAAGCAGGTGGACCCCTCCATCACTCGGAGGGTGTTCATTCTTGGCCCCTCTCACCATGTGCCGCTGTCTCGCTGTGCCCTCTCCCCCGCCGAGGTCTACAGAACGCCACTGTATGACCTGAGGATCGACCAGAAGGTTTACGCTGATCTGTGGAAAACGGGCATGTTTGAGAGGATGAGTCTGCAGACAGATGAGGACGAACACAGCATTGAGATGCACCTGCCTTATACCGCTaaagccatggagagccatAAAGATGAGTTCAGCATCGTCCCTGTGCTGGTGGGAGCTCTAAGTGAATCTAAAGAGCAGGAATATGGCAAGCTGCTTAGCAAATACCTGGCTGATCCTTCTAATCTTTTCATCATCTCCTCTGACTTCTGCCACTGGGGTCAACGTTTCCGTTACACCTACTACGATGAAAGTCAAGGGGAGATCTACAGATCTATCGAGCACCTTGACAAAATGgGAATGGGAATTATAGAACAGTTGGACCCCATCTCCTTTAGCAATTATTTGAAGAAATATCATAATACTATTTGTGGTCGCCATCCCATCGGCGTTCTTCTAAATGCTGTGGCGGAACTGAAAAAGAACGGCATAGACATGAACTTCTCTTTCCTGAACTATGCGCAGTCGAGCCAGTGCAGAAACTGGTCGGACAGCTCTGTGAGTTACGCTGCTGGAGCTCTCGTCGTTCATTGAGGTGAACTTTCCCAGGAGCCACGGAGCCTCCTAGAAGACCCCAGCCCCTCCCACCCGTTTCCCCATCCTCCCTCGCCTCTTCTATAGGAAGGACATACGAAGCAGCTGGGAATCCTCATACATACCCCGAATCCAGATGTAACGTTAGATACAAACGTCCTCTTCCTAAAGCCTTCCCTGTACCCCGTTTTCCACGTGAGGCAACTCGGATGATGCTATAGCTTGAAGTACAGCCGCAGTTTTTTGGGTGTTGCAAGGTCAGATTTTtggttggtttttttgtttttttttcttgtttgttgggGGGGGTCTTAATGAGGCAAAATCCACATTTGACCTTCCAAGGACGTTAGGTGTCTGAAGAGCCCTTGTGTAATTTAAAAGCAAGacacatttaaagtttaaataaaagaaataaaaccatcGACATTGCACTCTTTTTGCAAGTCTGCATATATAATCCACATAATGTCTCACCTAATGAGAAAAAGGAAATTGACGGACTGCAACATGCTATGTCCATGTACACCCTGAGAATTGTAGTAATAGCTACTGCGTTGGTCctgttgtagtttttaaagGGCTACACAATACCCACTAACCCTCCACTGTTCTGGATATAccaaaaatagatttatttcatCTAATCTTTTATTGTAGTCAAATTAAAACGTTTCTGATTGTTATATTccgttctttttattttccctttGATTACCATTATTTAGCTTTCTAGTTTTACTATGCGTTTGACATATAATCTCAGACTGTGTGAAAGAATATAGTAGTGCTTGAAGTCGACAGGAAGTGCAGGCTGCCTCAAAATGGCAGTTCAGCCTCAACTTAAAAATCGTATTGGGGGGGGGATTTATTTTGGTTAGTCTGAAACAATTTTATATTCTCATGCAAGTTAGCAGCCATGTTTAACAGCTGACTAGTAGTTAGTGATGCACACCCGTATCGAGGAACCGCCGGAGGTGGATTTTCTGAACGGCATAGGCATTTTGTCTGGCTTTTCTCCTTAACCCATCTACTCCCAAAGAGCACAATGCAGCAAGATTTTTCCTGGGTTACCATCGGAAGGAAAACGGCAAGGCTCCTGTACATCCCCATCAAGGTTTGAATGTCTCAAACCAAATcctcaaacagaaaacagacaaaGCATGTCACACCATGCAGATGTGCCTTGGGTCAGtgttaaacatgtttttttttttgttttgtttttttttggtcctgTGCTTTCCACCCTTCATTTATCCACTAAAAAGACTTGATTTAGTCTGTTCAATCAGTTTTTGCCGTTTTCAAAGTAGGGGAAGAGATTCATCGGCTTCACCCAGCACAACACCTGTTCTTGTACTGTTAGAAttgtttcaatttttattttaatttcagtaccgtttattattattattattctaactATTATTGCGTAGAAACTAACAGTTCACACGTTGTCAAACCTATGTCGAAATTAATTGAAGCGCTCCTTTCCGGAGTCATTTTTGAATCTCAGGTTACATTGAAGCATTACAGAATTCTCGCCAGATATGACAAGGGTCATGGCTGATGTTGCAAAGAAACAATAAAGTGTAATGACAAACGTTA

Function

symbol description
memo1 Is expressed in Kupffer's vesicle; central nervous system; epiphysis; tail bud; and telencephalon. Orthologous to human MEMO1 (mediator of cell motility 1).

NR:

description
protein MEMO1

GO: NA

KEGG:

id description
K06990 MEMO1; MEMO1 family protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255086.1 True 2783 mRNA 0.44 9 13570790 13580096

Neighbor

gene id symbol gene type direction distance location
LOC122356824 LOC107705409,LOC107600568,LOC107654911,LOC107683712 coding downstream 165247 13390572 ~ 13405543 (-)
btbd3b btbd3b,LOC107654989,LOC107705408,LOC107585513,LOC107739865,LOC107679136,LOC107600567 coding downstream 286168 13275699 ~ 13284622 (-)
sptlc3 sptlc3,LOC107654988,LOC107600566,LOC107662809,LOC107739864,LOC107705357 coding downstream 366558 13181337 ~ 13204232 (-)
ism1 ism1,LOC107654990,LOC107739863,LOC107705406,LOC107662810 coding downstream 391337 13166439 ~ 13179453 (-)
kif16bb kif16bb,LOC107654912,LOC107600573 coding downstream 441078 13097691 ~ 13129712 (-)
erlec1 erlec1,LOC107654972,LOC107679899 coding upstream 99191 13679287 ~ 13684104 (-)
LOC122356826 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 coding upstream 147646 13727742 ~ 13735822 (-)
LOC122356402 mycla,LOC107680680,LOC107739875,LOC107553198,LOC107576479,LOC107654967 coding upstream 159553 13739649 ~ 13743024 (-)
LOC122356831 erlec1,LOC107654972,LOC107679899 coding upstream 266745 13846841 ~ 13852454 (-)
LOC122356415 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 coding upstream 278734 13858830 ~ 13884172 (-)
G93513 NA non-coding downstream 222905 13347401 ~ 13347885 (-)
LOC122356420 NA non-coding downstream 297649 13271278 ~ 13273141 (-)
LOC122356418 NA non-coding downstream 346254 13208410 ~ 13224536 (-)
G93472 NA non-coding downstream 408063 13162489 ~ 13162727 (-)
G93471 NA non-coding downstream 408420 13162145 ~ 13162370 (-)
LOC122356419 NA non-coding upstream 42670 13622766 ~ 13650733 (-)
G93583 NA non-coding upstream 74283 13654379 ~ 13655349 (-)
G93588 LOC107654976,LOC107553194,LOC107602941 non-coding upstream 81654 13661750 ~ 13663911 (-)
G93591 LOC107705361,LOC107654976,LOC107602941 non-coding upstream 85713 13665809 ~ 13666260 (-)
G93855 NA non-coding upstream 105851 13685947 ~ 13688626 (-)
srd5a2b srd5a2b,LOC107739895,LOC107654923,LOC107683892,LOC107705374,LOC107602938 other downstream 2765 13564422 ~ 13568025 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other downstream 11956 13520413 ~ 13558834 (-)
LOC122356823 LOC107654911,LOC107705409,LOC107600568,LOC107683712 other downstream 245739 13309952 ~ 13325051 (-)
LOC122356414 NA other downstream 973488 12557077 ~ 12597302 (-)
tmem234 tmem234,LOC107675523,LOC107576456 other downstream 1140012 12429197 ~ 12430778 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other upstream 112930 13693026 ~ 13718314 (-)
LOC122356386 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 other upstream 318162 13898258 ~ 13904702 (-)
G93875 LOC107680680,LOC107739875,LOC107576479,LOC107553198,LOC107705377,LOC107654967 other upstream 330243 13910339 ~ 13911837 (-)
LOC122356235 LOC107705430,LOC107683441,LOC107553204,LOC107602960,LOC107654922 other upstream 499436 14079532 ~ 14082790 (-)
srsf5a srsf5,srsf5a,LOC107683426,LOC107602962,LOC107654954,LOC108411053 other upstream 580227 14160323 ~ 14164414 (-)

Expression


Co-expression Network