cfl1l


Basic Information

Item Value
gene id cfl1l
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12557143 ~ 12559518 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255090.1
CATCTGACTCACCTGAGCGTTTACATGACATAAAGCATCACTTTTATGGCTTCCTTATCATAAacgcaaaatataaataattgggCGATGACAGGATATTTAACACAGCCACCCCGTAGTTAGAAGTGTTTGCAGCAACGCAGCCAGCAGGTAGAGAGCCGGGTCATCGGGGACTGGTCTGTTCTGAAGAGGGTGGGTTTAGATCCGCGCCCCTGAGACTCTTCTTCACTCTGCAAGGCAACGACGTGCTTCTTTCCTCCGTTTCAGAGCAAGCGTGAGCCATGGCCTCAGGTGTAGCCATCAGTGATGAGGTGATAAGTAAGTATGACTTAATCCGGGTGCGTCATGCAGGAACTGATGCTGGGGAAAGGCTAAAACTTCTGGTCATGTGTTTGAGCAAAGACCAAAAGAGTATCGTGGTGGACCATGACAACTGCCTGACAGTCAAAGATGTGGGGACCACAGATGTCTTAAAGAAGATCCTCGATAAGTTTCCTCCCAAAGATTGCCGCTACGGCCTGTACGACTGCTCCTATGTGAACAAGGAGAGCGTGAAGGAGGACCTGGTCTTCATCTTATCGGCCCCTGAATCTGCCCCATTAAAGAGCAAAATGGTCTATGCAAGTTCAATGGTTGCTCTTAAGAACAAACTGCAAGGTTTGAAATATGAGTGGCAAATTAATGAACCTGGAGACAGAGACCCATCATGCCTTGTGGAGAAACTTGGTGGAAGGGACACAGTAAAGTCTTTGGAGGGGCAGCTTGTGTAAAATTAAGAGCAATCAGACCAATGACCCCACAGCCCTCTTATCAGTCtgttatgacaaaaaaaaaaaataaataaataagagataaaatatatgctaataaactttgtatttcatttgtattggaatcagttttttttttacatttaatcaattgAGAATTCGTATTTATTCCACATTTAcaattaatgattattattaagcaAATACCAACAAATATAGTATAATGACAGCAGAAAACCTGGGGTAGGCATTACAATTGGACTgtgtatttgaaaaataaaatcatgtgaTTTTCCAAAAA
>XM_043255091.1
AACTGCATCTGACTCACCTGAGCGTTTACATGACATAAAGCATCACTTTTATGGCTTCCTTATCATAAacgcaaaatataaataattgggCGATGACAGGATATTTAACACAGCCACCCCGTAGTTAGAAGTGTTTGCAGCAACGCAGCCAGCAGGTAGAGAGCCGGGTCATCGGGGACTGGTCTGTTCTGAAGAGGGTGGGTTTAGATCCGCGCCCCTGAGACTCTTCTTCACTCTGCAAGGCAACGACGTGCTTCTTTCCTCCGTTTCAGAGCAAGCGTGAGCCATGGCCTCAGGTGTAGCCATCAGTGATGAGGTGATAAACCAAAAGAGTATCGTGGTGGACCATGACAACTGCCTGACAGTCAAAGATGTGGGGACCACAGATGTCTTAAAGAAGATCCTCGATAAGTTTCCTCCCAAAGATTGCCGCTACGGCCTGTACGACTGCTCCTATGTGAACAAGGAGAGCGTGAAGGAGGACCTGGTCTTCATCTTATCGGCCCCTGAATCTGCCCCATTAAAGAGCAAAATGGTCTATGCAAGTTCAATGGTTGCTCTTAAGAACAAACTGCAAGGTTTGAAATATGAGTGGCAAATTAATGAACCTGGAGACAGAGACCCATCATGCCTTGTGGAGAAACTTGGTGGAAGGGACACAGTAAAGTCTTTGGAGGGGCAGCTTGTGTAAAATTAAGAGCAATCAGACCAATGACCCCACAGCCCTCTTATCAGTCtgttatgacaaaaaaaaaaaataaataaataagagataaaatatatgctaataaactttgtatttcatttgtattggaatcagttttttttttacatttaatcaattgAGAATTCGTATTTATTCCACATTTAcaattaatgattattattaagcaAATACCAACAAATATAGTATAATGACAGCAGAAAACCTGGGGTAGGCATTACAATTGGACTgtgtatttgaaaaataaaatcatgtgaTTTTCCAAAAA

Function

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255090.1 True 1071 mRNA 0.42 4 12557148 12559518
XM_043255091.1 False 992 mRNA 0.41 5 12557143 12559518

Neighbor

gene id symbol gene type direction distance location
LOC122357113 NA coding upstream 63404 12488581 ~ 12493739 (+)
brf1a brf1a,LOC107655005,LOC107675573,LOC107705399,LOC107724496,LOC107588563 coding upstream 71481 12450571 ~ 12485662 (+)
dcdc2b LOC107654928,LOC107588713,LOC107724332,LOC107675534 coding upstream 128019 12423676 ~ 12429124 (+)
iqcc iqcc,LOC107705368,LOC107588566,LOC107655007 coding upstream 133799 12420615 ~ 12423344 (+)
ccdc28b ccdc28b,LOC107675524,LOC107585497,LOC107705395,LOC107588714,LOC107654929 coding upstream 136674 12414868 ~ 12420469 (+)
ephx5 ephx5,LOC107724402,LOC107585505,LOC107675570,LOC107705353,LOC107654996 coding downstream 46325 12605843 ~ 12610037 (+)
macrod2 macrod2,LOC107600572 coding downstream 54259 12613777 ~ 13074499 (+)
jag1b jag1,jag1b,LOC107655002 coding downstream 934301 13493819 ~ 13521130 (+)
mkks mkks,LOC107683876 coding downstream 999575 13559093 ~ 13563325 (+)
wdr27 wdr27,LOC107739896,LOC107585515,LOC107683903 coding downstream 1021708 13581226 ~ 13617273 (+)
G93280 NA non-coding upstream 106697 12448374 ~ 12450446 (+)
G93267 NA non-coding upstream 171525 12385307 ~ 12385618 (+)
G93219 NA non-coding upstream 176292 12379709 ~ 12380851 (+)
G93222 NA non-coding upstream 183012 12363065 ~ 12374131 (+)
G93200 NA non-coding upstream 290077 12202742 ~ 12267066 (+)
G93295 NA non-coding downstream 8966 12568484 ~ 12569100 (+)
G93285 NA non-coding downstream 36404 12595922 ~ 12597301 (+)
G93306 NA non-coding downstream 42673 12602191 ~ 12602541 (+)
G93474 NA non-coding downstream 604519 13164037 ~ 13164313 (+)
G93485 sptlc3,LOC107705357,LOC107662809,LOC107654988,LOC107600566 non-coding downstream 628067 13187585 ~ 13191795 (+)
jag2a jag2a,LOC107654986,LOC107675567,LOC107724379,LOC107585503,LOC107705348,LOC107600569 other upstream 22072 12502385 ~ 12535071 (+)
LOC122357045 LOC107654926,LOC107705370,LOC107588681,LOC107675516 other upstream 120500 12431919 ~ 12436643 (+)
G92977 dhrs7,LOC107588602,LOC107548599,LOC107757139 other upstream 952291 11603697 ~ 11604852 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other upstream 964543 11571660 ~ 11592600 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other upstream 1143628 11389385 ~ 11413515 (+)
G93296 rrbp1 other downstream 12113 12571631 ~ 12575212 (+)
mgme1 mgme1,LOC107675546,LOC107654997,LOC107585523 other downstream 27368 12586886 ~ 12588998 (+)
tasp1 tasp1,LOC107705405,LOC107654993,LOC107600565,LOC107662811,LOC107585512,LOC107739887 other downstream 574955 13134473 ~ 13158440 (+)
G93613 NA other downstream 1180089 13739607 ~ 13909603 (+)
LOC122356417 mfsd2aa,LOC107654966,LOC107705421,LOC107602949,LOC107739898 other downstream 1189617 13749135 ~ 13760734 (+)

Expression


Co-expression Network