zgc:154058 (zgc:154058,LOC107733751,LOC107582519,LOC107690163,LOC107570530,LOC107708463,LOC103041715,LOC108441772,LOC108263524)


Basic Information

Item Value
gene id zgc:154058
gene name zgc:154058,LOC107733751,LOC107582519,LOC107690163,LOC107570530,LOC107708463,LOC103041715,LOC108441772,LOC108263524
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 1299234 ~ 1327785 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255214.1
GAGCCGGTTTGGGGTCATGCAACAAGTATAAATGCACATTGATGAGCAGAGGGAGACAGGCTGGCGAAGGCGAAAGAAGTGGATGTTTTGAGGGGAGCAGGAGAGGACTGTGTGCAGGAGATGTCTCTGTGGATGATATTACCCGTCAGCCTCCCAGCTCTCACCATCACTGGAATATGGGTCGTGTATGCCATGGCCTTGTACAACCAGCATGTCTGTCCTGTGGACAACTGGATGTATAACCAGTCATGTGAGGTGGATCTGCCATTGCAGAGGGGACCGACCATGTGCTGTACTCTGGACAATGTTCCTCTTATAAGTAAATGTGGCACACTTCCTCCAGAGAGCTGCTTCTTCAGTCTCATCTGCAGCACTGGATCCTTTATGGTGATGGTGATAGTGTTGTTACGCTATGCCCATGTGATAGAGAAGCACCAGAACTGTGTGTTAAACACAGCAAGTCTCTCCACCGGCTGGATCTGTGCTGCAGGTCTCATCATGGTCGGCAACTTCCAGGTGGATAACGCTAAGGTTCTTCACTATGTTGGAGCAGGGGTAGCCTTCCCCACCAGtatgctgtttgtgtgtcttcAGTCTGCGCTGACTTACCGTCTGGCCAAGACTCAGGGAGAATATAATATGGGTCATTTGCGTCTCTTTATGACCCTGCTGGCCTTTGTGGCCCTGGTGCTCAGCGGGGTGTTTTTTGTCCAGGAGAGTTTTGTCCTGCAACATGCATCGGCCATTTTCGAGTGGGTGTTCTGTGTCATTATTATGCTGTTCTACGGCACGTTCGCTTTTGAATTCGCCGGGATATCTAGTGACACGATGATGGTGCTGGCCCAAGGGCAATCTCTACAGTCCGTAAGCCGAGACCACAAGATGGAGTCTCTCGCTGGGGGCAGCCAGCACCAGCCTGAGAGCCTGTCCATGCTGTAACCTCAGTGTCCCGTATCTCTCTCAACACTacgaaaaaaaacactgtaaccGAAGAGGGAAAGTTACAGAAACTGGACGTGGCTCTCGTACACCTTTGCCAAAGGAACCAGCTcagattttgcacatttttgagaGACTTCTTCGCTCTGGGGGGACCTTTTGAATCGCACAGCTTCCAAGCTGGAAACAACAAAGATCATTGCCTGGATGTATTGGAGTTTCCATTAGATCTTATTGGGATTTTTAAGTATCTGCGTTACTTGGATAAAGAGACTACAGACTGCTAGTTGGCAAAATTACACGTCCATTGGTGAAACCAGAGGACCGCTACGTCAATGGTGTAGTAAACTAAACCCGAAGCCTTTTGCAACTGTCAGCACTCAAGCATTTTAACGTAGTGCctcaaaacaaatgttattgTGCCAATTCCATACAGTGCAAGGCAGTGGATCCCAAAATGCTGATGTTTTCCGTgcctttagtttttttccaaagtCAGAGATggttaaataacattttattgtcaCTTATATCTGCTGTCTGCTAACCGATCAAGGTGTTTCATTTTGCCTTAATCGCCATATGCtgtctgaaatgtattttccagGAGCTTGTCATTACCGATGTGCCTTAAACCAAAAACCAAATACTGATATTTAATAGAGATCTATGTCCATAGTCTAGGCGTGTATTTTTTTTGATACGTAGCAAATATTATGCTGGTTGTAAACAACTAAGCTGAACGAGATCAGCAAAAACCTCTCGTGAAACAGGAGCATAAGCTTATCACATTAAGTCGCCAGTAGTTGGTGCCATTCCAGATGTCATGTTAGAGTCTATGAGTATTGTACATTGTGACCAAATGTAATTGAGAAGAGAGCTTGTCCTGAGGTCGGTGTGATCATAGGTTTCCCTCTTTCTGTCACTGTGGGAATtgttgtgtgtgttgggggTTTATGGGAGTTGGTTAAAAGGAAGCGTCTTGAAACATGAAGCCGCCCTTTAATGTTAAGGGTGACTAGTTTAGGTGTTCTTAagtttttgtcagctgtttttGCAGACAAAATGATTTGCAGCAGGACTGCAAGGTCAtaattggttttgttttgaaaaacagaTGCAATTTGGTTTACAGTGGTCAAATGTTTTCACACTaccagcatgaaaaaaaaatcacattgttcCTCAGCTAATATCAAAGTTTTGTCAagagttttgtcattttatttgtcaGGATCAGAGCCATATTTATACTACGAGTGCCGTCCTGAAAACATCTTTCGCGCCATTTCAGTTTACTAATTCTCTTCGCTCAGGAATTTCagatgtctttgctgtcacatATCTTCTCTCTGCATTCAAGACTGCATCAATCCACCAGATATAAGTGAAAAATGTGCCATTTCCATTACTTGTTCAGAACATTTCCTTTATAGAGAGCTTTATTTTGCTTCAAATACATCTTGTAATACTGTTAAACCCATAATTtggtttaatttgttgtttaaacCATTTTCtcctaaatatttattatattgcttAAAGTAAtcgttaataaaaaaaacaactatatgCTATCTTTCATTATGTTTCAAATCCAAATGCTGTCATGTTTCCTGTGGAAGTCAAAATAAGAAATTTGAAGAATTGCTGTGCAGCTCTATTCCTCACAAGACCACCATAAGTATCTCACGAGACATTTCAGTTGTTCCATGTGTCATTTCATTGATAATGTTACCCTTTgata

Function

symbol description
zgc:154058 Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
transmembrane protein 150A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255214.1 True 2686 mRNA 0.43 7 1299234 1327785

Neighbor

gene id symbol gene type direction distance location
LOC122356485 LOC107690198,LOC107582551,LOC107733679 coding upstream 2301 1292045 ~ 1296933 (+)
LOC122356446 LOC107690199,LOC107678592,LOC107708458 coding upstream 8220 1288427 ~ 1291014 (+)
tlr4al LOC107747448,LOC107690165,LOC107678593,LOC107582517,LOC107576986 coding upstream 15547 1280906 ~ 1283687 (+)
LOC122356482 LOC107690165,LOC107678593,LOC107747448,LOC107678592,LOC107708458,LOC107708381 coding upstream 21909 1276525 ~ 1277325 (+)
si:ch211-198a12.6 si:ch211-198a12.6,LOC107747450,LOC107690167,LOC107589522,LOC107582518,LOC107678580,LOC108263519,LOC108444387,LOC103030417 coding upstream 23819 1269936 ~ 1275415 (+)
pdzd7a pdzd7a,pdzd7,LOC107690160,LOC107570534,LOC107678494 coding downstream 29483 1357268 ~ 1377953 (+)
prorsd1 LOC107701441,LOC107571560 coding downstream 355465 1683250 ~ 1685179 (+)
LOC122356760 pim3,LOC107732271 coding downstream 440948 1768733 ~ 1770226 (+)
foxg1d foxg1,LOC107709474,LOC107680282,LOC107565904,LOC108443822 coding downstream 488033 1815818 ~ 1818092 (+)
irf1a LOC107571076,LOC107725011,LOC107680285,LOC107565919 coding downstream 533146 1860931 ~ 1864358 (+)
LOC122356494 NA non-coding upstream 2 1298585 ~ 1299232 (+)
G89754 NA non-coding upstream 134846 1080132 ~ 1164388 (+)
G89775 NA non-coding upstream 150131 1148271 ~ 1149103 (+)
G89764 NA non-coding upstream 152374 1129089 ~ 1146860 (+)
G89721 NA non-coding upstream 269939 1026973 ~ 1029295 (+)
G89821 mat1a,LOC107582520,LOC107570529,LOC107733750,LOC107678534,LOC107708460 non-coding downstream 4053 1331838 ~ 1335134 (+)
G89842 NA non-coding downstream 118407 1446192 ~ 1447605 (+)
G89843 NA non-coding downstream 121261 1449046 ~ 1449943 (+)
G89844 sema4ga,LOC107733683,LOC107708465,LOC107678493,LOC107690158,LOC107582524 non-coding downstream 122580 1450365 ~ 1450830 (+)
G89855 NA non-coding downstream 210517 1538302 ~ 1539354 (+)
G89770 LOC107582509,LOC107690188,LOC107747458 other upstream 159039 1139159 ~ 1140195 (+)
comtd1 comtd1,LOC107690183,LOC107582505,LOC107747463,LOC107678519 other upstream 287987 1008268 ~ 1011247 (+)
G89631 LOC107698159,LOC107747466 other upstream 621633 380964 ~ 677601 (+)
dlg5a dlg5a,LOC107708441,LOC107698145,LOC107678499 other upstream 922663 323731 ~ 376571 (+)
fignl1 fignl1,LOC107721231,LOC107698153,LOC107678605 other upstream 1062341 190797 ~ 236893 (+)
selenou1a fam213aa,fam213a,LOC107690162,LOC107733773,LOC107582522 other downstream 14311 1342096 ~ 1345863 (+)
G89846 NA other downstream 141620 1469405 ~ 1470135 (+)
LOC122356486 march8,LOC107690179,LOC107582508,LOC107708446 other downstream 253573 1581358 ~ 1613330 (+)
mpc1 mpc1,LOC107693783,LOC107725004,LOC107565920,LOC107709408,LOC107571070 other downstream 512550 1840335 ~ 1842108 (+)
G90010 LOC107676803 other downstream 544399 1872184 ~ 1872591 (+)

Expression


Co-expression Network