LOC122356476 (LOC107582116,LOC107753727,LOC107699114,LOC101886535,LOC107558210,LOC107709369)


Basic Information

Item Value
gene id LOC122356476
gene name LOC107582116,LOC107753727,LOC107699114,LOC101886535,LOC107558210,LOC107709369
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2166620 ~ 2175433 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255219.1
TACAAGCAGAACTCTATTTTATGGCGTTTCATTGAATTATTTTCCtgtcaaaaatgaaacatgGTCCCGTGATAAAACCGATGAACGGGTAATTGAGTTGCATGCTGGGTTTTGAGGATTGCCCAGAGAAACTAGGCAGTGTTTACACATAATCAGCCGATAATACCACTGCCAGCATGGAAATTGTACTTTCCCGCCCACCGTGACTGAAAACAAGCGATTCCAAAACAAGCCGATGAATTACTTATGCAGGCTTTTGTTGGGCTGGAAACCGGCATGAAAGAGCAGTGGAAAGACGTCAGAACGCGTGGGTGGGAGTGTTTTctgaaggacacacacacactcacacacacacacacacacacagagagagcagCATGTCGCGGTCACAGGAGAGCAGAGGCTTCAGTCAGCTCATGCCTGGAGATGAAACAGGTGGACTCTACATCTTGATGCTGGTGTCCTTCTTCCCTCTCTACTACTGGTGCTTCACAGACGAAAGTACTGAGGATGAGTTTGAAATCTCTTTTGTTTGCCATCGGCCTGATGATCTGGACATACTACAGGAAGAGACTGAATTCAGCAAGAAAGAGCTGCAGTTCCTCTACAGGgccttcaaaaatgagtGTCCCAGTGGAGTGGTGACTGAGGACGTGTTCAAACTCATTTACTCTCAGTTCTTCCCACAGGGAGaTTCAAGAATTTATGCACATTACCTCTTTGAGGCATTTGACACTAACAGGAATGGCTGTTTGAGTTTTAAGGAGTTTGTTGCTGGTCTGTCACTCATCCTTAGAGGCTCAATATATGACCGGCTAAATTGGGCATTTAATTTCTATGATCTTGATAAAGATGGATTCATCACAAGAGAGGAGATGATGAAGATCATGAAGTCGATTTATAAGTTGATGGGGAAGTATGTGTATCCCTCCATACATGATGATACTCCCAGAGAGCATGTGGAAAACTTCTTTcagaaaatggaCAGAAACCGTGATGGAATGATCACCATTGAGGAGTTCATGGAGTCATGTCAAAAGGATGCAAATCTCATGCGGTCAATGCGGCTGTTTGACAGTGTCTTTTAGGAGTTTCTGCCCATCTGTGGACGTCTCTCTCCAACAAGAATCTTACTGTGATCACACTGTACTtatatattatgcttttttataatgtttatatatattcaatttgaAAAAGAGGAGATGTGTGTTTAAAAGGAGCTGTCTTCAGAGTGGAACGGAGCTGGAAACGAGCACGGACCACGAGAAGCATGGTATTTAGCTTACCTGACAACAACCACACAAAACACCtctgtgtaaatacatttatacttgCTTTCTGCAATAAAACCCTCTAAATATGA

Function

NR:

description
PREDICTED: Kv channel-interacting protein 2-like

GO: NA

KEGG:

id description
K06268 PPP3R, CNB; serine/threonine-protein phosphatase 2B regulatory subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255219.1 True 1366 mRNA 0.43 8 2166620 2175433

Neighbor

gene id symbol gene type direction distance location
wu:fc17b08 LOC107705013,LOC107565911,LOC107699137,LOC107742810,LOC107753730,LOC107753729 coding upstream 72592 2076173 ~ 2094028 (+)
degs1 degs1,LOC107753721,LOC107699139,LOC107742811,LOC108412154 coding upstream 107054 2054989 ~ 2059566 (+)
fbxo28 fbxo28,LOC107753723,LOC107742812,LOC107701582,LOC107558225 coding upstream 120350 2039482 ~ 2046270 (+)
irf1a LOC107571076,LOC107725011,LOC107680285,LOC107565919 coding upstream 302262 1860931 ~ 1864358 (+)
foxg1d foxg1,LOC107709474,LOC107680282,LOC107565904,LOC108443822 coding upstream 348528 1815818 ~ 1818092 (+)
LOC122356458 NA coding downstream 10825 2186258 ~ 2195187 (+)
abcc2 abcc2,LOC107758572,LOC107582114,LOC107654078,LOC107558209 coding downstream 24551 2199984 ~ 2217020 (+)
LOC122356461 cox15,LOC107753717,LOC107582029,LOC108437854,LOC108260879,LOC102219127 coding downstream 42438 2217871 ~ 2224453 (+)
nrxn1b LOC107654084,LOC107582113,LOC107699145,LOC107758571,LOC107558206,LOC107738897 coding downstream 139073 2314506 ~ 2424731 (+)
LOC122356459 LOC107715620,LOC107654086,LOC107727476,LOC107571253 coding downstream 253327 2428760 ~ 2432683 (+)
G90094 NA non-coding upstream 90792 2075552 ~ 2075828 (+)
G90089 NA non-coding upstream 112774 2053597 ~ 2053846 (+)
G90088 NA non-coding upstream 114315 2052035 ~ 2052305 (+)
G90041 heatr5b non-coding upstream 130783 2035337 ~ 2035837 (+)
G90034 heatr5b non-coding upstream 132053 2017183 ~ 2034567 (+)
LOC122356498 pim3,LOC107732271 non-coding downstream 63509 2238942 ~ 2240047 (+)
G90206 NA non-coding downstream 110092 2285525 ~ 2286244 (+)
LOC122356495 NA non-coding downstream 128052 2303485 ~ 2304076 (+)
LOC122356488 NA non-coding downstream 134448 2309881 ~ 2311135 (+)
G90214 NA non-coding downstream 147176 2322609 ~ 2322964 (+)
tp53bp2a tp53bp2,LOC107582030,LOC107705014,LOC107558217,LOC107742808 other upstream 592 2153422 ~ 2166028 (+)
lgi1a lgi1a,lgi3,LOC107565913,LOC107701579,LOC107753733,LOC108260544 other upstream 169310 1989872 ~ 1997310 (+)
G90010 LOC107676803 other upstream 294029 1872184 ~ 1872591 (+)
mpc1 mpc1,LOC107693783,LOC107725004,LOC107565920,LOC107709408,LOC107571070 other upstream 324512 1840335 ~ 1842108 (+)
LOC122356486 march8,LOC107690179,LOC107582508,LOC107708446 other upstream 553290 1581358 ~ 1613330 (+)
cutc cutc other downstream 576 2176009 ~ 2180829 (+)
LOC122356772 pim3,LOC107732271 other downstream 89313 2264746 ~ 2284807 (+)
G90230 NA other downstream 294512 2469945 ~ 2470381 (+)
LOC122356072 znf318,LOC107739464,LOC107564219,LOC107728066 other downstream 807126 2982559 ~ 3010641 (+)
LOC122356070 dnph1 other downstream 876549 3051982 ~ 3278260 (+)

Expression


Co-expression Network