LOC122356506 (LOC107689349,LOC107663567,LOC107750141,LOC107720869,LOC107570923)


Basic Information

Item Value
gene id LOC122356506
gene name LOC107689349,LOC107663567,LOC107750141,LOC107720869,LOC107570923
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 21209818 ~ 21254638 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255250.1
CGTGAGGCTTGACGCGCGTCGCTAGAAGTTGCTTCATCCGACCTGTTGACAGCGGCACGCACGAGCGCACCGGGACCGAAGTTTCCTGCACTTTTGGATGCTAAGGTTAAAGAAGCAAATCTAAACTGGCGTGCAATGCAGGGTTGAGTTAaccgtgttttgtttttacgcatcatcatcatcatcatcatcatcatcctctccAGGTGCTTCTCTGACGACCGGGGGCCCCTGGTCCTTTGTGTCTGATCGTCCCTGAGATGACCGATCACTCGAGCCCGGATTGGCTGGAAGTGGCTCGCGATGAGAGCGCTGCTCGCGCTGTTGGCGGCGCTCGCGGCGGCGCGCGGCAGCAGGTACTGTCCCGAGCtgatgattgacagctgtcaCTGCACCGCGGAGAGATCAAAGGAGTTCAGCCGGCAGAGCGTGCGCGTGAAGGCTGTGTGCGACGACGCGGACCTGACGGAGACCATGCAGCCCAGCTCTTTACCCAACAAGACGGTGTCTCTGATCCTGAGCAACAATAAGATCTCTGCGCTGAAGAATAACTCTTTCCTCGGCCTGACAGCTCTGGAGAGACTGGATCTCAGCAGTAATCTCATCAGCAGAATTGCCCCCGGCGCGTTTCACGGCCTGAAGGCTTTGAGGAGACTGGATCTTTCCAGCAACAGGATTGGCTGTTTCTCTGCTGATATGTTTCTTGACCTTGGCCGTCTCTCCAAACTGAATCTGTCTGGGAATATCTTTTCCACGCTGCCGGAGGGTTTGTTCACACACGTCCCGTCTCTCAGAGCGCTGCAGGTGGGCACAGACTCTCTGTTCTGTGATTGTCAGCTGCGCTGGTTTCTGTCGTGGATCAGATCTCAGGCGGTGCGTGTCGGGAACGAATCCGTTTGTGTGTATCCGGCTCGCCTTCGTGGACTGGAGCTGCGCGGTCTTCAGGAGCAGCAGCTCACCTGCGACGGCCCTCTGGAGCTCCCCGTCCTGCAGCTCATCCCGACCCAGAGGCAGCTGGTGTTTCGCGGGGACCGTCTGCCGCTGCAGTGCACCGCCTCCTTCCTCGACCCGTCCGTCAGGCTGTCCTGGAGCCACGAGCAGCGTCCCGTCCAGACCCTGGAGGACAGAGGGCTGTACGTGGAGGACAGCATCGTTCACGACTGCTGCCTCGTCACCAGCGAGCTCATCCTGTCCAACATCGATGCCGGCGTTTCCGGTAATTGGCAGTGTCACGTGACCAGTTCCCGTGGCAACAGCTCAATCGGCATGGAGATCGTGGTGCTGGAGACGACGACGCTGTACTGCGGAGCCGAGAGGGTCAGTAGCAACAAGGGCGACTTCAGGTGGCCGAAGACGCTGGCCGGGTTCATGGCCTTCCTGCCGTGTGTCGCGTCCAGCTCTGGCTCCGCCCCTCTGGAGAAAAGGGCGTGGCGTAGGTGTGACCGCTCGGGCCGATGGGCGGAGCACGACTACAACCAGTGCTCTTACACCAGCCAGTTCACCCGCAGCCTGCACGAGCTCACGCAGGTGTCGGTGAACGTCTCCAGCGCTCTGGTTCTGGCGCAGCGGCTCTCGTCTCTCTCCAGCAGGGCGGCGCTGTTCGGGGACGTGATGGACGTCATCTTCGTCACTCATCTGGTGGAAAGACTCACGCGTCTGCTGGATCACGTCAGAGAGctggcCGATCACGTGCTGGACGTGGCTAGTAACATGATGGCGGTGGAGGAGCATGTTCTCTGGATGGCTCAGAACGAGGCTCGAGCCTGTACTCGGATCGTTCAGTGTGTGGAGCGTATCGCAGACCTCGCGCTCAACGCAAACACCACCGGCGTCTCAAAGGTCATCTTTTAACatctatttcatttttaaatcagaataaaCATTGCGCATGCATGCTGTCGCAATGTTGTTTACATCTCTTCATTTTCATCTGCTTTTGTTTCTAAGGATATTAGCAAGCATACTACACTTTACACAGGttagagaaaataaagaaatgaaacctagtacaaacacaaaagcacagatcctttcatatatatgtatatatttatatattagggGTGGTACGATACATGCATGAGGCCTTCAAACAAATACAGACAATCCAGAAGGGGGCCCTGAGCAGTGCAGCGCTGTTTGCTCACTTGAAAACAAAGTTCCCTAGACAGTGACCACACGCAGATTCTCAACTCTGATAATATCTATactctataatatatatataagtataaagtTGTACGTAAGATGTAATTTTATAACCGGCGTAATCTTGAATTCTTCTGTCATTTTTTGGAGAGacttgagaaagaaaaaaactgtccaAAGATGCACTTTATTGGATtctctttattttgttaatgtctatttcattttaagtaaGCCTTTTGATGTGGTTTTAATGGTAGCTGTAAGAACATGTGTTTCTCTCACAGAGCTGTTTGTGAATCTGTGATCTCTTCTTGTAGATCAGTGCATGTTCTTCATCTCAGGTGGCTTTTTTTGCGTCTAAACGGAGTGAATCTTGACGTAATGACAGACGTGTTGTTTTTCTGATAATGTAGGTTAAAGACCGGCTTCGTTAATGGACTCTTTGTTTagtctttttatgttttcataatcAGTCCTTGACTCACTCGACAGAATCCTGCtaaatgaatgctgtttatTCTCCAACGAGTGATGTGTGAGGGAAGTaattagagtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgggactatgtgtgtttctgtgtgtgtgtgtgtgtctgtgggactgtgtgtgtgtgtgtgtgtatgtgggactatgtgtg

Function

NR:

description
PREDICTED: adhesion G protein-coupled receptor A3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255250.1 True 2815 mRNA 0.52 11 21209818 21254638

Neighbor

gene id symbol gene type direction distance location
LOC122356507 LOC107708201,LOC107658777,LOC107554523 coding downstream 167664 21027765 ~ 21042154 (-)
LOC122356249 LOC107686530 coding downstream 212105 20955467 ~ 20997713 (-)
vox vox,LOC107750144,LOC107689360,LOC107580632 coding downstream 260120 20947987 ~ 20949698 (-)
vent NA coding downstream 263293 20944584 ~ 20946525 (-)
blnk LOC107750133,LOC107728331,LOC107689749,LOC107689365 coding downstream 522898 20662202 ~ 20686920 (-)
LOC122356942 LOC107689348,LOC107663569,LOC107750139,LOC108426858,LOC562831,LOC108262825,LOC107567011,LOC105926138 coding upstream 14712 21269350 ~ 21323003 (-)
trnag-gcc_70 NA coding upstream 159162 21413800 ~ 21413871 (-)
trnag-gcc_71 NA coding upstream 319613 21574251 ~ 21574321 (-)
valopa valopa,LOC107689369,LOC107688178,LOC107754013,LOC107745034 coding upstream 592792 21847430 ~ 21866898 (-)
LOC122356328 inpp5a,LOC107744939 coding upstream 653720 21908358 ~ 22024610 (-)
G95643 NA non-coding downstream 206167 21002627 ~ 21003651 (-)
G95642 NA non-coding downstream 207974 21001337 ~ 21001844 (-)
G95641 NA non-coding downstream 210553 20999040 ~ 20999265 (-)
G95640 NA non-coding downstream 213307 20996083 ~ 20996511 (-)
G95635 NA non-coding downstream 233321 20976279 ~ 20976497 (-)
G95715 NA non-coding upstream 232876 21487514 ~ 21495153 (-)
trnag-gcc_72 NA non-coding upstream 398974 21653612 ~ 21653681 (-)
G95899 NA non-coding upstream 619875 21874513 ~ 21874929 (-)
G95903 NA non-coding upstream 785144 22039782 ~ 22040106 (-)
G95902 NA non-coding upstream 860058 22114696 ~ 22120442 (-)
G95646 adgra1,LOC107750141,LOC107567015,LOC107663568,LOC106903219,LOC107720869 other downstream 29601 21007472 ~ 21180217 (-)
G95526 NA other downstream 638256 20570038 ~ 20571562 (-)
G95511 NA other downstream 712954 20493642 ~ 20496864 (-)
G95510 nid1,nid1a,LOC107691203,LOC107750138,LOC107728305,LOC107689759 other downstream 717742 20488785 ~ 20492076 (-)
G95520 NA other downstream 723114 20479925 ~ 20486704 (-)
LOC122357128 NA other upstream 882750 22137388 ~ 22143970 (-)
tmem254 LOC107689576,LOC107653189,LOC107742085,LOC107711410 other upstream 897104 22151742 ~ 22156859 (-)
klc1b klc4,LOC107742075,LOC108263390,LOC106963894 other upstream 976811 22231449 ~ 22250313 (-)
G95932 NA other upstream 981466 22236104 ~ 22238570 (-)
G95936 lbh other upstream 1041703 22296341 ~ 22297227 (-)

Expression


Co-expression Network