sos2 (LOC107654947,LOC107602966,LOC107736529,LOC107683816,LOC107553213)


Basic Information

Item Value
gene id sos2
gene name LOC107654947,LOC107602966,LOC107736529,LOC107683816,LOC107553213
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14209375 ~ 14224126 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255288.1
TTCCCTCCCTCCGGGCTGCGCAGATGCGGGAAGCGCGCGCAGTGAGCAGCTGTGATTACACCGTCATGGACACGAGCGCACCACATCGGAGCTGAATCGGGACGTTgccaacaacaaaaacaaagacattagCCCACCGAATTTTCGTCGGATCACAACGGATTCGGGCGTCGCTTTCGTGACTGGAATATGCCCGGCAGACGGACTCCAACAACATGACAGTGTCGCGCTGGAGAAGCTCCTGCTCCCGCGCTTCATGAAGAGTCTCGAGGCCACAGAGCCGCCGCGCCGCGCCGCCAGATGTGCTGCCGTTAACCGCGGGCACAACATCGCCAGACAAACACCAGCCTGACGACATTCAACGCTTGTTATTAACGCTTCCCCCTCTGTGAAAGACATGACATCGGCTGTCCTGTACGGGCGAGCTGCCCTACTAGCATGTGCGGCTAATTTCGGTGTATGTTAGCGGCTAATTAGCGCACGACGACCGCGACACTCCAACGGCTGTCAGGACAGAGACCCAGACGCTTTTTACACTCTGCTTAATTTGATTTACAAACACTTTTCCCCCCGCAGAATGAGGTGTTTCACGTGACGGAAAGCCTTGCTGGCCCGTAGATGTTGTAGagtttgagtttgttttgagtGTGCGTGCGCGCCGTGAGAGCGGCTAAACTTGAGTGGTTGTTCCCGGGGCTGGGAGCGCTCGGGGCCGATGCGGAGCAGCGCGGGCGGCGGCCGCAGGCATGCAGCACGACTTCGGCTCCAGCGAGGAGAACAGCGCGAGATGGCGAGGCCTGTTCGTGCAGGCGCTGCGAAAGGTGCAGTTACAAGTGCATCCAAACCTGTTGGCTAAAGAAGACGCACTCCAGCACATTGAGGCACTCATAATACAGCTCCTGAACAAGCTGTGTGTTACACAGCCCAGAACAATAGCTGATGTCGAGGATCGTGTCCAGAAGACGTTCCCGAATCCCATCGATAAATGGGCCACGGCGGATGCTCAGGGTGCGATAGAGAAGCGCAAGCGGAGGAACCCGCTTTTGCTCCCAGTCGATAAGATACATCCACTACTGAAGGAGGTACTGGGTTATAAGATCGACTATCATGTATGTCTGTATATTGTTGCTGTGCTGGAGTACATCTCAGCCGACATCCTTAAGCTGGCTGGAAACTACGTGAGCAACATTAGACATTACGAGATCAGCCAGCAAGACATCACTGTCTCCATGTGTGCTGACAAGGTTTTAATGGATATGTTCGATCAGGAAGAGGAGATGGGGCTTGTGTCTCAGAGTGTCGAGGAGGTTTCTTCCTCTGGTGTGCTCACATATGATGACCTTGTGCGCCTGGAGATTGCTGAGGAACGTCAGTATCTGCGGGAACTCGATCTTATCATCAAAGTATTCCGCCAAGCCTTTACGTCCGGTAGCAAACACTTCTCCACTCAGGACGTGGAGCTGGCATTCAGTAATATTCTCGAGGTTCACGAGTTAACAGTTAAGCTGTTGGGTCTTATTGAGGATGCTGTAGAAATGACAGCTGACGGTAGTCCACACCCTCTTGTGGGCAGCTGCTTCGAAGACCTCGCTGAGGAGCAGGCGTTTGATCCCTATGAGACACTCTCTCAAGACATCCTCTCTAAAGAATTCTGTCAACATTTCAACACTCTAATGTCCTGCCCAACTGTTGCTCTGTACTTCCAGTCAATTGCAGAGGGTTTTAAGGAGGCAGTGCAGTATGTGCTTCCTCAGTTGATGATGGTTCCCGTTTACCACTGCATGCACTACTTTGAACTGTTACAGCAATTGCAGGAGTGCAGTGAAGAGCAAGATGACAGAGAGTGTTTAAAACAGGCTCAAACTGCGCTGATCAACCTACAGTCCAGCATTGAACGCATATATACTAAACACCAACCACGGCGCAAACAAGGGGAGCCGCTGTATCGGTTATATAGTCGTGCATCTCGCAGCAAGCAGGCAGCAATAAAGCGCATGAATGACATCCAGAAGAGTATTGATGGCTGGGAGGGCAGAGATATCGGCCAGTGCTGCAGCCAGTTTATCATGGAAGGGGCGCTCCTACGGGCAGGAGCCAAGCACGAACGGCACAACTTCCTGTTCGACGGCCTCATGATAAGCTGCAAAGCCAACCAGAGCTCTAGGTTGCCAGGAGCGGGCAGTGGGGCGGAGTTTCGTCTGAAAGAGAAGTTTGTTTTACGCAAGTATCGCATTGTAGATCGTGAGGATTCACCAGAGTTTCGTCACGCATTCGAGCTGGTTGGCCGTGAGGAAAGCGGTGCGGTGTTCAGTGCACGTTCAGCAGAAGAGAAGAGTGCGTGGATGGCCGCGCTGGTCACGCTGCAGTACCGGCCCACTCTGGACCGCATGCTGGACACCGTCCTGCACCATGAGGAACAAGCACAACCGCTGAGGCTGCCGTCACCGGATATCTACCGGTTTGCCATACAGGATTCTGAGGAGAACATTGTATTTGAGGAGGGAGCTCAGCGCAAGACTGGAATCCCTATTATTAAGGCTGGGACCGTTGTCAAGCTTATTGAGAGACTGACGTACCACATGTATGCAGACCCAAATTTTGTGCGTACGTTTTTGACTACGTACCGTTCTTTTTGTAAACCACAAGAGCTGATCCAACTACTGATTGAAAGGATTGAGATTCCAGAGCCAGAGCCATCGGAAGCAGACCGAGAGGCACTTTGGAATGGAGAGCAACCAATGGTAGCAGAGCTTCAGAGATTTCGCAGAGAATACGTACAGCCTGTCCAACTCAgGGTTCTGAATGTATTCCGTCAGTGGGTAGAACATCACTTTTATGACTTTGAGAATGATCCTGAGCTCAGCTGTGAACTTGAAGAATACCTCACCAGCACCACACAACTTAGAGGTAAATCGATGCGCAAGTGGGTGGAGTCTATCATCAAGATCATGAGgaggaagaaacaaactcaatcTAATGGCATCAGTCACAACATCACCTTTGAGAGCCCACCTCCTCCTATTGAATGGCACATCAGCCGTCCCGGAAGCATTGACACCTTTGACCTTATGACCCTTCATCCAATAGAAATTGCTCGTCAGTTAACGCTTCTAGAGTCTGATCTGTACAGAGCCGTTCGTCCATCTGAGCTGGTAGGAAGCGTTTGGACAAAAGAAGATAAAGAGAAGAACTCTCCAAATCTGCTGAGGATGATTAGACACACAACCAACCTCACACTGTGGTTTGAAAAGTGTATAGTAGAGGCTGAAAATGTGGACGAGAGGGTTGCTGTGTTCTCTCGTATTATTGAGATCCTGCAGGTGTTTCAAGAGCTCAATAACTTCAATGGAGTTTTGGAGATTGTAAGCGCCATCAATTCAGTACCGGTGTATCGCCTCGACCACACATTTGAGGCCGTGcctgagaggaagaggaggattcTAGAGGAAGCTGTTGAACTTAGTCAGGATCATTTTAAGAAATACCTCGCCAAGCTCAAATCCATTAACCCGCCTTGTGTACCTTTTTTTGGCATCTACTTGACTAACATTCTCAAGACTGAAGAGGGAAATCCAGATTTTTTGAAACGTGATGGAAAAGAACTGATCAACTTTAGCAAAAGACGCAAAGTAGCAGAAATCACTGGAGAAATCCAGCAGTACCAGAACCAACCTTACTGCCTCAAAGTAGAACACGATATTAAGagATTTTTTGAGAATCTGAATCCAATGGGAAACATGAGCGAGAAGGACTTTTCTGACTACCTGTTCAACAAGTCTCTAGAGATTGAACCACGGAACTGTAAACAGCCACCCAGATTtCCCAGAAAGACTACGTATTCTCTGAAGTCTCCAGGCGTTCGGCCGGTGCGGCAGGCATCAGGAGGAGGAGGGACTCTGAAAGGTCACCCAGTGCCATTAGAACGAGAACCACCTCACAAAATCACCTTCAGGAGCATCGCAGAAACAGAACCTGAGACTCCCCCATCTCTCCCCACCTCTCCAAACACACCCACACCTCCACAGTCTGCCAGCTCTGACCTCAACTCGGTGTTCATTGAGCCTGACCTGAGCAGCTCTTATGgTAACAACACCATATTTGCCCCAGTTTTGCTGCCTCAGTCCAagtCTCAGTCTGTGTCATGTGGCAGTTTGCACCATTTGATTGGCGATGAGCTACTTAAACCCCCTCCATTACCTCCCCGCAGGAAAGATACCGCTTCAGAGACCAAGTTGAGTTCCAGGCCTGAAAGTCCTCCCGCCATTCCACCACGacagcctcctcctcctcgcctGCAACCACGTGTCCCAGTGATCAACGGGCCAACAGATGGGCCGCTGCCAAGCCCCCGGCCCCCTCCGCCCCGCGATCCTCTGCCAGACACACCTCCGCCAGTTCCACAGCGACCTCCGGAGATCTTCATCAACTATCCGGTGAACATGCAGCCGTCTCCAGGAGGCCGTTTCCACTGGGACTTCACCAGCTCGCCCAGCACTCCCAACACCCCTCCTGGCACGCCCTCGCCCCGGGTCCGGCCCCCCGGCACACCTTCTCCACGTGTGCCTCGCCGCCCCTGCACGCCCAGCATCAGTCAACCCAGCCTGGTGCACCTGCCCCCGCCCACTCCGGCCCCTCCCATACCACCTCGGCACAACTCCACCCCCGCGCTGCCAAAACTGCCCCCCAAGACTTACAAGAGAGAACTTTCTcaatccacacacactctctcgcagCCATCcatacacactctctcgctAGTCGACAACAGGGACAACAACGAATAAGAGCATCCCACCCTAAAATACAGACGTGAGTGTGCgagtgtatgtgtgcgtgttttaACGTTTAACCTGGAAGCAGACAATCTGATGCTAATGAAAACCTGAGGATGCTTGAGGAATGTGGTTATCACTCATTTTTCACATCCGTGCAGAGCTACGCAAGGTCATGTGCTCGTCGACAGCACATTCACTAATGGAAATGCTGCTCCGAGGCCTTTCACCACCGTCAGACTATGCTGTGGATGTTTATTTGGTtgcaggtcagaggtcaaccAGGGTTCAACCCGAACACCCTAAGCACGCCTCTCTTTGGTTGCCTTTAACTCACAGCCGTGACCTTGACCAGAGATTGTACCCATCAGGTGAACTCTTTAACATTTTGATGAGAGCTTTTTCCTTACACTATTTAAAGCCAATATGATGTCTTAACCCCTCCCCTTGAAGGCGTACTCATCTATTCGTTGATTCGTCACAAACCGATACTTACGCCCCTTGATTTCCGCACCAGACTCTTAATGTGCCTTCAATATCAGTACTGAACAAAATGTAAGCATTCGCCTTGACCATGCGTAGAAGAAATGTCTAGACAACACCTCCGATCGTCCATTTGTGCGTGTGCGCTCCAAGTATTCTGTACAAAGTGACATATCTGCCCTCACTACTCACCTCGGCGCCATGGCAGCCCAGTTGCTGATGTATCTACTGACAATCTTAGTCTGAGACCCACCGGATTCACACACTGTTGTAGAGTGTTTGGTGTGGACCAGTGTCAAGTTTGTGTGTCTTAATAGTGTGCGGtgagcctttttttttgcactttaggGCAGTACTGTTACAGAGAAGCAGAGGACTCAAACTCACAATCCTGTGACCTTATGACCCTGTCCTGCTAACCCCCGTCCTCTGGGCTGGTCAGGACATCCATCGGGCCGTTTCCCAAAACTCGTGACGTTTGGGACGCGGTCAGAATGTTCTATTGTAAATCACGCCTCCTGCTCTCATTCAGGTCCGCTCCATCAACCGAGCCAGGTCCGTACAGGAAGGGCTTCATCACCAGAGCAATTCCTATCCAATCGACCACGGAAATGGTCTCCGAGGTCATCAGCCATAGAGGGACTGCAGTGTTTTGTagtgatgtcacatcctgtacGTGTAGAATCTCACTCCCACTGAGATGATTGGTCAATTTGGTTTGAAGTGTTAGTAATTCCCAAAaactcactctgtgtgtgtgtctgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgtgcgtgtgagcatTTAAGGCCTGTAACTGCTTTTGTACCATGTTCTCCATGAGACTCATTAATAAACTCGCAGTCTTATTTTCTAC

Function

NR:

description
PREDICTED: son of sevenless homolog 2

GO: NA

KEGG:

id description
K03099 SOS; son of sevenless

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255288.1 True 6143 mRNA 0.51 23 14209375 14224126

Neighbor

gene id symbol gene type direction distance location
cdkn3 cdkn3 coding downstream 8596 14192514 ~ 14200779 (-)
lgals3a lgals3a,LOC107736502,LOC107683071,LOC107705436,LOC107602963,LOC107553209,LOC107654953 coding downstream 24882 14178150 ~ 14184493 (-)
LOC122356234 synj2bp,LOC107705435,LOC107654920,LOC107736856,LOC107553210,LOC107580248 coding downstream 32501 14172637 ~ 14176874 (-)
LOC122356233 LOC107705434,LOC794838,LOC107553207,LOC107683381,LOC107654921,LOC107602927 coding downstream 37520 14164734 ~ 14171855 (-)
pacs2 pacs2,LOC107654955,LOC107681285 coding downstream 50209 14129394 ~ 14159166 (-)
l2hgdh l2hgdh,LOC107682613,LOC107736610,LOC107705441,LOC107654945 coding upstream 3072 14227198 ~ 14232322 (-)
cdkl1 cdkl1,LOC107705442,LOC107736652,LOC107553215,LOC107602970,LOC107683176,LOC105890986 coding upstream 11974 14236100 ~ 14243270 (-)
map4k5 map4k5,LOC107602968,LOC107705444,LOC107736580 coding upstream 19276 14243402 ~ 14267479 (-)
sav1 sav1,LOC107705447,LOC107654943,LOC107736858,LOC107602931,LOC107682971,LOC107553191 coding upstream 53270 14277396 ~ 14285372 (-)
nin LOC107602976,LOC107654941,LOC107705448,LOC107736676 coding upstream 61643 14285769 ~ 14305538 (-)
G93905 NA non-coding downstream 19471 14187539 ~ 14189904 (-)
G93879 NA non-coding downstream 279081 13761046 ~ 13930294 (-)
G93855 NA non-coding downstream 520749 13685947 ~ 13688626 (-)
G93591 LOC107705361,LOC107654976,LOC107602941 non-coding downstream 543115 13665809 ~ 13666260 (-)
G93588 LOC107654976,LOC107553194,LOC107602941 non-coding downstream 545464 13661750 ~ 13663911 (-)
G94003 NA non-coding upstream 648306 14872432 ~ 14873014 (-)
G94016 NA non-coding upstream 756870 14980996 ~ 14995700 (-)
G94063 NA non-coding upstream 1055281 15279407 ~ 15284055 (-)
G94132 NA non-coding upstream 1380561 15604687 ~ 15605713 (-)
G94145 NA non-coding upstream 1416149 15640275 ~ 15640633 (-)
srsf5a srsf5,srsf5a,LOC107683426,LOC107602962,LOC107654954,LOC108411053 other downstream 44961 14160323 ~ 14164414 (-)
LOC122356235 LOC107705430,LOC107683441,LOC107553204,LOC107602960,LOC107654922 other downstream 126585 14079532 ~ 14082790 (-)
G93875 LOC107680680,LOC107739875,LOC107576479,LOC107553198,LOC107705377,LOC107654967 other downstream 297538 13910339 ~ 13911837 (-)
LOC122356386 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 other downstream 304673 13898258 ~ 13904702 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other downstream 491061 13693026 ~ 13718314 (-)
lmbrd1 lmbrd1,LOC107747273,LOC107736841,LOC107664263 other upstream 800706 15024832 ~ 15099233 (-)
col9a1b col9a1b,LOC107736853,LOC107664283,LOC107747286,LOC107665560,LOC107747272,LOC107736861,LOC108429279,LOC107564679 other upstream 1003206 15227332 ~ 15253357 (-)
G94128 NA other upstream 1340491 15564617 ~ 15583917 (-)
G94147 NA other upstream 1417905 15642031 ~ 15642503 (-)
zgc:123010 LOC107601052,LOC107747265,LOC107719217,LOC107665557,LOC107702739 other upstream 1462144 15686270 ~ 15720816 (-)

Expression


Co-expression Network