esr2b (LOC107736782,LOC107683586)


Basic Information

Item Value
gene id esr2b
gene name LOC107736782,LOC107683586
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14377594 ~ 14393187 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255316.1
GCCAAAGTACAATAAGACATAGCGCTCTAGGACACTACCAGGTGTTCGCATGTCTCTCACTTTTTCTCTCTTGCGTCTGTTGCTAACTTcagtgctctttttttttctctttgcgAGCGCAGTTGCCTAAATCCGGTCGATAGGCTGCGCAGCGCGTTCACGGCTGATCAAACAGGTCTCTGCTCTCCGGCTCACATCACCTGCTGCCTGCCTGCTATCGCAAGCACTTCCTCTGACACTGTTGGGCCTACAATGCAGTAGTCTGTCAAGCCAGGACCTCGCTTGAATTCTCCAGAATGAGCTCCTCCCCTGGTCCGGCCCCTGCTTCAGCCACCCCTGCCCTGGACTCCGGGAAGGCCAGTCGAGGGGACTCGCCTAACACCTTACCCCATCTGTACACGTCCCAGCTCGGCATGGACAGCCAAACCATCTGCATTCCATCTCCGTATGTGGAAGCCTGTCAGGATTATTCACCACCGCATGGGGGAGAGATCAGCCACGGAGCCTTAACGCTCTACAGCCCCGTGTCCTCCACAGTGCTGGGGTACACTCATCCCCCCGTGTCCGAAAGCCTGGTCCCTTTAAGTTCGACAATCTTCTGGCCTCCCCACACCGCACTGGTCTACAGcgaaacacacgcacacaccacCTGGGAGGACGCCAAAACACACACCATTAACCAGGGCAGTCCTGTCCTTACTCATGCAAAGCTGGTAGGGCAGCAACCGGATGGTGATGAAGGCTTGAATCCTTCACCAGGCATTTTGAGTAAAGGAGACACACACTTCTGTGCAGTGTGTCATGACTACGCCTCTGGGTATCACTATGGTGTCTGGTCTTGTGAGGGGTGCAAGGCTTTTTTCAAACGCAGCATTCAAGGGCATAATGACTATATTTGTCCAGCTACCAATCAGTGCACCATTGACAAAAGCCGACGCAAGAGCTGCCAGGCCTGTCGACTCCGCAAGTGCTATGAAGTGGGCATGATGAAGTGTGgTGTGAGGCGGGAACGCTGTAGTTACCGAGGTGCCCGTCATCGACGTAACTCCCAGAGCCGAGACATCTCAGGCGGGGCTTTAGGGGTCAGAGTTCGTTCCCGGCCTCATTTAGAATTTCCCCTCAGTCCCACTCATCCACTCTTCCCTTCAGGGGACAGAGCTGAGGGATGTGGCCGGAGCCTCTCTCCAGAGCAGTTGGTCAATTGTATTTTGGAGGCGGAGCCTCCTCAGATTTACCTGAGAGAGCCAATAAAGAAGCCATACACGGAGGCCAGCATGATGATGTCACTAACCAACCTCGCTGACAAGGAACTGGTGCTCATGATCAGCTGGGCGAAGAAGATACCAGGTTTTGTGGAGCTGACTTTGTCTGATCAGGTGCATCTGTTGGAATGCTGCTGGCTGGATATATTGATGTTGGGACTGATGTGGAGATCCGTGGATCATCCCGGGAAGCTCATCTTCTCACCTGACCTCAAACTCAACAGGGAAGAAGGCAACTGTGTTGAAGGCTTCATGGAGATCCTTGACATGCTGCTGGCCACCACCTCCAGATTCAGAGAGCTGAAGCTTCAGAGAGAGGAATACGTCTGTCTCAAAGCCATGATCCTTCTCAACTCCAATAACTGTTCAAGCTTGTCACAGACTCCTGAAGATGTAGAGAGCCGTGGGAAGGTTCTGAGGCTGCTGGACTCTGTGACTGACGCTCTAGTTTGGACCATCTCAAGAACAAGCTTGTCTTCGCAGCAGCAATCCATCCGTCTCGCTCATCTGCTAATGCTGCTCTCACATATTCGACACCTCAGCAACAAAGGCATTGAGCATCTGTCAACCATGAAGAGAAAAAACGTGGTGCTGCTGTATGATCTTCTGCTAGAGATGCTGGATGCCAACACATCCCAGAGCAGCCGGATGCTGGCGGCTCACACGGAAGCCTCTCTCCGGTCGGACACACAGACCACAGACCACCCATCCAGACAGTCTGCACTGAAAGAGAGCAACCTGGAGACCTGGGACAGTACACAAGCTGAAGAGACAGTTGATAAGACATTACATTGTAGCATGCATCGAGTGGGGATGGACACAGACTGACAGTATCCCTTCTGTGGTGTAAAAATCTCCCTGGATGCAGCAATGGATATGAATCCAATATCTGAGCCACTTATCGTCCAATGTTGGGTCGAGGGGGTTCAAACCAGAGCTGGAAAAAAACTTGACCAACGACAACCTGAACCAAACAGGGCTTTCAACTGGCTCTCAGTCTTGCTCTAACACAATGCAGTTTGAACTGTTGCTTTCCTATTATGCCGTAATGTCAACCTGAAGAGGAATACATCTTATTCAAACCAATCGCATTTTCAGCATTCACAAATGGAATCCTTTTAATGGCTGGTTCCATTAAATATAAAGCGTGTAATTTCTGTGCTAAACACAGTAGCAAGAAACTGTTTAAACACTCCCCCATCTGTCATTATTCAGCAACCAGCTAGCACCACCCCTAAATCATGCCATTGGTTGATCAAGAGCTATGTTGTGTTCTTTTGAGCCATTCAAACAGATTGGCGAAATTACACactgcacatttaaatatttggtttGCCATCCAAGATGACAGAGAACCTCTGACTTGAACCTGACTGTTTCTCTGAAGACCGGCCAATATAAATGAAACGCacacttttaatagtttatgcATTTTGTACTCTGCGTCTGTGCATTTGTAAGACATTGGAGTGCTGTTGTTTGCGGCTCTGTGTTGCTTCTCGTGGTTCATAAAGTACTTGTCACTGGCAGTAAATAtaacgcttttaaaaata
>XM_043255317.1
GCCAAAGTACAATAAGACATAGCGCTCTAGGACACTACCAGGTGTTCGCATGTCTCTCACTTTTTCTCTCTTGCGTCTGTTGCTAACTTcagtgctctttttttttctctttgcgAGCGCAGTTGCCTAAATCCGGTCGATAGGCTGCGCAGCGCGTTCACGGCTGATCAAACAGGTCTCTGCTCTCCGGCTCACATCACCTGCTGCCTGCCTGCTATCGGCACGTTTTCAAAGAAATTTTGTAAAGCAAGCACTTCCTCTGACACTGTTGGGCCTACAATGCAGTAGTCTGTCAAGCCAGGACCTCGCTTGAATTCTCCAGAATGAGCTCCTCCCCTGGTCCGGCCCCTGCTTCAGCCACCCCTGCCCTGGACTCCGGGAAGGCCAGTCGAGGGGACTCGCCTAACACCTTACCCCATCTGTACACGTCCCAGCTCGGCATGGACAGCCAAACCATCTGCATTCCATCTCCGTATGTGGAAGCCTGTCAGGATTATTCACCACCGCATGGGGGAGAGATCAGCCACGGAGCCTTAACGCTCTACAGCCCCGTGTCCTCCACAGTGCTGGGGTACACTCATCCCCCCGTGTCCGAAAGCCTGGTCCCTTTAAGTTCGACAATCTTCTGGCCTCCCCACACCGCACTGGTCTACAGcgaaacacacgcacacaccacCTGGGAGGACGCCAAAACACACACCATTAACCAGGGCAGTCCTGTCCTTACTCATGCAAAGCTGGTAGGGCAGCAACCGGATGGTGATGAAGGCTTGAATCCTTCACCAGGCATTTTGAGTAAAGGAGACACACACTTCTGTGCAGTGTGTCATGACTACGCCTCTGGGTATCACTATGGTGTCTGGTCTTGTGAGGGGTGCAAGGCTTTTTTCAAACGCAGCATTCAAGGGCATAATGACTATATTTGTCCAGCTACCAATCAGTGCACCATTGACAAAAGCCGACGCAAGAGCTGCCAGGCCTGTCGACTCCGCAAGTGCTATGAAGTGGGCATGATGAAGTGTGgTGTGAGGCGGGAACGCTGTAGTTACCGAGGTGCCCGTCATCGACGTAACTCCCAGAGCCGAGACATCTCAGGCGGGGCTTTAGGGGTCAGAGTTCGTTCCCGGCCTCATTTAGAATTTCCCCTCAGTCCCACTCATCCACTCTTCCCTTCAGGGGACAGAGCTGAGGGATGTGGCCGGAGCCTCTCTCCAGAGCAGTTGGTCAATTGTATTTTGGAGGCGGAGCCTCCTCAGATTTACCTGAGAGAGCCAATAAAGAAGCCATACACGGAGGCCAGCATGATGATGTCACTAACCAACCTCGCTGACAAGGAACTGGTGCTCATGATCAGCTGGGCGAAGAAGATACCAGGTTTTGTGGAGCTGACTTTGTCTGATCAGGTGCATCTGTTGGAATGCTGCTGGCTGGATATATTGATGTTGGGACTGATGTGGAGATCCGTGGATCATCCCGGGAAGCTCATCTTCTCACCTGACCTCAAACTCAACAGGGAAGAAGGCAACTGTGTTGAAGGCTTCATGGAGATCCTTGACATGCTGCTGGCCACCACCTCCAGATTCAGAGAGCTGAAGCTTCAGAGAGAGGAATACGTCTGTCTCAAAGCCATGATCCTTCTCAACTCCAATAACTGTTCAAGCTTGTCACAGACTCCTGAAGATGTAGAGAGCCGTGGGAAGGTTCTGAGGCTGCTGGACTCTGTGACTGACGCTCTAGTTTGGACCATCTCAAGAACAAGCTTGTCTTCGCAGCAGCAATCCATCCGTCTCGCTCATCTGCTAATGCTGCTCTCACATATTCGACACCTCAGCAACAAAGGCATTGAGCATCTGTCAACCATGAAGAGAAAAAACGTGGTGCTGCTGTATGATCTTCTGCTAGAGATGCTGGATGCCAACACATCCCAGAGCAGCCGGATGCTGGCGGCTCACACGGAAGCCTCTCTCCGGTCGGACACACAGACCACAGACCACCCATCCAGACAGTCTGCACTGAAAGAGAGCAACCTGGAGACCTGGGACAGTACACAAGCTGAAGAGACAGTTGATAAGACATTACATTGTAGCATGCATCGAGTGGGGATGGACACAGACTGACAGTATCCCTTCTGTGGTGTAAAAATCTCCCTGGATGCAGCAATGGATATGAATCCAATATCTGAGCCACTTATCGTCCAATGTTGGGTCGAGGGGGTTCAAACCAGAGCTGGAAAAAAACTTGACCAACGACAACCTGAACCAAACAGGGCTTTCAACTGGCTCTCAGTCTTGCTCTAACACAATGCAGTTTGAACTGTTGCTTTCCTATTATGCCGTAATGTCAACCTGAAGAGGAATACATCTTATTCAAACCAATCGCATTTTCAGCATTCACAAATGGAATCCTTTTAATGGCTGGTTCCATTAAATATAAAGCGTGTAATTTCTGTGCTAAACACAGTAGCAAGAAACTGTTTAAACACTCCCCCATCTGTCATTATTCAGCAACCAGCTAGCACCACCCCTAAATCATGCCATTGGTTGATCAAGAGCTATGTTGTGTTCTTTTGAGCCATTCAAACAGATTGGCGAAATTACACactgcacatttaaatatttggtttGCCATCCAAGATGACAGAGAACCTCTGACTTGAACCTGACTGTTTCTCTGAAGACCGGCCAATATAAATGAAACGCacacttttaatagtttatgcATTTTGTACTCTGCGTCTGTGCATTTGTAAGACATTGGAGTGCTGTTGTTTGCGGCTCTGTGTTGCTTCTCGTGGTTCATAAAGTACTTGTCACTGGCAGTAAATAtaacgcttttaaaaata
>XM_043255318.1
GCCAAAGTACAATAAGACATAGCGCTCTAGGACACTACCAGGTGTTCGCATGTCTCTCACTTTTTCTCTCTTGCGTCTGTTGCTAACTTcagtgctctttttttttctctttgcgAGCGCAGTTGCCTAAATCCGGTCGATAGGCTGCGCAGCGCGTTCACGGCTGATCAAACAGGTCTCTGCTCTCCGGCTCACATCACCTGCTGCCTGCCTGCTATCGCAAGCACTTCCTCTGACACTGTTGGGCCTACAATGCAGTAGTCTGTCAAGCCAGGACCTCGCTTGAATTCTCCAGAATGAGCTCCTCCCCTGGTCCGGCCCCTGCTTCAGCCACCCCTGCCCTGGACTCCGGGAAGGCCAGTCGAGGGGACTCGCCTAACACCTTACCCCATCTGTACACGTCCCAGCTCGGCATGGACAGCCAAACCATCTGCATTCCATCTCCGTATGTGGAAGCCTGTCAGGATTATTCACCACCGCATGGGGGAGAGATCAGCCACGGAGCCTTAACGCTCTACAGCCCCGTGTCCTCCACAGTGCTGGGGTACACTCATCCCCCCGTGTCCGAAAGCCTGGTCCCTTTAAGTTCGACAATCTTCTGGCCTCCCCACACCGCACTGGTCTACAGcgaaacacacgcacacaccacCTGGGAGGACGCCAAAACACACACCATTAACCAGGGCAGTCCTGTCCTTACTCATGCAAAGCTGGTAGGGCAGCAACCGGATGGTGATGAAGGCTTGAATCCTTCACCAGGCATTTTGAGTAAAGGAGACACACACTTCTGTGCAGTGTGTCATGACTACGCCTCTGGGTATCACTATGGTGTCTGGTCTTGTGAGGGGTGCAAGGCTTTTTTCAAACGCAGCATTCAAGGGCATAATGACTATATTTGTCCAGCTACCAATCAGTGCACCATTGACAAAAGCCGACGCAAGAGCTGCCAGGCCTGTCGACTCCGCAAGTGCTATGAAGTGGGCATGATGAAGTGTGgTGTGAGGCGGGAACGCTGTAGTTACCGAGGTGCCCGTCATCGACGTAACTCCCAGAGCCGAGACATCTCAGGCGGGGCTTTAGGGGTCAGAGTTCGTTCCCGGCCTCATTTAGAATTTCCCCTCAGTCCCACTCATCCACTCTTCCCTTCAGGGGACAGAGCTGAGGGATGTGGCCGGAGCCTCTCTCCAGAGCAGTTGGTCAATTGTATTTTGGAGGCGGAGCCTCCTCAGATTTACCTGAGAGAGCCAATAAAGAAGCCATACACGGAGGCCAGCATGATGATGTCACTAACCAACCTCGCTGACAAGGAACTGGTGCTCATGATCAGCTGGGCGAAGAAGATACCAGGTTTTGTGGAGCTGACTTTGTCTGATCAGGTGCATCTGTTGGAATGCTGCTGGCTGGATATATTGATGTTGGGACTGATGTGGAGATCCGTGGATCATCCCGGGAAGCTCATCTTCTCACCTGACCTCAAACTCAACAGGGAAGAAGGCAACTGTGTTGAAGGCTTCATGGAGATCCTTGACATGCTGCTGGCCACCACCTCCAGATTCAGAGAGCTGAAGCTTCAGAGAGAGGAATACGTCTGTCTCAAAGCCATGATCCTTCTCAACTCCAATAACTGTTCAAGCTTGTCACAGACTCCTGAAGATGTAGAGAGCCGTGGGAAGGTTCTGAGGCTGCTGGACTCTGTGACTGACGCTCTAGTTTGGACCATCTCAAGAACAAGCTTGTCTTCGCAGCAGCAATCCATCCGTCTCGCTCATCTGCTAATGCTGCTCTCACATATTCGACACCTCAGCAACAAAGGCATTGAGCATCTGTCAACCATGAAGAGAAAAAACGTGGTGCTGCTGTATGATCTTCTGCTAGAGATGCTGGATGCCAACACATCCCAGAGCAGCCGGATGCTGGCGGCTCACACGGAAGCCTCTCTCCGGTCGGACACACAGACCACAGACCACCCATCCAGACAGTCTGCACTGAAAGAGAGCAACCTGGAGACCTGGGACAGTACACAGTGAGTGTATATAAGCTGAAGAGACAGTTGATAAGACATTACATTGTAGCATGCATCGAGTGGGGATGGACACAGACTGACAGTATCCCTTCTGTGGTGTAAAAATCTCCCTGGATGCAGCAATGGATATGAATCCAATATCTGAGCCACTTATCGTCCAATGTTGGGTCGAGGGGGTTCAAACCAGAGCTGGAAAAAAACTTGACCAACGACAACCTGAACCAAACAGGGCTTTCAACTGGCTCTCAGTCTTGCTCTAACACAATGCAGTTTGAACTGTTGCTTTCCTATTATGCCGTAATGTCAACCTGAAGAGGAATACATCTTATTCAAACCAATCGCATTTTCAGCATTCACAAATGGAATCCTTTTAATGGCTGGTTCCATTAAATATAAAGCGTGTAATTTCTGTGCTAAACACAGTAGCAAGAAACTGTTTAAACACTCCCCCATCTGTCATTATTCAGCAACCAGCTAGCACCACCCCTAAATCATGCCATTGGTTGATCAAGAGCTATGTTGTGTTCTTTTGAGCCATTCAAACAGATTGGCGAAATTACACactgcacatttaaatatttggtttGCCATCCAAGATGACAGAGAACCTCTGACTTGAACCTGACTGTTTCTCTGAAGACCGGCCAATATAAATGAAACGCacacttttaatagtttatgcATTTTGTACTCTGCGTCTGTGCATTTGTAAGACATTGGAGTGCTGTTGTTTGCGGCTCTGTGTTGCTTCTCGTGGTTCATAAAGTACTTGTCACTGGCAGTAAATAtaacgcttttaaaaata

Function

NR:

description
PREDICTED: estrogen receptor beta isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0043401 steroid hormone mediated signaling pathway biological_process
GO:0030520 intracellular estrogen receptor signaling pathway biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0005496 steroid binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0008270 zinc ion binding molecular_function
GO:0030284 estrogen receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255316.1 False 2815 mRNA 0.50 10 14377594 14393187
XM_043255317.1 True 2842 mRNA 0.50 11 14377594 14393187
XM_043255318.1 False 2828 mRNA 0.50 10 14377594 14393187

Neighbor

gene id symbol gene type direction distance location
tmx1 tmx1,LOC107654918,LOC107602932,LOC107736746,LOC107683560,LOC107705366 coding upstream 32733 14339891 ~ 14344861 (+)
atl1 atl1,LOC107705445,LOC107602974,LOC107736665,LOC107682422,LOC107553217 coding upstream 101155 14268377 ~ 14276439 (+)
dmac2l atp5s,LOC107705443,LOC107602971,LOC107654946,LOC107736634,LOC107553216 coding upstream 141561 14232374 ~ 14236033 (+)
LOC122356518 LOC107705440,LOC107654948,LOC107736540,LOC107682154,LOC100538248 coding upstream 168209 14200850 ~ 14209385 (+)
cnih1 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding upstream 181342 14191182 ~ 14196252 (+)
gphb5 gphb5,LOC104954562 coding downstream 91879 14485066 ~ 14487500 (+)
phf3 LOC107665590,LOC107726593,LOC107602981,LOC107736851,LOC107683665,LOC107553234 coding downstream 226978 14620165 ~ 14630849 (+)
zgc:171579 zgc:171579,LOC107665586,LOC107568696,LOC107736860,LOC107747305,LOC107579559,LOC107664312 coding downstream 446595 14839782 ~ 14842432 (+)
adgrb3 adgrb3,LOC107664175,LOC107665593,LOC107736840,LOC107747274 coding downstream 480728 14873915 ~ 15011010 (+)
zgc:172136 LOC107665601,LOC107601056,LOC107747271,LOC107664217,LOC107736845 coding downstream 885173 15278360 ~ 15295194 (+)
G93766 LOC107705365,LOC107736713,LOC107553220,LOC107683494,LOC107602921 non-coding upstream 55510 14318780 ~ 14322084 (+)
G93755 NA non-coding upstream 69212 14306996 ~ 14308382 (+)
G93745 sav1,LOC107705447,LOC107654943,LOC107736858,LOC107602931,LOC107682971,LOC107553191 non-coding upstream 92817 14282769 ~ 14284777 (+)
G93743 NA non-coding upstream 100719 14276615 ~ 14276875 (+)
G93736 NA non-coding upstream 128072 14248765 ~ 14249522 (+)
G93818 NA non-coding downstream 138835 14532022 ~ 14532317 (+)
G93834 sgpp1,LOC107602978,LOC107726595,LOC107553224,LOC107683631 non-coding downstream 170204 14563391 ~ 14567101 (+)
G93835 NA non-coding downstream 175138 14568325 ~ 14568913 (+)
G93836 NA non-coding downstream 175968 14569155 ~ 14569697 (+)
G93839 sgpp1,LOC107726595,LOC107602978,LOC107683631 non-coding downstream 182193 14575380 ~ 14576330 (+)
frmd6 frmd6,LOC107654939,LOC107683538,LOC107736757,LOC107726597 other upstream 8037 14354115 ~ 14369557 (+)
gmfb gmfb,LOC107705437,LOC107553212,LOC107602964,LOC102779377 other upstream 188601 14185315 ~ 14188993 (+)
G93613 NA other upstream 467991 13739607 ~ 13909603 (+)
LOC122356417 mfsd2aa,LOC107654966,LOC107705421,LOC107602949,LOC107739898 other upstream 616860 13749135 ~ 13760734 (+)
tasp1 tasp1,LOC107705405,LOC107654993,LOC107600565,LOC107662811,LOC107585512,LOC107739887 other upstream 1219154 13134473 ~ 13158440 (+)
LOC122357077 zgc:153049,LOC107747287,LOC107736842,LOC107665562,LOC107664273,LOC107573610,LOC107553186 other downstream 713271 15106458 ~ 15226722 (+)
fam135a LOC107747270,LOC107665594,LOC107736843,LOC107664195,LOC107564672 other downstream 861887 15255074 ~ 15275234 (+)
tarbp1 tarbp1,si:dkey-85a20.4,LOC107736847,LOC107564676,LOC107683215 other downstream 902662 15295849 ~ 15314656 (+)
LOC122356934 LOC107747267,LOC107665602,LOC107601027 other downstream 921627 15314814 ~ 15318177 (+)
hps1 hps1,LOC107747297,LOC107665607,LOC107719211,LOC107702747,LOC107586068 other downstream 1471652 15864839 ~ 15871816 (+)

Expression


Co-expression Network