ccnj (ccnj,LOC107689370,LOC107565073,LOC107728310,LOC107750147,LOC107689765,LOC107750154)


Basic Information

Item Value
gene id ccnj
gene name ccnj,LOC107689370,LOC107565073,LOC107728310,LOC107750147,LOC107689765,LOC107750154
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 20645694 ~ 20651555 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255381.1
GATTGGCCGAGGCCGTGGACGGGCTCGCCGTGCCGGGTATTGTTTCTTCGCTCGTGCACGCAGAGTGCAAACTTTGATTTGCGTTAGGTCTTGTTTATCCGAGTGAGTTTATTCGCCTGCTGGTTTTCGTCTTCCTGTCTGCATGCAGGCGTCCTTGTGCGCGGAGCCCAATGGAGCTGGAGGGTCAGTGGTGGAAAGGAGAGCTCGCAGAGGACATCTATCAGGCCCTGCGTTACAAAGAGCTGCGGTTGCCTGCGTACAAAGGCCAGTCCCCACAGCTGAGCCTTAGACGGTATTTTGCAGACCTTATAGCTATAGTCAGCAATCGCTTCAAGCTGTGCCCGGCAGCCAGGCACTTGGCCGTCTACCTGCTGGACCTGTTCATGGACCGCTATGACATCTCAGTGCAGCAGCTTCACATGGTCGCGCTGTCCTGCTTGCTTTTGGCCAGTAAGTTTGAGGAGAGAGAAGACCGCGTCCCGAAGCTGGAGACGCTGAACAGTCTGGGCTGCATGAGCTCTATGAACCTGGTTCTGACCAAACAGGGTCTGCTGCACATGGAGCTGCTGCTCCTCGAGACGTTTCAGTGGAACCTGTACCTCCCCACCGCCGCTCACTTCATAGAGTACTACCTGCCGGTCGCTGTGAATGAGACGGACCTCCACGACGGCTGGCCGATGGTGTGCATGGAGAAGACCATGCTGTACATGTCCAAATATGCTGACTACTTCCTAGAGGTCTCTTTACAAGACCATGCATTCCTGCGATTCGTCCCGTCCCTGGTTTCCGCGGCGTGTGTTGCCTCTTCCAGGGTGATCTTGCGTCTGTCTCCGACCTGGCCTCCGCGCCTGCAGCGTCTGTCGGCGTACGCCTGGGAGCAGCTGATACCCTGCGTGGAGAGACTTCTAATtgctCATGACAGTGACGTAAAGGAAGCAAACAAGCAGAAACGCCCTCCGCCGAGTGCTCCTCCCGCACAGATGGTGTATCCCGTCCAGGGTCCGAGCGTGTCCTTGCATCAGTACATGCAGCGGCCGAACACGCAGTACATGCAGCAGAACTGCCAGCCGGTGGTGGTGTCCTCACAAGGTCCGCCGGCGTACCTGACGCACACGGCTCCTCTGCACGGCCTCACGCAGACGCAGGCCGCGGACGGCAAGGTGAACGTCTCCAGCAGGGCTTACCAGGTGAACTCGCTCTACCCCTGCGCCGCTCCCTGCTTCGACCGGTGATGAACGCGTCGGACGTATACGCCGCACAGGGGAGAGTTTATATTCGTAACGCCGGCACGCCGCTCTTAACCGTTACTTCAGCTGCTGAGTCCTTTTTTAATTTACGCGATCGGGGTGAAAGCTGGGTGATTCATATCACTGCGATGTTCATGAGCTGTGGGATAATACGAAATGTGCAATATTCTGATGCTGTCGTGCATCAGCCCCTGAATACAGCCTCGTGGTGTTTCGTTCGTTGTGTTAAGTTTACTATTATTTACGGCCATCTTTCATAAATGAAGACATAATGGTAGTTCAAATCAACATTGTGTGGGAAATTAATGTGGTTTTTACTAGCACAAGCGAGTGTTATTTTTGCTCTACCTCACTGAATGCAGACTATTGTTACAAATGCACTTTGGTacagtgttgtttatttgtttgttttgtttttcctttttaaataaaaacgcTACGTTTCTGTTGTAGCTAGTTTCGGGTTTGGGTGTGGAAATTTTACACTGAGGTTTGTAGCCACTGGAACATGTTCATGATTAAAATTCACCCTTCTCGGATTCGCACGAACGCTGGCATATTGAAACTATTAGTTCTAACTGTGCAATCCAGTtcaatgtattgtttatttattctttttcttggATATCACTATGATTATTACAAAAGTTTGTTATtgctgttttaaacaaatgcgTGCTCTCTTATTAAAGTGATCACGACTATATAAAGacacagaaaaaacacaaacacacttatttatttattcattcatgttatGTAGAATGGTAATGggacttttaatttgtaatttttgtgcTCGCAACGGTCACAAAAAATGGTTACAATTCACGAACATGGTCAAGGACTAATTACAATTtctcaattttaatatattaaagtaaGAGTAAATTTAGGGCAAGtgtaattgaaattaaatttgttacaaaatacacaaaccaaGCCCTAAACAACGAAAAGACGacttaaaaacacagttttgtgGTTGTGTAATCGATGTCTGACCGCAAATGTATCCCTTTTCTTGTTCTGTTTGTACCGTTACGATTTATTCtctagacttttattttgaagaataccATAGTAGCTGTGGCTGTAAAGCCCTTTTAGTTTGTTACCCTCGTAGATAAAACCTCGTCAGTCAGAGAGTATTAAAGACACTtaaacagttatatttatagtaatgtatttatactttaacaaaattaatattataaataaatataacaggGTGTCTGACagcaaatgt

Function

symbol description
ccnj Is expressed in rhombomere 4. Orthologous to human CCNJ (cyclin J).

NR:

description
PREDICTED: cyclin-J

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255381.1 True 2496 mRNA 0.47 6 20645694 20651555

Neighbor

gene id symbol gene type direction distance location
herc4 LOC107689351,LOC107750134,LOC107689752,LOC107728328 coding downstream 356 20624977 ~ 20645338 (-)
sirt1 sirt1,LOC107565065,LOC106604510 coding downstream 29282 20607257 ~ 20616412 (-)
cacul1 cacul1,LOC107689372,LOC107562395 coding downstream 39188 20598724 ~ 20606506 (-)
mypn LOC107689354,LOC107562382,LOC107750149,LOC107565072 coding downstream 49705 20572320 ~ 20595989 (-)
LOC122356970 gpatch11,LOC107689758,LOC107562390,LOC107708600 coding downstream 98702 20542775 ~ 20546992 (-)
blnk LOC107750133,LOC107728331,LOC107689749,LOC107689365 coding upstream 10647 20662202 ~ 20686920 (-)
vent NA coding upstream 293029 20944584 ~ 20946525 (-)
vox vox,LOC107750144,LOC107689360,LOC107580632 coding upstream 296432 20947987 ~ 20949698 (-)
LOC122356249 LOC107686530 coding upstream 303912 20955467 ~ 20997713 (-)
LOC122356507 LOC107708201,LOC107658777,LOC107554523 coding upstream 376210 21027765 ~ 21042154 (-)
G95537 NA non-coding downstream 24975 20620047 ~ 20620719 (-)
G95524 NA non-coding downstream 125601 20518600 ~ 20520093 (-)
G95519 NA non-coding downstream 130383 20514773 ~ 20515311 (-)
G95506 NA non-coding downstream 407467 20236678 ~ 20238227 (-)
LOC122356209 NA non-coding downstream 504736 20108191 ~ 20140958 (-)
G95549 NA non-coding upstream 177223 20828778 ~ 20829053 (-)
G95623 NA non-coding upstream 195742 20847297 ~ 20926743 (-)
G95635 NA non-coding upstream 324724 20976279 ~ 20976497 (-)
G95640 NA non-coding upstream 344528 20996083 ~ 20996511 (-)
G95641 NA non-coding upstream 347485 20999040 ~ 20999265 (-)
G95526 NA other downstream 74132 20570038 ~ 20571562 (-)
G95511 NA other downstream 148830 20493642 ~ 20496864 (-)
G95510 nid1,nid1a,LOC107691203,LOC107750138,LOC107728305,LOC107689759 other downstream 153618 20488785 ~ 20492076 (-)
G95520 NA other downstream 158990 20479925 ~ 20486704 (-)
LOC122356211 gng4 other downstream 370308 20264726 ~ 20275386 (-)
G95646 adgra1,LOC107750141,LOC107567015,LOC107663568,LOC106903219,LOC107720869 other upstream 355917 21007472 ~ 21180217 (-)
LOC122357128 NA other upstream 1485833 22137388 ~ 22143970 (-)
tmem254 LOC107689576,LOC107653189,LOC107742085,LOC107711410 other upstream 1500187 22151742 ~ 22156859 (-)
klc1b klc4,LOC107742075,LOC108263390,LOC106963894 other upstream 1579894 22231449 ~ 22250313 (-)
G95932 NA other upstream 1584549 22236104 ~ 22238570 (-)

Expression


Co-expression Network