utp25 (diexf,LOC107668835,LOC107707040,LOC107675582,LOC107757128)


Basic Information

Item Value
gene id utp25
gene name diexf,LOC107668835,LOC107707040,LOC107675582,LOC107757128
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 11771428 ~ 11799032 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255455.1
GTGTGATAGCGCTCTTAACTACCCGTGAGGAAAACGCGTCCGCGAGTTACACACGTGTAGCATAGAAACATGGGCAAAAGAAGGCGAGGAAACCAAGAGATTGCAAGTTTAACtaagaaacagaagaaacatttaaaagaatttgGAGAACAACACCCTTTTCACGATGACGTTGTTGGCAAACCGGAGAAGACTCAGATTTTGCGTTTGCCTGACAGTCCACAACGCCCTGAACCTGACAGCGAGGAAGACCATGATGAAGAGCAGCAGTCTGCTTATCAGAAACTGCTGTCCACCATGATCCAAGGTGCTGATGACAACAGTGAAGATGAAGAAAGTGATGATGAGGATGACGGAGAGGAAATTCAAGgaGAAAGTGAAGAGGAAGAAGACGACGATGACGACGAGGAGGAAGGTGATGTTGCCGAGGATGATTTAGAAGAAAAGGTGGGCGAAACGCCTTATAATTCGCAAAATAAAGAGCAGCCTGAAAAGACAAATGAAGATATAGAAGAAAACGAAGAGGGAGAGTTTACGGATAAGAAGAATGAAGCTGCGTTCTGTCTGGAGACCAACCTGCCTGTGGAAGGAGAGCAAAACATGGGAGAGCAGGAGGAGGAAGACATGTTTGTGAAGCACCAGGAGGCTGAACTCAGTGAAGAGGAAGTGGGACAAATCTTACAAGGATCAAAGAACAAGACTCTGATTAAGTGGCCAAAGCTGGGCACTCTGCAGTGCACGCGTCCACTGGAACGTTTCCCAGCATTGGGGCAGCTCTCTTCTGCCCCTCTTCCGACCTTTCACAAAACACTGGAGGCAAACTGGACCTTGTTAAACCAGCCCTTTGCACATGGAGGTGCTGTGACAGATGCCACTGACCTACAGAAGGAATTGCTCGGGCTCATGGgtaCATACAGGGATGTGCATTTTGCGAACAGCTCCCTCTTGAAGGAGGCCAAGGAAGCGCGGAGTGCGTACTGTCTCCATGTGCTAAACCATGTGTTAAAGGCAAACACTCGCGTTATTGGAAATAATGCCAAGATGAAGGAAACTAAAGATATAAACGAGGAGTTTCGGGATCAGGGCATTACTAGACCAAAGGTTTTGATTCTGGTGCCTTTCAGAGACGGAGCGCTGCAAGTGGTCCAGACCTTCATAACACTTTTAGAGCCTAAAGGGAAAATAATGGACGTCAGTAACAAGAAGAAGTTTAAGGACGAGTATGGAGATGGGTCGGGAGAAAGACCGCCTAAACTTCACAGACCTGATGACTACCATGCTGTCTTTTCTGGGAATGTAGATGACCATTTCAGAATAGGTGTATCTATCATGAAACGCAGTATGCGTCTCTATTCTCCTTTTTACTCTTCTGACATCATCATTGCGTCTCCGCTGGGACTGCGCACGGTTCTGGGTGCcgacggggaaaaaaaaagagactttgaCTTCTTGTCTTCCATCGAACTTCTGGTTGTGGACCAGGCGGATGTGTTCCTCATGCAGAACTGGGAACACTTGCTGCATGTGTTGAAGCATTTGAATTTGCAGCCGCTGGATTCTCATGGTGTAAATTTCTCCCGAGTGCGCATGTGGAACCTGAACAACTGGGCAGCGCATTATAGACAGACGCTGGTGTTCAGTGCCATACAAGAGCCTCAGATCACCAACATCCTTACCAAGCACTGCCACAACTACAGGGGCCAAGTGTGCAGTAAAGTCATTCCAAAGGTGGGCTCAATCTGTCAGGTGCTCGTTCAGGTGCCGCATGTATTCCAGATGTTCCAGTCTGACAGCTTTATGGACCAGGATGCCAGGTTCCAGTTCTTTGTGGACAAGATCCTGCCCCAGTACAGAGACTCTATCATGTCCCACACTTTCATTTATGTGCCATCGTATTTTGACTTTGTTCGTCTGCGAAACTACCTGAAGAAGGAAGATATCAGTTTTGCTAGTGTGAGCGAGTACTCTCTGAGATCGGAGGTGTCCCGAGCTCGACATTTCTTccagaaaggagaaaaacagtTTATGCTATTCTCTGAGAGATTCCATTTCTACAAGAGATACACAATCAAGGGGATCCATAACCTGATATTCTACGGGTTGCCCACATACTCTCACTTCTACAGTGAAGTGTGTAACATGCTTCAGGCCGGCGTCAGAGAGGATGGTGGTTCTGTCAGCTTCACCTGCACGGCCCTGTACTCCCGATATGACATGCACCGCCTGGCTGCCATCACCGGGGCTGAGCGGGCCGCTCAGATGCTGCAGTCCAAAAAAACAGTGCACCTTTTCATCACAGGGGAGGAGAAAAACACATGAACGGGTACTACATTTTCAACCTGTCACACAAAGTATTTTCCTTCAATTAAAATCCAGTCATTTGCTTGAATGTGATCTTGTTCTAAtgtccttttgttttcttttttaaatataaagtcttCTTTTACTGTAGTCACAGCCCAGATCTTTtccagtgtgtgttttttttctacttttaaaaGGGTCCAACAATAAGAGAAATTCTGACCAGGTGAAATGTCACCTGTCCTGTCAGAAAAGTCTTATATTGTCACTGTGGCTTACATTGATCATGCACGTGTAAACCTTTAGGTAATTAAATCTTGCAAATTGCATTGAACGGCTAAATCTAATATGCACTCTTCAAGAGATCTTAGGATTAAATCCTCCTTTAATGTCGAGGCTAAATTATGGGAAAAGTCATCATTAAAACGATTAAAACCGTTATATACCAAATATCAGAAAAATATGCACGGAGTTGCAGTTAAGCTCATTTCGAAAGTGAATAAGATGAATTTGATTTTAGTAATTTCATAATCCCTGCTTTTTATTGTGGCTTGTTAAATGACACGAGCAAGAGTTCACCTCTAATGATCATCCTGGAAACGACTGTAATTCATCTAATTACCTCCCAATGTGACGGATCTGTATGAATTGGaacatttgacattttggtTTTTAAGTCACATTATTTCTCAGACTCCCCAGTGATCAGATGCGCtcttgtatttttctttttttttttgcactgtttttcTGTCAGTTGGAAAATGGAGCagctgtttcacacacacacacacacactctctctctctatttcacAGATGTGCGCCCTCTGTCTCTGTAGCTGGCACACATGTACACtcacatgtaataaataatgaaagaaatgagTGTCAGTTGTTTGGTTAGGGCCAGCATCTGACTATATCAAACAAAACCATTGATCCATCCAACAAATCTCCTCCCAGTTTTTCCCCTGAACACACAATCCTGCTGTGCtgccttttgattttttttttttttttttttctcccaaaacCCTGCTGACCTCTGAACACTCATACATTGAtgctgcaaaacattttttctgcTGAGCTTGCATATCAGTATCTGTATCGTTATAGTGCTCCAAATCTAAGgaattttatctaaaataaactCTCATATGTATTGTTGGA
>XR_006252352.1
AGTGTGATAGCGCTCTTAACTACCCGTGAGGAAAACGCGTCCGCGAGTTACACACGTGTAGCATAGAAACATGGGCAAAAGAAGGCGAGGAAACCAAGAGATTGCAAGTTTAACtaagaaacagaagaaacatttaaaagaatttgGAGAACAACACCCTTTTCACGATGACGTTGTTGGCAAACCGGAGAAGACTCAGATTTTGCGTTTGCCTGACAGTCCACAACGCCCTGAACCTGACAGCGAGGAAGACCATGATGAAGAGCAGCAGTCTGCTTATCAGAAACTGCTGTCCACCATGATCCAAGGTGCTGATGACAACAGTGAAGATGAAGAAAGTGATGATGAGGATGACGGAGAGGAAATTCAAGgaGAAAGTGAAGAGGAAGAAGACGACGATGACGACGAGGAGGAAGGTGATGTTGCCGAGGATGATTTAGAAGAAAAGGTGGGCGAAACGCCTTATAATTCGCAAAATAAAGAGCAGCCTGAAAAGACAAATGAAGATATAGAAGAAAACGAAGAGGGAGAGTTTACGGATAAGAAGAATGAAGCTGCGTTCTGTCTGGAGACCAACCTGCCTGTGGAAGGAGAGCAAAACATGGGAGAGCAGGAGGAGGAAGACATGTTTGTGAAGCACCAGGAGGCTGAACTCAGTGAAGAGGAAGTGGGACAAATCTTACAAGGATCAAAGAACAAGACTCTGATTAAGTGGCCAAAGCTGGGCACTCTGCAGTGCACGCGTCCACTGGAACGTTTCCCAGCATTGGGGCAGCTCTCTTCTGCCCCTCTTCCGACCTTTCACAAAACACTGGAGGCAAACTGGACCTTGTTAAACCAGCCCTTTGCACATGGAGGTGCTGTGACAGATGCCACTGACCTACAGAAGGAATTGCTCGGGCTCATGGgtaCATACAGGGATGTGCATTTTGCGAACAGCTCCCTCTTGAAGGAGGCCAAGGAAGCGCGGAGTGCGTACTGTCTCCATGTGCTAAACCATGTGTTAAAGGCAAACACTCGCGTTATTGGAAATAATGCCAAGATGAAGGAAACTAAAGATATAAACGAGGAGTTTCGGGATCAGGGCATTACTAGACCAAAGGTTTTGATTCTGGTGCCTTTCAGAGACGGAGCGCTGCAAGTGGTCCAGACCTTCATAACACTTTTAGAGCCTAAAGGGAAAATAATGGACGTCAGTAACAAGAAGAAGTTTAAGGACGAGTATGGAGATGGGTCGGGAGAAAGACCGCCTAAACTTCACAGACCTGATGACTACCATGCTGTCTTTTCTGGGAATGTAGATGACCATTTCAGAATAGGTGTATCTATCATGAAACGCAGTATGCGTCTCTATTCTCCTTTTTACTCTTCTGACATCATCATTGCGTCTCCGCTGGGACTGCGCACGGTTCTGGGTGCcgacggggaaaaaaaaagagactttgaCTTCTTGTCTTCCATCGAACTTCTGGTTGTGGACCAGGCGGATGTGTTCCTCATGCAGAACTGGGAACACTTGCTGCATGTGTTGAAGCATTTGAATTTGCAGCCGCTGGATTCTCATGGTGTAAATTTCTCCCGAGTGCGCATGTGGAACCTGAACAACTGGGCAGCGCATTATAGACAGACGCTGGTGTTCAGTGCCATACAAGAGCCTCAGATCACCAACATCCTTACCAAGCACTGCCACAACTACAGGGGCCAAGTGTGCAGTAAAGTCATTCCAAAGGTGGGCTCAATCTGTCAGGTGCTCGTTCAGGTGCCGCATGTATTCCAGATGTTCCAGTCTGACAGCTTTATGGACCAGGATGCCAGGTTCCAGTTCTTTGTGGACAAGATCCTGCCCCAGTACAGAGACTCTATCATGTCCCACACTTTCATTTATGTGCCATCGTATTTTGACTTTGTTCGTCTGCGAAACTACCTGAAGAAGGAAGATATCAGTTTTGCTAGTGTGAGCGAGTACTCTCTGAGATCGGAGGTGTCCCGAGCTCGACATTTCTTccagaaaggagaaaaacagtTTATGCTATTCTCTGAGAGATTCCATTTCTACAAGAGATACACAATCAAGGGGATCCATAACCTGATATTCTACGGGTTGCCCACATACTCTCACTTCTACAGTGAAGTGTGTAACATGCTTCAGGCCGGCGTCAGAGAGGATGGTGGTTCTGTCAGCTTCACCTGCACGGCCCTGTACTCCCGATATGACATGCACCGCCTGGCTGCCATCACCGGGGCTGAGCGGGCCGCTCAGATGCTGCAGTCCAAAAAAACAGTGCACCTTTTCATCACAGGGGAGGAGAAAAACACATGAACGGGTGGAGAGCGGAATTGTGGAGTACATGAGCTTATCTGCATCAGAAAAGTGTCTCCTGAGGCTCTGGGGTTCCTGTCTGGCATTGGTGTGTTCATCTTTCTTGTGATTGTACTCTTCCTTTACCTCAATAACAAAC

Function

NR:

description
digestive organ expansion factor homolog

GO:

id name namespace
GO:0035265 organ growth biological_process
GO:0030163 protein catabolic process biological_process
GO:0031017 exocrine pancreas development biological_process
GO:0048546 digestive tract morphogenesis biological_process
GO:0031648 protein destabilization biological_process
GO:0005730 nucleolus cellular_component

KEGG:

id description
K14774 UTP25, DEF; U3 small nucleolar RNA-associated protein 25

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255455.1 True 3479 mRNA 0.44 13 11792148 11799031
XR_006252352.1 False 2459 transcript 0.48 15 11771428 11799032

Neighbor

gene id symbol gene type direction distance location
sertad4 sertad4,LOC107707050,LOC107668837,LOC107588595,LOC107548617,LOC107757095 coding downstream 21414 11739395 ~ 11750014 (-)
LOC122356134 NA coding downstream 38192 11728523 ~ 11733236 (-)
trmt5 trmt5,LOC107707083,LOC107668822,LOC107588721,LOC107757133 coding downstream 90111 11678617 ~ 11681317 (-)
six4a LOC107668780,LOC107708200,LOC107588724,LOC107757135,LOC107675560,LOC107548598 coding downstream 109842 11654390 ~ 11661586 (-)
dhrs7 dhrs7,LOC107588602,LOC107548599,LOC107588604 coding downstream 165165 11602620 ~ 11606263 (-)
kcns3a kcns3a,LOC107681537,LOC107588718,LOC107757122,LOC107708176,LOC107585531,LOC107675527 coding upstream 278498 12077530 ~ 12081414 (-)
wdr35 wdr35,LOC107707974 coding upstream 283111 12082143 ~ 12096686 (-)
matn3b matn3b,LOC107706968,LOC107675558,LOC107757123,LOC107585476,LOC107588687 coding upstream 298227 12097259 ~ 12110126 (-)
bend3 LOC107588588,LOC107706947,LOC107681544,LOC107757121,LOC107675557 coding upstream 305666 12104698 ~ 12110132 (-)
pdss2 pdss2,LOC107681545,LOC107706935,LOC107757119,LOC107675584,LOC107585477,LOC107588587 coding upstream 314874 12113906 ~ 12139838 (-)
G93099 NA non-coding downstream 33197 11738017 ~ 11738231 (-)
G93063 NA non-coding downstream 141679 11629440 ~ 11629749 (-)
G93062 NA non-coding downstream 146288 11624798 ~ 11625140 (-)
G92935 NA non-coding downstream 358175 11412183 ~ 11413253 (-)
G92934 arhgap22,LOC107588697,LOC107668831,LOC107708000,LOC107673870,LOC107548604 non-coding downstream 359989 11410630 ~ 11411439 (-)
G93111 NA non-coding upstream 2983 11802015 ~ 11802286 (-)
LOC122356216 NA non-coding upstream 105736 11904768 ~ 11938181 (-)
LOC122357025 LOC107585516,LOC108412594,LOC105899417 non-coding upstream 184679 11983711 ~ 12029622 (-)
G93144 NA non-coding upstream 237580 12036612 ~ 12036818 (-)
G93148 NA non-coding upstream 242663 12041695 ~ 12041929 (-)
six1a six1a,six1,LOC107588725,LOC107675533,LOC107708210,LOC107668775,LOC108434988 other downstream 123393 11643930 ~ 11648035 (-)
zdhhc16a zdhhc16,zdhhc16a,LOC107708229,LOC107668773,LOC107673955,LOC107548628 other downstream 238971 11525403 ~ 11532457 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other downstream 552443 11200552 ~ 11218985 (-)
G92819 NA other downstream 836097 10924944 ~ 10935331 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other downstream 1136862 10632250 ~ 10634566 (-)
vti1b vti1b,LOC107655020,LOC107705385,LOC107724223,LOC107675543 other upstream 479422 12278454 ~ 12293594 (-)
tmem234 tmem234,LOC107675523,LOC107576456 other upstream 630165 12429197 ~ 12430778 (-)
LOC122356414 NA other upstream 758045 12557077 ~ 12597302 (-)
LOC122356823 LOC107654911,LOC107705409,LOC107600568,LOC107683712 other upstream 1510920 13309952 ~ 13325051 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other upstream 1721381 13520413 ~ 13558834 (-)

Expression


Co-expression Network