spock2 (spock2,LOC107668819,LOC107673954)


Basic Information

Item Value
gene id spock2
gene name spock2,LOC107668819,LOC107673954
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 10924934 ~ 10951268 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255465.1
ctctatagaGGGAAGACGCATCCTGTAATCAGGTCACACTTCACTGTAGTCTCAGCATCCGTCTCTCGCCCTTTAAAGCAGAGGAATCGAGACATCAGACAAGCGGAATAATGGTGTGGATAAATGATCTGCAATCTCTTCTCTTCCCTCTCCTTGTGCTCGTGCAGTTTTCCGTGCAGGTGGACGTTAAGAACGGGAAAGAAGCGGAGAAAACGGGGAATTTCATGGAAGATGAACAGTGGCTGTCCACCATTTCCCAGTACAGTCGCAAGATCAAGCACTGGAACCGCTTCAGAGACGAAGTGGAGgACGATTACATCCGATCATGGGATGAAAGTCAAGGCTCCAATGAAAaTGTTGACACCACTAAGGATCCTTGCCAGAAAGTCAAATGCAGCCGACATAAGGTGTGCGTCGCCCAGGGCTACCAGCGTGCTGTGTGCGTCAACCGCAAAAAGCTGGAGCACAGGTTGAAGCAGCAGGTTATTAGACAGCAGCAGGAGAGTAACTGTAAATCTTGCCCAGTATCTTCTTCTGGTCCTGTTTGTGGCTCTGATGGACACAACTACGCCTCTCAGTGCAAACTGGAGCAGCAGGCTTGTCTCACCGGAAAAGAGTTGAAAGTAAGATGTGCTGGTCTCTGCCCCTGTACCGCCACCGCGGCTCCTGCTACAGACGTGGACAGCAAACACGAGAGTTGCACAGGGCAGGACCTGGCAGATCTGGGAGATCGCCTGCGGGACTGGTTCCAGCTGCTCCAAGGCAACGGCAAGCAGAACAGCACAGGGAATCCTATAGCCAGTTCTGCATCGAtTGTGGACCGAACTCTTGTTGCGACCTGTAAGGACTCTATTGGCTGGATGTTCTCTAAGCTGGATACGAACAGTGATCTGTATCTGGATCAAGCTGAGCTGTCTGCCATTAATCTGGACAAGTATGAAGTGTGCATACGGCCCTTCTTCAACTCCTGTGACTCCTATCGTGATGGCAAAGTTTCCACAGCTGAGTGGTGCCTCTGCTTTTGGAGAGAAAAGCCTCCCTGCCTGGCTGAGCTAGAGCGAATCCAAGTGCAAGAAGGAGCCAAGAAGAAACCGGACACATACATTCCCAGCTGTGATGAGGACGGATTTTACAGGAGACTGCAGTGTGACAAGAGCAGAGGGGAGTGCTGGTGTGTGGACCAGCATGGAGGAGAGTTAATGGGCTCCAGAATCCATGGCAACCCCGACTGTGACGAGGTGGTCACGTACTCGGGCGATTTTGGCAGCGGGCTCGGATGGGAAgatgaggaggaaaaggaggcGGAGGAGAACGGCGAGGAGGCTGAGGAGGAAGAAGGGGAGGTGGGGGAGGTAGATGATGGCGGATACATTTGGTAAAACGAAACGCGGTTCCCGCCTTGTTCGACGTAGCTTTCTGTGGCCCATTTCTACAGAGGCAGCTCTATCTTCTGACATTAAATGGTGGACACTGGAGGGCCTGTCATCTTTATACTGCACTCCGAACAGCATTGACTTGGGGAGGGTGGGGGAGGCGGCTTGGTTAGTGTTAGCTGTAGTGAGATTACGGTATTGGGAAAGAGTTTTCGATTATTGGGCTTATGGATACTTgtgaaacatatttttgttgtaagtgCAAGAGTTTTCTCTGAATCAGTCTCTAGCATCTGCAAACATGAACTTAGGCGCTTGATAGGTGTGATGTGATGCATTCTTATGCAAGtctaatatatacatactttcGTCACTATACATTCAGAAATGATACCTGTTTAGTCTAAAGCGACTTTTTAAAGTATGTATATAAAGATAGACAGGCTTCAGGGTTTAACCTGTTTCACTAGATCTTCTGTCGACCATCAGCAACTGCTTTCTTTGGGAACTGAGACTGCTGCTaatgtttttgctgttattcttttaaatgtccTCCAAATGATTTAGCGTACGTGAACACGGATTACTATAAagacaaagagacacagagTCCAAAAGCATTCAAAGCTAAGCTAGCTTAGCTTAGCTCAAAAAGCTAAGACTGTTATCCTGTTCTTTTGTGGCTGAAACAGTCTCTGCATCATTTCTTGAAGTAGATATAGTCGTAAATGTCTTGAGATAAAGTAGCCTTGTCAGTGTATTTGAAGAACTATTTCTCCACGCTCACAAACTACAACCGATTTTAGGCTACTTGCCAGAAATACACAATGCACTTCTACAAGACGATCCTTGTCCTAAaggcactatttttttttttttcctgtcttttgTGTAATAATCCACCGAAACCAGAGATGGCAAAGCAttctattttcatataaattacGCCTCAATGCTGTAGCTTTCTCCCTCACTCCGACGTCCAAatcattgttttctttgaaatggACAGTCATAAATCCTCAGATATGTACGCTCTGGTTTCATATGTCTGTCATAATAGAATTTGCTTATACTCCACTAGGTCAGGCTGTAATACGGTACTTCTGATGCAACGCTGCTTTTATAACGAGGCAGCGTATGGATGAACAGGAGAGGCAGGAATGAGCTTTGGAAAATGCATTCTGACATATTCTCTCTCATAAACCCAAAGGGACCAATCTGTCTTTGCAGATGTCTTCTAATCAGATCTTCCCATCATTTGCAGTGAAAGATGTGTTGGCTGTAATGTTCCTAGGTGTAAATCTGGTGCTGCGGGGATTTATATTCAAGATCTGAATCTTAAAATCTACGACTAAAGGTGAAGTACATGACTCccgcagtaaaaaaaatatctaaagcGTTCAGTTTTTAGGGTTAAAATGCTGGGAAACGTGTATGAATTACAGGCTCGGCCCGGTATGATAATTCGCTCCACATAGGCAAGAGAAAACGCATTTGATATGGTAACATCCCCAGCGTAAACACATTCATCAATGTACCGCGGAGTCTACATAAGTATATAAATCCTCCAAATGTCATTGAGACGAATCTTGACGATATTTAAATTAGTTGTGGATTATCATAGACGACGCCACCTTGCCAGTGTGATGGAGTGGAAAGATGGCCTGCTCATTAAAAGTCAATAGTGAATGTCCTGATGTCTTACTCAGCAGTGTACAGGAGTCTGCTAACAGTGATGTTATACCACTTGGACTAGTGTATGATTGTATTGTACTGTACATgccattattattgtaaatacttGGATTTACTgattagaaaacattatatttacgCTGAGTTGCagtatatttgcatttagttgCATGTTTCTTTGTCCGAGTGTGTCATCTTTCTTGCCTGAATATGATTAAAGGCACTGGGCCCGAAA
>XM_043255466.1
tctctatagaGGGAAGACGCATCCTGTAATCAGGTCACACTTCACTGTAGTCTCAGCATCCGTCTCTCGCCCTTTAAAGCAGAGGAATCGAGACATCAGACAAGCGGAATAATGGTGTGGATAAATGATCTGCAATCTCTTCTCTTCCCTCTCCTTGTGCTCGTGCAGTTTTCCGTGCAGGTGGACGTTAAGAACGGGAAAGAAGCGGAGAAAACGGGGAATTTCATGGAAGATGAACAGTGGCTGTCCACCATTTCCCAGTACAGTCGCAAGATCAAGCACTGGAACCGCTTCAGAGACgACGATTACATCCGATCATGGGATGAAAGTCAAGGCTCCAATGAAAaTGTTGACACCACTAAGGATCCTTGCCAGAAAGTCAAATGCAGCCGACATAAGGTGTGCGTCGCCCAGGGCTACCAGCGTGCTGTGTGCGTCAACCGCAAAAAGCTGGAGCACAGGTTGAAGCAGCAGGTTATTAGACAGCAGCAGGAGAGTAACTGTAAATCTTGCCCAGTATCTTCTTCTGGTCCTGTTTGTGGCTCTGATGGACACAACTACGCCTCTCAGTGCAAACTGGAGCAGCAGGCTTGTCTCACCGGAAAAGAGTTGAAAGTAAGATGTGCTGGTCTCTGCCCCTGTACCGCCACCGCGGCTCCTGCTACAGACGTGGACAGCAAACACGAGAGTTGCACAGGGCAGGACCTGGCAGATCTGGGAGATCGCCTGCGGGACTGGTTCCAGCTGCTCCAAGGCAACGGCAAGCAGAACAGCACAGGGAATCCTATAGCCAGTTCTGCATCGAtTGTGGACCGAACTCTTGTTGCGACCTGTAAGGACTCTATTGGCTGGATGTTCTCTAAGCTGGATACGAACAGTGATCTGTATCTGGATCAAGCTGAGCTGTCTGCCATTAATCTGGACAAGTATGAAGTGTGCATACGGCCCTTCTTCAACTCCTGTGACTCCTATCGTGATGGCAAAGTTTCCACAGCTGAGTGGTGCCTCTGCTTTTGGAGAGAAAAGCCTCCCTGCCTGGCTGAGCTAGAGCGAATCCAAGTGCAAGAAGGAGCCAAGAAGAAACCGGACACATACATTCCCAGCTGTGATGAGGACGGATTTTACAGGAGACTGCAGTGTGACAAGAGCAGAGGGGAGTGCTGGTGTGTGGACCAGCATGGAGGAGAGTTAATGGGCTCCAGAATCCATGGCAACCCCGACTGTGACGAGGTGGTCACGTACTCGGGCGATTTTGGCAGCGGGCTCGGATGGGAAgatgaggaggaaaaggaggcGGAGGAGAACGGCGAGGAGGCTGAGGAGGAAGAAGGGGAGGTGGGGGAGGTAGATGATGGCGGATACATTTGGTAAAACGAAACGCGGTTCCCGCCTTGTTCGACGTAGCTTTCTGTGGCCCATTTCTACAGAGGCAGCTCTATCTTCTGACATTAAATGGTGGACACTGGAGGGCCTGTCATCTTTATACTGCACTCCGAACAGCATTGACTTGGGGAGGGTGGGGGAGGCGGCTTGGTTAGTGTTAGCTGTAGTGAGATTACGGTATTGGGAAAGAGTTTTCGATTATTGGGCTTATGGATACTTgtgaaacatatttttgttgtaagtgCAAGAGTTTTCTCTGAATCAGTCTCTAGCATCTGCAAACATGAACTTAGGCGCTTGATAGGTGTGATGTGATGCATTCTTATGCAAGtctaatatatacatactttcGTCACTATACATTCAGAAATGATACCTGTTTAGTCTAAAGCGACTTTTTAAAGTATGTATATAAAGATAGACAGGCTTCAGGGTTTAACCTGTTTCACTAGATCTTCTGTCGACCATCAGCAACTGCTTTCTTTGGGAACTGAGACTGCTGCTaatgtttttgctgttattcttttaaatgtccTCCAAATGATTTAGCGTACGTGAACACGGATTACTATAAagacaaagagacacagagTCCAAAAGCATTCAAAGCTAAGCTAGCTTAGCTTAGCTCAAAAAGCTAAGACTGTTATCCTGTTCTTTTGTGGCTGAAACAGTCTCTGCATCATTTCTTGAAGTAGATATAGTCGTAAATGTCTTGAGATAAAGTAGCCTTGTCAGTGTATTTGAAGAACTATTTCTCCACGCTCACAAACTACAACCGATTTTAGGCTACTTGCCAGAAATACACAATGCACTTCTACAAGACGATCCTTGTCCTAAaggcactatttttttttttttcctgtcttttgTGTAATAATCCACCGAAACCAGAGATGGCAAAGCAttctattttcatataaattacGCCTCAATGCTGTAGCTTTCTCCCTCACTCCGACGTCCAAatcattgttttctttgaaatggACAGTCATAAATCCTCAGATATGTACGCTCTGGTTTCATATGTCTGTCATAATAGAATTTGCTTATACTCCACTAGGTCAGGCTGTAATACGGTACTTCTGATGCAACGCTGCTTTTATAACGAGGCAGCGTATGGATGAACAGGAGAGGCAGGAATGAGCTTTGGAAAATGCATTCTGACATATTCTCTCTCATAAACCCAAAGGGACCAATCTGTCTTTGCAGATGTCTTCTAATCAGATCTTCCCATCATTTGCAGTGAAAGATGTGTTGGCTGTAATGTTCCTAGGTGTAAATCTGGTGCTGCGGGGATTTATATTCAAGATCTGAATCTTAAAATCTACGACTAAAGGTGAAGTACATGACTCccgcagtaaaaaaaatatctaaagcGTTCAGTTTTTAGGGTTAAAATGCTGGGAAACGTGTATGAATTACAGGCTCGGCCCGGTATGATAATTCGCTCCACATAGGCAAGAGAAAACGCATTTGATATGGTAACATCCCCAGCGTAAACACATTCATCAATGTACCGCGGAGTCTACATAAGTATATAAATCCTCCAAATGTCATTGAGACGAATCTTGACGATATTTAAATTAGTTGTGGATTATCATAGACGACGCCACCTTGCCAGTGTGATGGAGTGGAAAGATGGCCTGCTCATTAAAAGTCAATAGTGAATGTCCTGATGTCTTACTCAGCAGTGTACAGGAGTCTGCTAACAGTGATGTTATACCACTTGGACTAGTGTATGATTGTATTGTACTGTACATgccattattattgtaaatacttGGATTTACTgattagaaaacattatatttacgCTGAGTTGCagtatatttgcatttagttgCATGTTTCTTTGTCCGAGTGTGTCATCTTTCTTGCCTGAATATGATTAAAGGCACTGGGCCCGAAA

Function

symbol description
spock2 Predicted to enable calcium ion binding activity. Predicted to be located in extracellular region. Is expressed in brain and peripheral olfactory organ. Orthologous to human SPOCK2 (SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2).

NR:

description
PREDICTED: testican-2-like isoform X1

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K08136 SPOCK; testican

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255465.1 True 3306 mRNA 0.45 11 10924935 10951268
XM_043255466.1 False 3298 mRNA 0.45 10 10924934 10951268

Neighbor

gene id symbol gene type direction distance location
dnajb12a dnajb12a,LOC107716349,LOC107668821,LOC107707369,LOC107673930,LOC107585300,LOC107588700,LOC108443064 coding upstream 5263 10915644 ~ 10919671 (+)
cuedc2 cuedc2,LOC107585308,LOC107716345,LOC107673918,LOC107588639,LOC107707447 coding upstream 39424 10881919 ~ 10885510 (+)
pax2a pax2a,pax2,LOC101463634,LOC107707401,LOC107668824,LOC107588637,LOC107716343,LOC107585307 coding upstream 96574 10796082 ~ 10828360 (+)
chst3a chst3a,LOC107708342,LOC107588701,LOC107673894,LOC107683746,LOC107585362,LOC107716304 coding upstream 235496 10681748 ~ 10689438 (+)
lrit2 lrit2,LOC107707486 coding upstream 256045 10663971 ~ 10668889 (+)
pald1b pald1b,LOC107588630,LOC107707320,LOC107668836,LOC107716354,LOC107673876 coding downstream 18075 10969343 ~ 10981784 (+)
qrfpra LOC107668764,LOC107673889,LOC107716286,LOC107564357,LOC107564360,LOC107588699 coding downstream 34817 10986085 ~ 10989734 (+)
rps24 rps24,LOC107673958 coding downstream 39294 10990562 ~ 10993312 (+)
zmiz1a zmiz1a,LOC107588626,LOC108443181 coding downstream 82679 11033947 ~ 11146626 (+)
ppifa ppifa,LOC107668776,LOC107588732,LOC107564349,LOC107673899,LOC108442288,LOC108263515 coding downstream 198728 11149996 ~ 11152447 (+)
LOC122357062 NA non-coding upstream 161243 10753233 ~ 10763691 (+)
G92675 NA non-coding upstream 222831 10657508 ~ 10702103 (+)
G92671 slc18a3,slc18a3a,LOC107708354,LOC107683739,LOC107716340,LOC108442244 non-coding upstream 279697 10642556 ~ 10645237 (+)
G92563 NA non-coding upstream 615158 10309237 ~ 10309776 (+)
G92552 NA non-coding upstream 648756 10275584 ~ 10276178 (+)
G92731 NA non-coding downstream 8152 10959420 ~ 10961696 (+)
G92746 NA non-coding downstream 31672 10982940 ~ 10983279 (+)
G92748 NA non-coding downstream 32970 10984238 ~ 10984645 (+)
LOC122356274 NA non-coding downstream 53642 11004910 ~ 11022056 (+)
G92767 NA non-coding downstream 251386 11202654 ~ 11203684 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other upstream 504508 10416240 ~ 10420426 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other upstream 675209 10205113 ~ 10249725 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other upstream 1490329 9430178 ~ 9434605 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other upstream 1760820 9161517 ~ 9164114 (+)
spef1 zgc:66426,LOC107601866,LOC107725472,LOC107666492,LOC107743614 other upstream 1835813 9080848 ~ 9089121 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other downstream 13587 10964855 ~ 10968914 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other downstream 262258 11213526 ~ 11218175 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other downstream 304326 11255594 ~ 11262620 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other downstream 438117 11389385 ~ 11413515 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other downstream 620392 11571660 ~ 11592600 (+)

Expression


Co-expression Network