eif3s10 (eif3s10,eif3a,LOC107666466)


Basic Information

Item Value
gene id eif3s10
gene name eif3s10,eif3a,LOC107666466
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 6873234 ~ 6885961 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255490.1
CGCAGTTCACGTGCGCTAGTCCTTTCTTGCTTGCGCGGCGAGAAGTCACGGCGCGGATGGACAGGCAGAGTCAATAAAACAGCCTCGACTATCTGAAAACTGCCTGCTAGCGAGCCATAACAATGCCAGCCTATTTCCAGAGACCGGAGAACGCTCTTAAGCGGGCAAACGAGTTTCTTGAAGTTGGTAAAAAGCAGCCAGCTTTGGATGTGCTCTACGATGTCATCAAGAGCAAAAAACATCGAACATGGCAGAAGATACACGAGCCTATCATGCTCAAGTACCTGGAGCTCTGCGTGGATCTGCGCAAGAGCCACTTGGCAAAGGAGGGACTGTATCAGTACAAAAACATCTGTCAACAGGTGAACATCAAATCTCTGGAGGATGTGGTCCGTGCTTATCTGAAACTTGCAGAGGAGAAGACTGAGACCGCAAAAGAGGAGTCTCAGCAGATGGTGCTGGACATTGAGGATCTGGACAACATTCAGACCCCAGAAAGTGTTCTGTTGAGTGCCGTTAGTGGTGAAGACACTCAAGACCGTACTGACAGACTTCTGCTCACGCCTTGGGTCAAGTTCTTGTGGGAGTCGTACCGCCAGTGCCTGGACCTGCTAAGGAATAACTCCAAAGTGGAGCGCCTTTACCATGACATTGCTCAGCAAGCATTCAAGTTTTGCCTGCAGTACACTCGTAAAGCAGAATTCCGTAAGCTGTGTGACAACCTGCGAATGCACCTGGGACAGATCCAACGGCATCACAACCAGAGCACTGCCATCAACCTGAACAATCCTGAGAGCCAGTCCATGCACCTCGAGACACGTCTGGTCCAGCTGGACAGCGCTATTAGCATGGAGCTGTGGCAGGAAGCATTCAAAGCAGTTGAAGACATCCATGGACTGTTTGCCCTCTCGAAGAAGCCCCCTAAACCCCAGCTTATGGCTAACTACTATAATAAGGTGTCCACTGTATTCTGGAAGTCTGGCAATGCCTTATTCCATGCCTGCACCCTACACAGACTCTATCACCTCTCCCGGGAAATGCGCAAGAACCTCACCCAAGAAGAGATGCAGAGgatGTCCACTCGAGTGCTGTTGGCCACTTTGTCTATTCCCATCACCCCTGAGCGCACTGATATCGCTCGGCTGTTGGACATGGATGGCATCATTGTGGAGAAACACCGTAGACTGGCTACATTACTTGGTCTTCAGTCTCCACCCACCCGCCAGAGTCTAATCAATGACATGGTGAGGTTCAACTTGCTTCAGTATGTTGTTCCTGAAGTCAAAGAGCTCTACAACTGGTTGGAGGTGGACTTCCACCCTCTTAAACTTTGTGGAAGAGTGACTAAGGTGCTGAACTGGGTGAGGGACCAAGCTGAGAAAGAATCAGACCTGCAGCAGTATGTTCCTCACTTACAGAACAACACCATCCTTCGACTGCTACAACAGGTGGCTCAGATCTACCAGAGCATCGAGTTCAGCAGATTGGCGTCTCTGGTGCCATTTGTAGATGCTTTCCAACTGGAGCGCTCAATTGTAGATGCAGCACGACACTGTGACCTACagGTGCGCATTGATCATACATCTCGAACGCTGAGTTTTGGCTCCGATCTGAACTATTCTACTAAAGAAGATTCTCCAGTAGGTCCGTTCCTACAGAACATGCCCTCTGAACAGATACGGAATCAGCTCACTGCCATGTCATCCTCCTTGGCTAAAGCCATCCAAGTCATCAAACCTGCCTCCTTAATGCAAGAACATGAAGAGCAGAGTCAACAGGCCATCACAGCCTACCTAAAGAATGCCCGCAAAGAGCATCAGCGCATCCTTGCTCGGCGACAAACCATTGAGGAACGCAAAGAGCGTCTGGAGAGCCTCAACATCCAGAGGGAGAAAGAGGAGCTGGAGCAACGGGAGGCAGAGCTACAGAAGGTGCGCAAGGCAGAGGAGGAGCGTCTTAGACAAGAGGCCAAGGAGCGAGAAAAGGAGCGCATCATGCAGGAACACGAACAAATCAAAAAGAAGACCGTGCGTGAGCGACTGGAGCAGATCAAGAAGACTGAGCTTGGAGCCAAGGCCTTCAAAGACATCGATATTGAGGATCTGGAGGAGCTGGACCCTGATTTCATCATGGCTAAACAGGTAGAACAActagaaaaagagaagaaagaactTCAGGAGCGTCTCAAAAACCAGGAAAAGAAGATCGACTACTTTGAGAGAGCCAAGCGCCTTGAGGAGATTCCTCTGATCAAGAAAGCCTACGAGGAACAGCGCATCAAAGACATGGAGTTATGGGAGCTGCAGGAGGAAGAGAGGATCAGCAATATGAAGATGGAGCGTGAGAAGGCACTGGAACACAAGCAGAGAATGTCAAGGATGATGGAGGACAAGGAGAACTTCTTGTCCAAAATTAAAGCTGCTCGAAGCTTCATTTATGAGGAAAAACTCAAGCAGTTCCAAGAACGTTTGGTCGAGGAGCGAAAGAAACGTCTTGAGGACAGAAAGAAGCAGCGTAAGGAGGACAGACGAAAGGCCTTCTATTTTCAGAAAGAAGAGGAGGCCCAGAGAATCCGTGAGGAACAGCTCAAGAAAGagcGGGAAGAGCGTGAACGCTTGGAGCAGGAGCaaagagaggaggaagagcGTGAATACCAAGAGCGCCTGCGTAAACTGGAGGAACAGGAGAGAAAACAGCGTGCCCGACAACAGGAAATTGAGGAGCGTGAACGCCGcaaggaggaggagaggagggcaCCAGAAGAAAAACCCAGCAAGGAGTGGGGTGAACGGGAAGAAGGAGGCTGGAGGAAGCGTGGTGAGGGCGAGTCAGACTGGCGACGTACTGTTGGGGAACGAGACTGGCGTCAGGAGGGGCGTGAAGGCCGTGAAGACAACGATCGAGAAGACCGTGACAATGAAATGCCCTTccgaagaggaggagaaagttCTCGTCGTGGTGGTTCAGATGACAGAGGACTCCGTCGTGGCTTTGATGAGGAGCGAGGTCCGCGCCGAGGAGGTGATGATGACCGTGGACCCAGACGGGGCTTTGATGATGATCGTGGGCCCAGGAGGGGCTTTGACGATGACCGAGGTCACCGAAGAGCTGATGACGACAGAGCACCAAGGCGTGGAATGGACGAAGATCGTGGTCCCAGACGAGGTGATGACGACCGTGGCCCAAGAAGAGGCTTCGATGACGACCGTGGACCTCGCAGAGGCATGGATGAACCCAGAGCGCCTCGACGTGGGGCAGATGATGACTGGGGCCCCAGAAGAGGAGGGGATGATGAGAGAGGAAGCCGCAGGGGTATGGATGACTCTGGGCCACGTCGTGGAGATGACTCCAGACCCTGGAAACCTCTTGGGAGACCAGGTGGatggagagagcgagagaaggcTCGGGAAGAAAGCTGGGGACCTCCTCGTGAAACAGGCAACGATGATGATGAGAACGAGGGAGATGATCGTCAAGAAGGAGATCGGTTTAGAGATCGTCGTCCTCCTCCCAGgGAAGAAGGGGGTGgctggagaagaggaggaggaggaggtagtggtggtggtggtggtggtgaggAGCAGAGCAGTTGGCGTGACTCTCGTCGTGAAGACTTTGACCGTGATGATCGTCGTGAACGCCGTGACGTGAGGGAACGCAGAGATGACAGAGACCGCGACCGTGATCTCAGAGCCCCCCAAAGAGACCTTGATGAAGGTGGCTCATGGCGTCGTGGTGGTGAAGAACGACGGGAAGAGCGTAAGGATGAAAGAGAGGCTCCTCCCAGACCACGTGACCGGGAGCGTGAGGGTGGCGAGAAGAGCACCTGGCGCTCTGACAAAGATAAGGAAAACCCGCGCCGGACCAAGAACGAGACGGATGATGATGGCTGGACCACTGTCCGCCGCTAATGCTAAAGcatcagagtttttttttttttttgcttgatggTGTACTAAGCCTTGATGTGTTCTCTAATCAGTACAGATCACTGCTTACATTAACATGAAATACATAAAGCTTTGCCATAGAATTACAACACTTAAAATGGGTTTTCAAACATGGCAATTTATATTTCATCCCTTTTTAAAAACTTACATTTGAAAAGTAGCTCATTCCTTTTTGTTATGCATGCTTAGGATTAAATTGGTCACGCAAAATTAagtagaagtttttttttttttttctttgaggtGCGGATGTTGTAGAACATGAACGAGTGGTGTTTTGAGATGAAATCATCAGGTTATCTTTACAGCTGTGTCCATGCTGTAGTTGCTGCTTATGCTGTGGTTGTATGCCCTctagaaatatgaaaaaaacctttattaatAAAGTCGTTTGCTCATTAAACTGAA
>XM_043255491.1
CGCAGTTCACGTGCGCTAGTCCTTTCTTGCTTGCGCGGCGAGAAGTCACGGCGCGGATGGACAGGCAGAGTCAATAAAACAGCCTCGACTATCTGAAAACTGCCTGCTAGCGAGCCATAACAATGCCAGCCTATTTCCAGAGACCGGAGAACGCTCTTAAGCGGGCAAACGAGTTTCTTGAAGTTGGTAAAAAGCAGCCAGCTTTGGATGTGCTCTACGATGTCATCAAGAGCAAAAAACATCGAACATGGCAGAAGATACACGAGCCTATCATGCTCAAGTACCTGGAGCTCTGCGTGGATCTGCGCAAGAGCCACTTGGCAAAGGAGGGACTGTATCAGTACAAAAACATCTGTCAACAGGTGAACATCAAATCTCTGGAGGATGTGGTCCGTGCTTATCTGAAACTTGCAGAGGAGAAGACTGAGACCGCAAAAGAGGAGTCTCAGCAGATGGTGCTGGACATTGAGGATCTGGACAACATTCAGACCCCAGAAAGTGTTCTGTTGAGTGCCGTTAGTGGTGAAGACACTCAAGACCGTACTGACAGACTTCTGCTCACGCCTTGGGTCAAGTTCTTGTGGGAGTCGTACCGCCAGTGCCTGGACCTGCTAAGGAATAACTCCAAAGTGGAGCGCCTTTACCATGACATTGCTCAGCAAGCATTCAAGTTTTGCCTGCAGTACACTCGTAAAGCAGAATTCCGTAAGCTGTGTGACAACCTGCGAATGCACCTGGGACAGATCCAACGGCATCACAACCAGAGCACTGCCATCAACCTGAACAATCCTGAGAGCCAGTCCATGCACCTCGAGACACGTCTGGTCCAGCTGGACAGCGCTATTAGCATGGAGCTGTGGCAGGAAGCATTCAAAGCAGTTGAAGACATCCATGGACTGTTTGCCCTCTCGAAGAAGCCCCCTAAACCCCAGCTTATGGCTAACTACTATAATAAGGTGTCCACTGTATTCTGGAAGTCTGGCAATGCCTTATTCCATGCCTGCACCCTACACAGACTCTATCACCTCTCCCGGGAAATGCGCAAGAACCTCACCCAAGAAGAGATGCAGAGgatGTCCACTCGAGTGCTGTTGGCCACTTTGTCTATTCCCATCACCCCTGAGCGCACTGATATCGCTCGGCTGTTGGACATGGATGGCATCATTGTGGAGAAACACCGTAGACTGGCTACATTACTTGGTCTTCAGTCTCCACCCACCCGCCAGAGTCTAATCAATGACATGGTGAGGTTCAACTTGCTTCAGTATGTTGTTCCTGAAGTCAAAGAGCTCTACAACTGGTTGGAGGTGGACTTCCACCCTCTTAAACTTTGTGGAAGAGTGACTAAGGTGCTGAACTGGGTGAGGGACCAAGCTGAGAAAGAATCAGACCTGCAGCAGTATGTTCCTCACTTACAGAACAACACCATCCTTCGACTGCTACAACAGGTGGCTCAGATCTACCAGAGCATCGAGTTCAGCAGATTGGCGTCTCTGGTGCCATTTGTAGATGCTTTCCAACTGGAGCGCTCAATTGTAGATGCAGCACGACACTGTGACCTACagGTGCGCATTGATCATACATCTCGAACGCTGAGTTTTGGCTCCGATCTGAACTATTCTACTAAAGAAGATTCTCCAGTAGGTCCGTTCCTACAGAACATGCCCTCTGAACAGATACGGAATCAGCTCACTGCCATGTCATCCTCCTTGGCTAAAGCCATCCAAGTCATCAAACCTGCCTCCTTAATGCAAGAACATGAAGAGCAGAGTCAACAGGCCATCACAGCCTACCTAAAGAATGCCCGCAAAGAGCATCAGCGCATCCTTGCTCGGCGACAAACCATTGAGGAACGCAAAGAGCGTCTGGAGAGCCTCAACATCCAGAGGGAGAAAGAGGAGCTGGAGCAACGGGAGGCAGAGCTACAGAAGGTGCGCAAGGCAGAGGAGGAGCGTCTTAGACAAGAGGCCAAGGAGCGAGAAAAGGAGCGCATCATGCAGGAACACGAACAAATCAAAAAGAAGACCGTGCGTGAGCGACTGGAGCAGATCAAGAAGACTGAGCTTGGAGCCAAGGCCTTCAAAGACATCGATATTGAGGATCTGGAGGAGCTGGACCCTGATTTCATCATGGCTAAACAGGTAGAACAActagaaaaagagaagaaagaactTCAGGAGCGTCTCAAAAACCAGGAAAAGAAGATCGACTACTTTGAGAGAGCCAAGCGCCTTGAGGAGATTCCTCTGATCAAGAAAGCCTACGAGGAACAGCGCATCAAAGACATGGAGTTATGGGAGCTGCAGGAGGAAGAGAGGATCAGCAATATGAAGATGGAGCGTGAGAAGGCACTGGAACACAAGCAGAGAATGTCAAGGATGATGGAGGACAAGGAGAACTTCTTGTCCAAAATTAAAGCTGCTCGAAGCTTCATTTATGAGGAAAAACTCAAGCAGTTCCAAGAACGTTTGGTCGAGGAGCGAAAGAAACGTCTTGAGGACAGAAAGAAGCAGCGTAAGGAGGACAGACGAAAGGCCTTCTATTTTCAGAAAGAAGAGGAGGCCCAGAGAATCCGTGAGGAACAGCTCAAGAAAGagcGGGAAGAGCGTGAACGCTTGGAGCAGGAGCaaagagaggaggaagagcGTGAATACCAAGAGCGCCTGCGTAAACTGGAGGAACAGGAGAGAAAACAGCGTGCCCGACAACAGGAAATTGAGGAGCGTGAACGCCGcaaggaggaggagaggagggcaCCAGAAGAAAAACCCAGCAAGGAGTGGGGTGAACGGGAAGAAGGAGGCTGGAGGAAGCGTGGTGAGGGCGAGTCAGACTGGCGACGTACTGTTGGGGAACGAGACTGGCGTCAGGAGGGGCGTGAAGGCCGTGAAGACAACGATCGAGAAGACCGTGACAATGAAATGCCCTTccgaagaggaggagaaagttCTCGTCGTGGTGGTTCAGATGACAGAGGACTCCGTCGTGGCTTTGATGAGGAGCGAGGTCCGCGCCGAGGAGGTGATGATGACCGTGGACCCAGACGGGGCTTTGATGATGATCGTGGGCCCAGGAGGGGCTTTGACGATGACCGAGGTCACCGAAGAGCTGATGACGACAGAGCACCAAGGCGTGGAATGGACGAAGATCGTGGTCCCAGACGAGGTGATGACGACCGTGGCCCAAGAAGAGGCTTCGATGACGACCGTGGACCTCGCAGAGGCATGGATGAACCCAGAGCGCCTCGACGTGGGGCAGATGATGACTGGGGCCCCAGAAGAGGAGGGGATGATGAGAGAGGAAGCCGCAGGGGTATGGATGACTCTGGGCCACGTCGTGGAGATGACTCCAGACCCTGGAAACCTCTTGGGAGACCAGGTGGatggagagagcgagagaaggcTCGGGAAGAAAGCTGGGGACCTCCTCGTGAAACAGGCAACGATGATGATGAGAACGAGGGAGATGATCGTCAAGAAGGAGATCGGTTTAGAGATCGTCGTCCTCCTCCCAGtgattgttttgtttgaaagcCTTAATAAACC

Function

symbol description
eif3s10 Predicted to enable mRNA binding activity. Predicted to contribute to translation initiation factor activity. Predicted to be involved in formation of cytoplasmic translation initiation complex and translation reinitiation. Predicted to act upstream of or within translational initiation. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex, eIF3e; eukaryotic translation initiation factor 3 complex, eIF3m; and multi-eIF complex. Orthologous to human EIF3A (eukaryotic translation initiation factor 3 subunit A).
eif3a Enables RNA binding activity. Contributes to translation initiation factor activity. Involved in IRES-dependent viral translational initiation; formation of cytoplasmic translation initiation complex; and viral translational termination-reinitiation. Located in cytosol; nucleolus; and nucleoplasm. Part of eukaryotic translation initiation factor 3 complex.

NR:

description
PREDICTED: eukaryotic translation initiation factor 3 subunit A

GO:

id name namespace
GO:0001731 formation of translation preinitiation complex biological_process
GO:0001732 formation of cytoplasmic translation initiation complex biological_process
GO:0006446 regulation of translational initiation biological_process
GO:0005852 eukaryotic translation initiation factor 3 complex cellular_component
GO:0033290 eukaryotic 48S preinitiation complex cellular_component
GO:0016282 eukaryotic 43S preinitiation complex cellular_component
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K03254 EIF3A; translation initiation factor 3 subunit A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255490.1 True 4358 mRNA 0.51 22 6873234 6885961
XM_043255491.1 False 3545 mRNA 0.52 21 6873234 6884458

Neighbor

gene id symbol gene type direction distance location
sfxn4 sfxn4,LOC107711434,LOC107733723 coding upstream 5900 6864146 ~ 6867334 (+)
tm9sf3 tm9sf3,LOC107711435,LOC107698740,LOC107666468,LOC102778527 coding upstream 12360 6849535 ~ 6860874 (+)
LOC122356807 LOC107585259,LOC107733721,LOC107733720,LOC107585260,LOC107683040 coding upstream 24991 6844732 ~ 6848243 (+)
LOC122356727 LOC107585260,LOC107585259,LOC107733721,LOC107733720,LOC107698744 coding upstream 29694 6840597 ~ 6843540 (+)
six3a six3,six3a,LOC107733790,LOC107585256,LOC107711438,LOC107666567 coding upstream 165842 6704087 ~ 6707392 (+)
emx2 emx2,LOC107666392,LOC107711418,LOC107733718,LOC107585297 coding downstream 4552 6890513 ~ 6895703 (+)
atrnl1a atrnl1a,LOC107602489,LOC107666481,LOC107711425,LOC107733678,LOC107698718 coding downstream 222717 7108678 ~ 7293308 (+)
trnag-gcc_68 NA coding downstream 245465 7131426 ~ 7131496 (+)
ccdc172 ccdc172,LOC107557969 coding downstream 479561 7365522 ~ 7471201 (+)
LOC122357079 LOC107557971,LOC107666497,LOC107555324,LOC100535494,LOC107713883,LOC107754849,LOC107696875,LOC107698713,LOC107713890 coding downstream 592073 7478034 ~ 7721812 (+)
G91529 NA non-coding upstream 11718 6815010 ~ 6861516 (+)
LOC122356144 NA non-coding upstream 117680 6723280 ~ 6755554 (+)
G91492 NA non-coding upstream 174065 6693662 ~ 6699169 (+)
G91343 NA non-coding upstream 420158 6452744 ~ 6453076 (+)
G91324 NA non-coding upstream 502706 6370210 ~ 6370528 (+)
G91545 NA non-coding downstream 56606 6942567 ~ 6942795 (+)
G91594 NA non-coding downstream 160980 7046941 ~ 7047247 (+)
G91673 NA non-coding downstream 923910 7809871 ~ 7810104 (+)
G91681 NA non-coding downstream 937321 7823282 ~ 7825341 (+)
LOC122356873 NA non-coding downstream 1222380 8108341 ~ 8111278 (+)
akt3a akt3a,akt3,LOC107587843,LOC107666464,LOC107585250,LOC107666430,LOC103024575,LOC108422057,LOC106589689 other upstream 515217 6254603 ~ 6358017 (+)
commd8 commd8,LOC107666485,LOC107556927,LOC107733703,LOC107585230 other upstream 886255 5982518 ~ 5986979 (+)
lamtor3 lamtor3 other upstream 920717 5951217 ~ 5952517 (+)
ap5s1 ap5s1,LOC107693289,LOC107678575,LOC107718444,LOC107567857,LOC107582535,LOC107733789 other upstream 1601987 5261036 ~ 5271247 (+)
rab11fip5a LOC107733767,LOC107690145,LOC107582533 other upstream 1674830 5177718 ~ 5198404 (+)
LOC122356719 LOC107585299,LOC107733725,LOC107698728,LOC107711427,LOC107666365,LOC107711426,LOC107585285,LOC107733707 other downstream 207183 7093144 ~ 7147218 (+)
sh2d4ba sh2d4ba,LOC107713884,LOC107666399,LOC107565924,LOC107743625,LOC107696870 other downstream 885599 7771560 ~ 7787307 (+)
chchd1 LOC107713887,LOC107565922,LOC107743624,LOC107696882,LOC107666381,LOC107555316 other downstream 950219 7836180 ~ 7838945 (+)
zswim8 LOC107666425,LOC107565928,LOC107713895,LOC107743573 other downstream 972737 7858698 ~ 7886690 (+)
G91833 slc37a1 other downstream 1420525 8306486 ~ 8310824 (+)

Expression


Co-expression Network