sfxn4 (sfxn4,LOC107711434,LOC107733723)


Basic Information

Item Value
gene id sfxn4
gene name sfxn4,LOC107711434,LOC107733723
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 6864146 ~ 6867334 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255495.1
TGGATAACGCCTGAGCACGTGACACGCGGAAGCGTCGCAGGCTCTCAGCAGAGCTCAAGCATGTCCCAGCGGCGTGACCTACACGATTTAATCTTGTagtatacaaaaataatgaactgGTAATGATTGTAGAGCCTTCGTTGAAAAGCTAAAATGGACCCCAACTTACAGTACTGGCAAAGCAATGGACAGTCTTTTCTGAGCAGACTGCGTCTCTGGTTCAGAATTCTTGACCCCACTTCTGTGTTGTCTTCACAGGCTGAAATTGAGCAGGCCCGGATACTTCTTCAGAATGAAGGACATGCACAAAACAAGGAAAACGTGGCTAATGCCTGGTTACTGTCtcttTCATCAGTCCATCCTGATACTGGAGGTTTAATTTCACCAGTGTTTAGTTCTCAAGtcttGCTGCCTATATCTGCTCCCGTGgTTGTTGCAAGTTTAATGCCCCATAAAGGCATTAAACCTGCATTGTTCTGGCAAtttttgCTTCAGACGTACTGTACGGGATTTACCCATGCTAACAGAAATACAACAGCAACTAAGGATAACAAAACGTCAATGAAGCAGTCCATTCTTATCGTTGGAACAGTTTCCTACTCAACCTTTGCAGGGGCTCTTCCTCAGATCATACTCAAGCGTTTTGGTGCAGCGGCTGAGACCTTCTCTAGATCCTTGTTGCCTATTCCTCTCTCAGTCTGTCTAGCAGCATTCAGTGTAATGGTGGTGAGAAGCGAAGAGGCTGATAATGGAATACGAGTGTTTGATTCGAACGGAAATGCCGTTGGAGTCTCGAAGGCAGCTGGTTCTAAGGCCATAAAGGAAACGGCTCTCTCGAGAGCGGCTCTCTTTGGCACCACCGCAGCCGTTCCCACTTTACTGCTGGCTCTTCTTAAAAGGGCAAAGTTTGTCCAAAGGAACTCAATAATAATCGCTCCTATTCGGTACATCAGTACTGCCATTACTTTTGGCTTGATGATTCCCGTGTCCTTCAGTATTTTTCCACAGTTGGGCAAGataaAGAAGGAGAATTTAGAAGAGGAGTTTCAGTCACTTGACAGTAATGGGGAACTGTTTTACCACAGAGGACTGTAACGTTGCCATTGCCAACTTTACTATTTGATGATGACTTTTATtgacactggaaaaaaaactgtatattaaaatccaggccatttcaacattttaaaaa

Function

symbol description
sfxn4 Predicted to enable transmembrane transporter activity. Acts upstream of or within cellular respiration and erythrocyte differentiation. Located in mitochondrion. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 18. Orthologous to human SFXN4 (sideroflexin 4).

NR:

description
sideroflexin-4

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0030218 erythrocyte differentiation biological_process
GO:0006812 cation transport biological_process
GO:0045333 cellular respiration biological_process
GO:0016020 membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0008324 cation transmembrane transporter activity molecular_function

KEGG:

id description
K23502 SFXN4; sideroflexin-4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255495.1 True 1192 mRNA 0.44 14 6864146 6867334

Neighbor

gene id symbol gene type direction distance location
tm9sf3 tm9sf3,LOC107711435,LOC107698740,LOC107666468,LOC102778527 coding upstream 3272 6849535 ~ 6860874 (+)
LOC122356807 LOC107585259,LOC107733721,LOC107733720,LOC107585260,LOC107683040 coding upstream 15903 6844732 ~ 6848243 (+)
LOC122356727 LOC107585260,LOC107585259,LOC107733721,LOC107733720,LOC107698744 coding upstream 20606 6840597 ~ 6843540 (+)
six3a six3,six3a,LOC107733790,LOC107585256,LOC107711438,LOC107666567 coding upstream 156754 6704087 ~ 6707392 (+)
camkmt si:ch73-54n14.2,camkmt,LOC107602502,LOC107585255,LOC107733780,LOC107698723,LOC107666367 coding upstream 209913 6561232 ~ 6654233 (+)
eif3s10 eif3s10,eif3a,LOC107666466 coding downstream 5900 6873234 ~ 6885961 (+)
emx2 emx2,LOC107666392,LOC107711418,LOC107733718,LOC107585297 coding downstream 23179 6890513 ~ 6895703 (+)
atrnl1a atrnl1a,LOC107602489,LOC107666481,LOC107711425,LOC107733678,LOC107698718 coding downstream 241344 7108678 ~ 7293308 (+)
trnag-gcc_68 NA coding downstream 264092 7131426 ~ 7131496 (+)
ccdc172 ccdc172,LOC107557969 coding downstream 498188 7365522 ~ 7471201 (+)
G91529 NA non-coding upstream 2630 6815010 ~ 6861516 (+)
LOC122356144 NA non-coding upstream 108592 6723280 ~ 6755554 (+)
G91492 NA non-coding upstream 164977 6693662 ~ 6699169 (+)
G91343 NA non-coding upstream 411070 6452744 ~ 6453076 (+)
G91324 NA non-coding upstream 493618 6370210 ~ 6370528 (+)
G91545 NA non-coding downstream 75233 6942567 ~ 6942795 (+)
G91594 NA non-coding downstream 179607 7046941 ~ 7047247 (+)
G91673 NA non-coding downstream 942537 7809871 ~ 7810104 (+)
G91681 NA non-coding downstream 955948 7823282 ~ 7825341 (+)
LOC122356873 NA non-coding downstream 1241007 8108341 ~ 8111278 (+)
akt3a akt3a,akt3,LOC107587843,LOC107666464,LOC107585250,LOC107666430,LOC103024575,LOC108422057,LOC106589689 other upstream 506129 6254603 ~ 6358017 (+)
commd8 commd8,LOC107666485,LOC107556927,LOC107733703,LOC107585230 other upstream 877167 5982518 ~ 5986979 (+)
lamtor3 lamtor3 other upstream 911629 5951217 ~ 5952517 (+)
ap5s1 ap5s1,LOC107693289,LOC107678575,LOC107718444,LOC107567857,LOC107582535,LOC107733789 other upstream 1592899 5261036 ~ 5271247 (+)
rab11fip5a LOC107733767,LOC107690145,LOC107582533 other upstream 1665742 5177718 ~ 5198404 (+)
LOC122356719 LOC107585299,LOC107733725,LOC107698728,LOC107711427,LOC107666365,LOC107711426,LOC107585285,LOC107733707 other downstream 225810 7093144 ~ 7147218 (+)
sh2d4ba sh2d4ba,LOC107713884,LOC107666399,LOC107565924,LOC107743625,LOC107696870 other downstream 904226 7771560 ~ 7787307 (+)
chchd1 LOC107713887,LOC107565922,LOC107743624,LOC107696882,LOC107666381,LOC107555316 other downstream 968846 7836180 ~ 7838945 (+)
zswim8 LOC107666425,LOC107565928,LOC107713895,LOC107743573 other downstream 991364 7858698 ~ 7886690 (+)
G91833 slc37a1 other downstream 1439152 8306486 ~ 8310824 (+)

Expression


Co-expression Network