eef1a1a (eef1a1a,LOC107693767,LOC107716315,LOC107588677,LOC107718831,LOC107673933,LOC108258313,LOC107585334)


Basic Information

Item Value
gene id eef1a1a
gene name eef1a1a,LOC107693767,LOC107716315,LOC107588677,LOC107718831,LOC107673933,LOC108258313,LOC107585334
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24846449 ~ 24851300 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255511.1
GTCGCAGCAGTCTGCGTGCACGTGACACGTTTCAAGCTAAACGtgttaataaactatttaacCAGTTCTTTACGATAGCAGTGTGACCTCAAGCATCCTTGGTGACTGGTGTAGTGTCTGCGCATGCACAGTCGCTTCCGTCGTGTCTGTATTATAACAGGATCAGACGCGCCGCTCAGTCTCTTCAGCACCGTTCCAGTATCCCGAGCACACGCGCAGCCGTCAGCCATGGGAAAGGAGAAGCTCCACATCAACATTGTGGTCATCGGCCATGTGGACTCTGGCAAATCCACTACCACCGGCCACCTCATCTACAAGTGTGGTGGGATTGACAAGCGAACGATCGAGAAGTTTGAGAAAGAGGCTGCAGAGATGGGAAAGGGCTCTTTCAAGTATGCCTGGGTTCTGGACAAGCttaaagcagaaagagagagaggaatcaCCATCGATATCTCCCTGTGGAAGTTTGAGACCAGCAAATACTATGTCACCATCATTGATGCTCCAGGACACAGGGACTTCATCAAAAACATGATCACCGGAACCTCACAGGCAGACTGTGCCGTTCTGATTGTGGCGGCAGGTGTCGGAGAGTTTGAGGCTGGCATCTCGAAGAACGGCCAGACCAGAGAGCATGCTCTTCTGGCCTACACATTGGGTGTGAAGCAGCTGATTGTGGGTGTCAACAAGATGGATTCCACTGAACCCAGTTACAGCCAGAAGCGTTATGAGGAAATAGTGAAGGAAGTCAGCACCTACATCAAGAAGATCGGCTATAATCCTGACACGGTGGCATTTGTGCCCATCTCTGGCTGGAATGGAGATAACATGCTCGAGGCCAGTCCTAATATGACTTGGTTCAAAGGTTGGAAGATTACCCGGAAAGAAGGGAACGCATCCGGGACCACCCTACTGGAGGCTCTGGATGCCATTCAGCCCCCAACACGTCCAACTGACAAACCCCTCCGCCTGCCTCTTCAGGACGTCTACAAGATTGGAGGAATTGGAACTGTTCCCGTGGGCCGTGTAGAGACTGGAATTTTGAAGCCAGGTATGGTGGTGACCTTTGCCCCTGTCAACGTGACAACTGAAGTCAAGTCAGTGGAGATGCATCACGAGGCTCTTTCAGAGGCCTTGCCCGGCGACAACGTTGGCTTTAATGTTAAGAACGTCTCCGTCAAGGACATCCGTCGTGGTAATGTCACCGGAGACAGCAAAAACGATCCACCTCAGGAGGCCGCCACCTTTACTGCTCAAGTGATCATCTTGAACCACCCAGGGCAGATCAGCGCTGGCTATGCCCCTGTTCTGGATTGCCACACTGCACATATCGCCTGCAAGTTTGCAGAGCTGAAGGAGAAGATTGATCGTCGATCTGGGAAGAAGCTTGAGGACAATCCCAAGAGCCTCAAATCAGGAGATGCTGCAATCGTCGATATGATCCCCGGGAAGCCCATGTGTGTGGAGAGCTTTTCAGAGTATCCTCCTCTGGGTCGTTTTGCTGTGCGTGACATGCGTCAAACCGTCGCAGTGGGAGTGATAAAAGGAGTGGAGAAAAAGACCCCGACGAGTGGAAAGATCACCAAATCTGCTCAGAAAGCCCAGAAGGCCAAATGAATGTTGTGTTTGACTGCCAACTCCAGAGACACATATGGAAAAGCAGAGGTCATCCAGCTCTTCTATCCTATTGGCTGCTTAGGTTCTATAGTCAGAGACTGCTTAATAGTTCCAATGCATCGCAAAAGtatcagaaggaaaaaaattactaaCAAAAGCAGTCCTTTAGATAACTCCAATTTGTATGTTGACTCGTACTGTAAGTCTTACATCCAAACCATTGAACttatttaatagtgtttttaatAGTTGTGCTTTTCTCTTCGATGATAGCTGTTGAAACcatatgtgatttttaaaatcttgacAGGTTTGACCTCTCCTGCTCTGGAGTGCAGTTTTAGCCTGGTTCTCATAATGTTGTCTTCGCTTGTTTTAGTGCTTGTTTGCAAAATACCATGTGTTCAGTATCCACTGGTGGTGAGCTACTTAAACGACACTATTTAGTAGACATTGAGAACCTTTATGTTTAGCTTTGCAGAACAATGAAAACCTAAAATGAAGCTCTTAATCAGCCCATCTCTGGGCTCATGCAATCTTTGGTGCACTGACAGCTTTATGTTTAGCACTTTGACTGGCGTAGGCTAACCCTGCACAAGCACTTGTTGACTTTAATTGGCATTAGCTACAGCAccttattataaaaaacaaaagctttcatGTCATATTAAAGAAGTCTCAAccataa
>XM_043255512.1
CAGTTCTTTACGATAGCAGTGTGACCTCAAGCATCCTTGGTGACTGGTGTAGTGTCTGCGCATGCACAGTCGCTTCCGTCGTGTCTGTATTATAACAGGATCAGACGCGCCGCTCAGTCTCTTCAGCACCGTTCCAGTATCCCGAGCACACGCGCAGCCTTACAGTTACATTGGCACTTTAATTAAAGCCGTCAGCCATGGGAAAGGAGAAGCTCCACATCAACATTGTGGTCATCGGCCATGTGGACTCTGGCAAATCCACTACCACCGGCCACCTCATCTACAAGTGTGGTGGGATTGACAAGCGAACGATCGAGAAGTTTGAGAAAGAGGCTGCAGAGATGGGAAAGGGCTCTTTCAAGTATGCCTGGGTTCTGGACAAGCttaaagcagaaagagagagaggaatcaCCATCGATATCTCCCTGTGGAAGTTTGAGACCAGCAAATACTATGTCACCATCATTGATGCTCCAGGACACAGGGACTTCATCAAAAACATGATCACCGGAACCTCACAGGCAGACTGTGCCGTTCTGATTGTGGCGGCAGGTGTCGGAGAGTTTGAGGCTGGCATCTCGAAGAACGGCCAGACCAGAGAGCATGCTCTTCTGGCCTACACATTGGGTGTGAAGCAGCTGATTGTGGGTGTCAACAAGATGGATTCCACTGAACCCAGTTACAGCCAGAAGCGTTATGAGGAAATAGTGAAGGAAGTCAGCACCTACATCAAGAAGATCGGCTATAATCCTGACACGGTGGCATTTGTGCCCATCTCTGGCTGGAATGGAGATAACATGCTCGAGGCCAGTCCTAATATGACTTGGTTCAAAGGTTGGAAGATTACCCGGAAAGAAGGGAACGCATCCGGGACCACCCTACTGGAGGCTCTGGATGCCATTCAGCCCCCAACACGTCCAACTGACAAACCCCTCCGCCTGCCTCTTCAGGACGTCTACAAGATTGGAGGAATTGGAACTGTTCCCGTGGGCCGTGTAGAGACTGGAATTTTGAAGCCAGGTATGGTGGTGACCTTTGCCCCTGTCAACGTGACAACTGAAGTCAAGTCAGTGGAGATGCATCACGAGGCTCTTTCAGAGGCCTTGCCCGGCGACAACGTTGGCTTTAATGTTAAGAACGTCTCCGTCAAGGACATCCGTCGTGGTAATGTCACCGGAGACAGCAAAAACGATCCACCTCAGGAGGCCGCCACCTTTACTGCTCAAGTGATCATCTTGAACCACCCAGGGCAGATCAGCGCTGGCTATGCCCCTGTTCTGGATTGCCACACTGCACATATCGCCTGCAAGTTTGCAGAGCTGAAGGAGAAGATTGATCGTCGATCTGGGAAGAAGCTTGAGGACAATCCCAAGAGCCTCAAATCAGGAGATGCTGCAATCGTCGATATGATCCCCGGGAAGCCCATGTGTGTGGAGAGCTTTTCAGAGTATCCTCCTCTGGGTCGTTTTGCTGTGCGTGACATGCGTCAAACCGTCGCAGTGGGAGTGATAAAAGGAGTGGAGAAAAAGACCCCGACGAGTGGAAAGATCACCAAATCTGCTCAGAAAGCCCAGAAGGCCAAATGAATGTTGTGTTTGACTGCCAACTCCAGAGACACATATGGAAAAGCAGAGGTCATCCAGCTCTTCTATCCTATTGGCTGCTTAGGTTCTATAGTCAGAGACTGCTTAATAGTTCCAATGCATCGCAAAAGtatcagaaggaaaaaaattactaaCAAAAGCAGTCCTTTAGATAACTCCAATTTGTATGTTGACTCGTACTGTAAGTCTTACATCCAAACCATTGAACttatttaatagtgtttttaatAGTTGTGCTTTTCTCTTCGATGATAGCTGTTGAAACcatatgtgatttttaaaatcttgacAGGTTTGACCTCTCCTGCTCTGGAGTGCAGTTTTAGCCTGGTTCTCATAATGTTGTCTTCGCTTGTTTTAGTGCTTGTTTGCAAAATACCATGTGTTCAGTATCCACTGGTGGTGAGCTACTTAAACGACACTATTTAGTAGACATTGAGAACCTTTATGTTTAGCTTTGCAGAACAATGAAAACCTAAAATGAAGCTCTTAATCAGCCCATCTCTGGGCTCATGCAATCTTTGGTGCACTGACAGCTTTATGTTTAGCACTTTGACTGGCGTAGGCTAACCCTGCACAAGCACTTGTTGACTTTAATTGGCATTAGCTACAGCAccttattataaaaaacaaaagctttcatGTCATATTAAAGAAGTCTCAAccataa
>XM_043255513.1
TGACCTCAAGCATCCTTGGTGACTGGTGTAGTGTCTGCGCATGCACAGTCGCTTCCGTCGTGTCTGTATTATAACAGGATCAGACGCGCCGCTCAGTCTCTTCAGCACCGTTCCAGTATCCCGAGCACACGCGCAGAATTTGCGCCATGACAGTTTGCTGTCTGTGTAAAGCCTTACAGTTACATTGGCACTTTAATTAAAGCCGTCAGCCATGGGAAAGGAGAAGCTCCACATCAACATTGTGGTCATCGGCCATGTGGACTCTGGCAAATCCACTACCACCGGCCACCTCATCTACAAGTGTGGTGGGATTGACAAGCGAACGATCGAGAAGTTTGAGAAAGAGGCTGCAGAGATGGGAAAGGGCTCTTTCAAGTATGCCTGGGTTCTGGACAAGCttaaagcagaaagagagagaggaatcaCCATCGATATCTCCCTGTGGAAGTTTGAGACCAGCAAATACTATGTCACCATCATTGATGCTCCAGGACACAGGGACTTCATCAAAAACATGATCACCGGAACCTCACAGGCAGACTGTGCCGTTCTGATTGTGGCGGCAGGTGTCGGAGAGTTTGAGGCTGGCATCTCGAAGAACGGCCAGACCAGAGAGCATGCTCTTCTGGCCTACACATTGGGTGTGAAGCAGCTGATTGTGGGTGTCAACAAGATGGATTCCACTGAACCCAGTTACAGCCAGAAGCGTTATGAGGAAATAGTGAAGGAAGTCAGCACCTACATCAAGAAGATCGGCTATAATCCTGACACGGTGGCATTTGTGCCCATCTCTGGCTGGAATGGAGATAACATGCTCGAGGCCAGTCCTAATATGACTTGGTTCAAAGGTTGGAAGATTACCCGGAAAGAAGGGAACGCATCCGGGACCACCCTACTGGAGGCTCTGGATGCCATTCAGCCCCCAACACGTCCAACTGACAAACCCCTCCGCCTGCCTCTTCAGGACGTCTACAAGATTGGAGGAATTGGAACTGTTCCCGTGGGCCGTGTAGAGACTGGAATTTTGAAGCCAGGTATGGTGGTGACCTTTGCCCCTGTCAACGTGACAACTGAAGTCAAGTCAGTGGAGATGCATCACGAGGCTCTTTCAGAGGCCTTGCCCGGCGACAACGTTGGCTTTAATGTTAAGAACGTCTCCGTCAAGGACATCCGTCGTGGTAATGTCACCGGAGACAGCAAAAACGATCCACCTCAGGAGGCCGCCACCTTTACTGCTCAAGTGATCATCTTGAACCACCCAGGGCAGATCAGCGCTGGCTATGCCCCTGTTCTGGATTGCCACACTGCACATATCGCCTGCAAGTTTGCAGAGCTGAAGGAGAAGATTGATCGTCGATCTGGGAAGAAGCTTGAGGACAATCCCAAGAGCCTCAAATCAGGAGATGCTGCAATCGTCGATATGATCCCCGGGAAGCCCATGTGTGTGGAGAGCTTTTCAGAGTATCCTCCTCTGGGTCGTTTTGCTGTGCGTGACATGCGTCAAACCGTCGCAGTGGGAGTGATAAAAGGAGTGGAGAAAAAGACCCCGACGAGTGGAAAGATCACCAAATCTGCTCAGAAAGCCCAGAAGGCCAAATGAATGTTGTGTTTGACTGCCAACTCCAGAGACACATATGGAAAAGCAGAGGTCATCCAGCTCTTCTATCCTATTGGCTGCTTAGGTTCTATAGTCAGAGACTGCTTAATAGTTCCAATGCATCGCAAAAGtatcagaaggaaaaaaattactaaCAAAAGCAGTCCTTTAGATAACTCCAATTTGTATGTTGACTCGTACTGTAAGTCTTACATCCAAACCATTGAACttatttaatagtgtttttaatAGTTGTGCTTTTCTCTTCGATGATAGCTGTTGAAACcatatgtgatttttaaaatcttgacAGGTTTGACCTCTCCTGCTCTGGAGTGCAGTTTTAGCCTGGTTCTCATAATGTTGTCTTCGCTTGTTTTAGTGCTTGTTTGCAAAATACCATGTGTTCAGTATCCACTGGTGGTGAGCTACTTAAACGACACTATTTAGTAGACATTGAGAACCTTTATGTTTAGCTTTGCAGAACAATGAAAACCTAAAATGAAGCTCTTAATCAGCCCATCTCTGGGCTCATGCAATCTTTGGTGCACTGACAGCTTTATGTTTAGCACTTTGACTGGCGTAGGCTAACCCTGCACAAGCACTTGTTGACTTTAATTGGCATTAGCTACAGCAccttattataaaaaacaaaagctttcatGTCATATTAAAGAAGTCTCAAccataa

Function

symbol description
eef1a1a Predicted to enable GTPase activity and translation elongation factor activity. Acts upstream of or within heart development. Is expressed in asteriscus; brain; liver; muscle; and pleuroperitoneal region. Orthologous to several human genes including EEF1A1 (eukaryotic translation elongation factor 1 alpha 1).

NR:

description
elongation factor 1-alpha, somatic form

GO:

id name namespace
GO:0006414 translational elongation biological_process
GO:0005737 cytoplasm cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0003746 translation elongation factor activity molecular_function

KEGG:

id description
K03231 EEF1A; elongation factor 1-alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255511.1 True 2305 mRNA 0.47 8 24846449 24851300
XM_043255512.1 False 2274 mRNA 0.47 8 24846449 24851238
XM_043255513.1 False 2288 mRNA 0.47 8 24846449 24851217

Neighbor

gene id symbol gene type direction distance location
cgasa NA coding downstream 814 24842270 ~ 24845635 (-)
asrgl1 asrgl1,LOC107695955,LOC107585330,LOC107673965,LOC105911569,LOC103032358,LOC108442615 coding downstream 174115 24667305 ~ 24672334 (-)
b3gat2 b3gat2,LOC107718837,LOC107694338,LOC107673925,LOC107588666,LOC107585329,LOC107716319 coding downstream 226016 24603688 ~ 24620433 (-)
slc2a15a slc2a15a,LOC107716293,LOC107673883,LOC107708408,LOC107696166,LOC107585370,LOC107588743,LOC108442702 coding downstream 405116 24430020 ~ 24441333 (-)
fbxw4 fbxw4,LOC107707737,LOC107716323,LOC107673945,LOC107694796,LOC107588663,LOC107585327 coding downstream 452562 24367927 ~ 24393887 (-)
slc17a5 slc17a5,LOC107588676,LOC107673875,LOC107585335,LOC107693696,LOC107718830 coding upstream 103 24851403 ~ 24856234 (-)
rin2a LOC107585336,LOC107716314,LOC107588678,LOC107718829 coding upstream 5919 24857219 ~ 24887322 (-)
si:dkey-187a12.4 si:dkey-187a12.4,LOC107718844,LOC107695884,LOC107588745,LOC107716288,LOC107673937,LOC107585337 coding upstream 36815 24888115 ~ 24890861 (-)
slc24a3 slc24a3,LOC107718828,LOC107693448,LOC107673935,LOC107716313 coding upstream 40653 24891953 ~ 24951267 (-)
soul2 LOC107695801,LOC107718843,LOC107588746,LOC107716303,LOC107585342,LOC107673856 coding upstream 113554 24964854 ~ 24966345 (-)
G96436 NA non-coding downstream 129487 24714219 ~ 24716962 (-)
G96435 rims1,LOC107588670,LOC107718836 non-coding downstream 132991 24710744 ~ 24713458 (-)
G96415 NA non-coding downstream 170503 24630553 ~ 24675946 (-)
LOC122357044 NA non-coding downstream 181524 24652927 ~ 24664925 (-)
G96411 NA non-coding downstream 240073 24606130 ~ 24606376 (-)
fgf8a fgf8a,LOC107673879,LOC107585369,LOC107696243,LOC107588741,LOC107716294 other downstream 441734 24399123 ~ 24404715 (-)
borcs7 borcs7,LOC107695248,LOC107585367,LOC107588662,LOC107716326 other downstream 501792 24342749 ~ 24344657 (-)
si:ch211-130h14.4 LOC107660236 other downstream 1402386 23429646 ~ 23444063 (-)
G96053 NA other downstream 1850850 22994037 ~ 22995599 (-)
G96036 mios,LOC107688218,LOC107592123,LOC107592481,LOC107671474 other downstream 2023190 22821981 ~ 22823259 (-)

Expression


Co-expression Network