antxr1d (antxr1d,LOC107673963,LOC107708254,LOC107668779,LOC107588727,LOC107757100,LOC107548602,LOC108263270)


Basic Information

Item Value
gene id antxr1d
gene name antxr1d,LOC107673963,LOC107708254,LOC107668779,LOC107588727,LOC107757100,LOC107548602,LOC108263270
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 11486772 ~ 11507939 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255618.1
GTCCGGTCTGTGGTCGCTCCTCCAAACATTTCTCCTTGAGGAGGAGCTTTCAGTGTTTTGGAAGCGGACTCAGATGACTGCGGGATATAACACTGTGACAAGGCATTCAGATATCTTTTGTGAGGAATAAATTTCATGGAAAAGAGTTGCTTTCCTTCTCTGCAGGAGtaatatgaaatgcaattttatcCCAGTGCTTTTGGAGAGAATAAACTGATGAAATGGCACGCTCACTGATTCTGAGTCTTGTTGTGggtattttagttattttggtgTCCAGTCTTCATAGTGGAGAAGCTGAGCCTTATTTTGAGGAAGAGAAGAGGTCTTGTCAAGGTGCTTTCGACTTGTATTTTGTCCTCGACAAATCAGGAAGCGTAAAAGACCACTGGGTTGAAATTTACTCCTTTGTAGAGCATCTTGCAGAGAAATTCATAAGCCCTATGTTACGGATGTCCTTCATAGTCTTCTCAACTCACGGAACAACGATTATGAAGCTCACCGAGAACAGAAATGAAATTACCAGAGgcttaaatattttgaagagaGAAATACCAGGAGGTGATACATATATGAATCTTGGAATAAAGCAGGCAAATGAGCAAATATATCATGGAAATTATGGGACAGCCAGTGTGATCATAGCACTGACGGATGGGGAGCTAAGCGACTTTCAGTTTGTCACAGCACAACAAGAGGCACAGAGAGCTCGGACATTGGGAGCCATCGTGTACTGTGTGGGTGTGAAAGACTTTAATCAGACACAGCTAGCCACAATTGCAGACACCATAGAGCATGTGTTCCCTGTAATTGGTGGATTCCAGGCCCTTGAAGGAATGATAGACTCTATCATAAAGAAATCATGCATTGAGATTTTAGCAGCTGAGCCGTCAAGTGTATGTGCTGGTGATTCTTTCCAAGTGGTTGTGAGAGGAAATGGGTTTTTGCATGCCAGAAACATCGATCAGGTTCTGTGCAGCTTCAGAGTGAATGACACAGCTACACTGAATGAAAGACCTGTCAGTGTTGAAGATACGCTCCTTCTTTGCCCCGCACCAATCATAAATGAGGCTGGAAAggTGATATATCTGCAGGTTAGCATGAATGAGGGTTTGTCCTACATCACAAGCTCAGTGCACATCACCACTGCTGAATGTTATGATGGGACCATCCTGCTCATCTCTTTACTggctgtttttctgttgttgggACTGGTGCTGATGTGGTGGTTCTGGCCTCTATGTTGTACAGTGgtCATCAAGGAAGTGCCTCCACCCCCTCTCCCTGAGCCTGAGTCTGATGATGAAGATGGCATGCCCAAAAAGAAATGGCCTACAGTGGACGCATCCTACTATGGAGGAAGAGGAGTCGGTGGAATCAAAAGAATGGAGGTGCGTTGGGGGAACAAGGGCTCTACAGAGGAAggagctaaactggaaaagccaAAGAACGCTGTAGTGAAAATGCCTGAAGACGAATATGAGCCTTATGAACCCAAACTCAGAAATCCTTATGGGCGCAGACCAGCCCATCACAGAAAGTGGTACAGTCCTATTCAGGGGAAACTGGATGCTTTGTGGGCGCTTTTTCGTCGAGGATACGATCAAGTGTCACTCATGAGACCTCAGCCCGGGGATCAGGGGCGATGCATCAACTTTACCCGGGTGAAAGCAGAGGAGTCAAGGTCACCGCCACGCAGCAACTGTCCACTTCCACCTCCACCGCCCCCTCCAGACCATCAGCCTCTCATGCGACCTGCGCCCAAAAGACCACCATCCCGGGGACCCTCCATCAACCGCCCACCCCCAGGACCTCCACCAGCCCGGGCAGCCCCGGGCCCCCGAGGACCCCCTCCTTCACGACCTCCACCCTGCCCTGGGAACAGGCACTGAGAACAATGGAGGGCCTTCACTGCTACCCTAAAATCTCTGCCTTTAATTCAGATTTGTTAAATTTGCCAAAGCCACTGGTTTCCCACAGTTTTAGAaagatgaatttgtttatttagagtGAATGAAATGTGATTTGTTCTTATTATAAACACTGGCATTGTAAGAGGGACTGCAGTAATGAATGACATTATTACGCGTGCAAATGAATGGTTTTTAGGCACTTAAAAGCTTTGAATGTTGACTTTGGGTATTTGTATATCAAATTTTGCATGACGTTAATGTGTCAGTAGGTTAGAGCTAAAGTGAGTTTGGTATACGTTATATGTCGGTTATAATTTGTATCATAATATTATTTGGTCACATCTTTAAAAGGAAAATCAGACGTGTTGTGACTGCAGGGCAGTACAAACCACTAATTTATTAAGCCTTAGGTTCCTGGCAGGCACTTGAATATAAAATGACAGGGTGTCTACCACTGGTACTGGACACTCAGCatgatattttatgtaatatatattgtattctGCTTTATGGATCATGGTAATTATTAGTAGTCCTATAAAGCAggaaattattaatgttataatatGTTAATAGTTTGGACTTAATGGAAATCCCATTGCCTTATTTCTGCTCTGTTGATATGAGAAAGAGAACAACATTATAACCATTCTATATAAATGTCCAAAAGcaagatataataataaagttttttgttcTAAAACCGAACTTTAgtttaacagtgtgtgtgtgtgtgtatatatatatatatatatatatatatatatatatatatacataaataaaaaatcatgaacacaaatatttttcattgatGAAGCCaagatttttctttattgcaTCATTTTCTTCTGAACCTTCAGCATGATTGtctttgtgtattattattgtttagtttttgatatcagacattttatttacctACTGTAAAAGTAACAAACACTTGACATGCAAATATGaatctacacaaaaaaaaatatataaatcccTAATAATGcttatcaaaatgtaataaaaataataacttca

Function

symbol description
antxr1d Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in toxin transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cell surface and plasma membrane. Human ortholog(s) of this gene implicated in GAPO syndrome and colorectal carcinoma. Orthologous to human ANTXR1 (ANTXR cell adhesion molecule 1).

NR:

description
PREDICTED: anthrax toxin receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255618.1 True 2942 mRNA 0.41 18 11486772 11507939

Neighbor

gene id symbol gene type direction distance location
gdf10a gdf10a,LOC107708281,LOC107668782,LOC107588730,LOC107673887,LOC107757113 coding upstream 5776 11477208 ~ 11480996 (+)
ptpn20 ptpn20,LOC107707196,LOC107668813,LOC107673913,LOC107757144,LOC107588696 coding upstream 32061 11426414 ~ 11454711 (+)
si:ch211-223a10.1 si:ch211-223a10.1,LOC107707219,LOC107757147,LOC107673964,LOC107548634,LOC107588731 coding upstream 98579 11379144 ~ 11388193 (+)
lrrc18a NA coding upstream 131568 11351972 ~ 11355204 (+)
vstm4a vstm4a,LOC107588614,LOC107707245,LOC107673948,LOC107548636,LOC107668767 coding upstream 149344 11329277 ~ 11337428 (+)
mettl18 mettl18,LOC107707167,LOC107588607,LOC107668810,LOC107548629,LOC107673950 coding downstream 23916 11531855 ~ 11533395 (+)
tdrd9 tdrd9 coding downstream 33183 11541122 ~ 11557216 (+)
pcnx4 pcnx4,pcnxl4,LOC107707124,LOC107757138,LOC107588690 coding downstream 86226 11594165 ~ 11602678 (+)
ppm1aa ppm1aa,LOC107707101,LOC107588600,LOC107757136,LOC107548624,LOC107673900 coding downstream 98993 11606932 ~ 11621476 (+)
six6a six6a,LOC107588601,LOC107707115,LOC107668781,LOC107743981,LOC107673886,LOC107548626 coding downstream 127716 11635655 ~ 11637883 (+)
G92923 NA non-coding upstream 24656 11414223 ~ 11462116 (+)
G92907 wdfy4,LOC107707224,LOC107757102,LOC107673934 non-coding upstream 117865 11368266 ~ 11368907 (+)
G92767 NA non-coding upstream 283088 11202654 ~ 11203684 (+)
LOC122356274 NA non-coding upstream 464716 11004910 ~ 11022056 (+)
G92748 NA non-coding upstream 502127 10984238 ~ 10984645 (+)
G92952 NA non-coding downstream 1299 11509238 ~ 11509888 (+)
G92958 NA non-coding downstream 6538 11514477 ~ 11533930 (+)
G92962 rrp12 non-coding downstream 10681 11518620 ~ 11519343 (+)
G92965 NA non-coding downstream 17418 11525357 ~ 11529080 (+)
G92968 NA non-coding downstream 35114 11543053 ~ 11558240 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other upstream 73257 11389385 ~ 11413515 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other upstream 224152 11255594 ~ 11262620 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other upstream 268597 11213526 ~ 11218175 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other upstream 517858 10964855 ~ 10968914 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other upstream 1066346 10416240 ~ 10420426 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other downstream 63721 11571660 ~ 11592600 (+)
G92977 dhrs7,LOC107588602,LOC107548599,LOC107757139 other downstream 95758 11603697 ~ 11604852 (+)
LOC122357045 LOC107654926,LOC107705370,LOC107588681,LOC107675516 other downstream 923980 12431919 ~ 12436643 (+)
jag2a jag2a,LOC107654986,LOC107675567,LOC107724379,LOC107585503,LOC107705348,LOC107600569 other downstream 994446 12502385 ~ 12535071 (+)
G93296 rrbp1 other downstream 1063692 12571631 ~ 12575212 (+)

Expression


Co-expression Network