rgs17 (rgs17,LOC107552952,LOC107743539,LOC107666476,LOC107676609,LOC107601843,LOC107725462)


Basic Information

Item Value
gene id rgs17
gene name rgs17,LOC107552952,LOC107743539,LOC107666476,LOC107676609,LOC107601843,LOC107725462
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8683957 ~ 8701125 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255627.1
CCTGTCCGCAGCTCGCCTCGCGCTCCGTGAGCTGACAGCTCCGCCGCGCATGCGCAGGGCGTCTCCACTGGCTCGCTCGGTGCTGAAGTTGGGCGGATGGACGGAAAACACCGCTGATGGAGATAAAACGGCAGCATGCAATCTCAACGCGTGATACCCCCGATATCCGCATAAACACGTGTAACGACACCCTTTTAGAAGACTGACATCTAGAACGAAAGGGATGTCTTATCCTGGATCATTTAGCCCTTGACTCAAGGAAAGGGTGTGCCTGCAAATACCAGGTGTTTGAAACCTACCTCCACCCACCTCCTGCGTTCTCCATCAGGCATGATAAGAGAAGATACAAGAGGCCACGTTTTGTTTTCCAGCACTCTGCCCGTCTCAACGTTTGACATTACAGTCATGATTTTCTTACCTGATCTTCGGATGGATTGCTGCTAATTTGCATGCCTCAGAGTGTGAGCGGAGTTGAAATGAGGAAAAGGCAGCAGGGACGCATTGAAGGACCCCCACAGGCGCCTGGTCACCCGAGGCCCAACACCTGCTGTCTGTGTTGGTGTGGATGCTGCAAATGCCTCTGGAATGAAGACAGAAGGGAACGTTCAGAGAGACAAACATGTACAAAGATGGATAGCATAGAAGCAACAGAGGAACAGCATCCCACACTGGATGAGGTGATTGCCTGGTCACGGAGCTTTGAGATGATGATGCGCTCTCCAGAGGGGAGGGATGTTTTCCGGGAGTTCTTGCGGTCTGAGTACAGCGAAGAAAACCTGATGTTCTGGATCGCCTGTGAGGAGCTAAAGAAAGAAACCAACCCATCAGCTATCGATGAAAAAGCCAGGATCATTTATGAAGACTACGTCTCCATTCTTTCGCCAAAAGAGGTCAGCTTGGATTCACGGGTGAGGGAAGGCATCAACCAAAGCCTGGCAGAACCCAGCAGTACGATGTATGAGGATGCCCAGCTTCAGATCTACACCCTCATGCACAGAGACTCCTTCCCCCGATTTCTCAACTCATCTGTTTACAGGGATCTCCTTAACAGCAAGAGGGCCTGCTTAGACACCTAGGTTTCGGCAAGAACATTTGTGACAAAAAAGCCCCAAGGTGCCACTTTCAAAAGGTGTGATGTTTCTTATTTCAAGAGTGAGTAGTTAAGCAATTCTGAGCATCCACTAGTGATCCTGAAGTTCAGTTCTGTTTAAGTGCCAATACGAGCTGCTCAGGCAACTGTGACACaggaaaaaaacgaaacaaaaaacgTGTAGGAAATCTGACAGATCCATACTTCCTACTTTCAACTCACTTGTCTTTTTCATTCACCTGTTTGGTCTCTCAAAtctcctctctcttcctgtttACCTCAcctgttctctttctctctgtgttcttTCTACCTGATCCTTTTCATCGTTTATGCCTCGCATATCTGAGGACAGCtgaataatgttattattactattattaaacttttttttttttttttttttcatttttaaagaaaatcaaaaaacaacGGATAAGCGGTAGATGTTAAGCTAGAAAACCTTTGCATGATACAAGGTTATGGAATTTACTCCAGTTTGACATTTAAGCCCCggactacaatttttttttttttttttttggtttttgtttggttttttaaataaaaaaaaaatgttttttaatgctgtCATGGGGAGAGAACATTGTAAAGCTCTCGTAAGCGAAGGGAAAATTAGCTGTGCCAATTGTTTTGTAAAAGAGACGCTGGGAAGCGTAATCGCCGTCTTGCCGTCCAAACTCTTTCTTTGCGTGTCGACAGTTCTTTAACTGGGAAACATAAGGGCTAGCTAGTGTTGTGATTGGGCAGCTAAATGAATCATgaacatttctttctctctgcaaAAATCACAATGCCTCGACACTGAGTAAGGGCACAAAAGCTGCTGATGTTGGTGACGCCACAGTTTATTTTGTGAGTCCTCCTAGCCCCTCCCAGTCCGTTACTAACAGAGAGAAGCACAGGTACTGTATGTCATGGGCTGTAAGCTTCGCTGGATTGAGCGAGAATTGCTTGAAAATCACTCACCTACATTCTGGAGGTTCTTAAAAGAGCTTCGAATTGTCTTACacattaaagaaatgtattttattaaacaaaagtgTAGTTAAACAACACTATGCCTTGTTTTTGAGAGTTACACTaggtctatttaaaataactgtgatCGCCGTGAGACCTGCTCGATGTGGTGGCGCGACGGAGTCGGATCCATCAGGGAAACTTTTCTCTGCCTCCGAGTCCGAATGTGCGTTTTTGCCTCAAACGAGGAGCGGTCATTTTCACAGCTCGGAAAACCGCAGGTTAtcgagaaaaaaacaaacaaacaaacaaacaaaaaaaagcaagtcagtcttttttataaaacttttttccaGCATGCGTTTCTTCTGTTGTGTCATGTACACATTGCAATACTCAACCCAGATACGGTGCGAACCTCTCCGGAAAGCGTCACGATCATCAAGATGATACTTACAAAAGATGATTTTCCTTTCGAGGTTTAGACGTGTGTCCCTCAAGAACGTGTGTCGTTGCATTCAGACTTGAATGTTGCTGTTCAATTTTCTAGACATTTATGTGCTATTGCAGTCGCAGCAGCCAGTGCATGAGAACACGATATTTAAAATACCGGTGTGTTAAACCACTCTCTCACCTTTTAGCGGAGAAATTCAAGAGTGAATTGCATTTAAACCGACGTTTTTTGGTCACCACACCCAACCTCAAAGTGTCACTTTCCCTGAACTCTTGTGCCAACGAATGAACGTTTGTTAAGTAAATCACGATTAAGTGTGTTGTTGTTGGGTTTTCTTACTGGTGCTCTGAGAGTTAAGTGCCATTCACTCTGCAGGTTTACCACATTAAAATGAAGACCTTTGTCACTTTACCGAGTGCATAGATATCCTTCTTtgaagtatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagcatcgGCCAATGTGAGTAGGTCctttatttatgttgttttacaATCCGAATAGGTGTTACCTAGTAGTTTACTTACTGAAGCAAAGAACCATCGTGGGAGGCTTGGCTTTCCAAGCCTTTCTAAAACAAAGTGAGTgaattttcttgtttgttttaaaaaaaaaaaaaaaacatgtcattaaAGATATGAgcaataaatcaaaattgtcttgctcttaaaaaaaaaagaaaaaagaaaaaaaaaaaagaccctgcATGACACATGGACATTTACTGTACAAAACTATCTTTGGAGGGGGAATTTACAAACGCTTACTGTAAGTTTTATTATAAGTGTCAATGAAAACGTGACTGTATGACTATTTCAATCCGTTCAGTAGTCCAGGAAGTCCAATGTCACAGAGGTCACTGATACTACTGGACAGGGAACAGAgtgattatatgattatatttaaagcagatatagatagattttaaaaaggtcAATCACCATAGATAATCacgttcatttaaatgaatttgaagCGTACCTCTGAAGTTCTCATTATTGACAAGAAACGCGAGGCAAATAAAGAATGGAAATTCGTGCAGTATTACGCTACTATATTTGGCTGCAGACAgaaccatttaataaaaaccatCTTAGAGAAGTTTCACAGATGAAGGTATTATTCGAATTTGACTTTTTCACTCGTTATGAATCGGATTGCAGATACATGAACGTCACATTTGGTCCCGTTTACAGTGAACCATCATTTTGACAGCAGTTATCTGTTTCATTTCAATGCCTCAACTTTATTTTTGCTGCTAATGTTTTATCCGATTTAGAGAGTTTAGGAGTTTTTCACTCGACGGCTGTCACGGCGATGGCTAACAGCTGTCGATAATAATTTTATCAGCTTGGTATGACTTGGAAAAATAACCTTTCTTGCCAAAAGGCTCCTTTTCTAAGCAAATGAAGTGGAGCATGTGCTGTGTGATTACAGAAGACTCGGTTCATTGGTTTTCCACTACCTCTCGTTATgcttagttattttttttctcatctagttgttaatgttaaatgtttattttgatctACTTGAAGCCTAATACTGTAAATGAAATGGGTTTACAAAGAAGAGtagcattttcttttgtttgtttgttgaattctttttagcataattatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacacacttataCTCACAAAGAATTCAGGAAACGTGCTGTTTAAGGGCTAATCCCATATTGCCTATGCAAATATCTTAATTGTCATTTTGGAATAATTAGTGACTGAGGAATGTTTTCCTGAAAATGGGGGGAACACTGGTTTACATTTGCCCTTTTCTGATATTCCTTAGTCTCTTTTCGGTCTCATATTATGTCATATACAAAATCCTTCTTGACGAAACAGCTACTCAATTAAGATTGAAATAAATCTGTGTTGTGTCTACTGTGGGTTGACAGTTCACTATTGATGTAAAGTGCATATTGAATGTAAGGTACTGTGCATGCTAAAGTTTATGGAAATCTCTGGAGCCGCACTGGGCAGGAGGGAAGTAATTGAATTATTTGTGGATGAAGCGAGTgtctattgttgtttttaatggtgCTTCAGTCTTTTTTGCAAAGGTTGAAGGGCTACTTTGGGCACTTTAAACACGCTTTTCACGAACAAGAATATCTACCTCTTGGTTCTGTTCTCTCCGTATGCTTGATATAGAAGAACAACGTAGCTTGCACACATTTCGATTGTTTTGACTTGGTGTAGAGCCACAGGTGAACAGGCAGGCGCTTTTTAGGGACTGAATTGGAGCTCAACCTCATGTTGCTTTTCTTCCTGTTTAAACAAAGGATTGACAGTTTGTGCCCAAGCAAAGACACGTATTCTGCGTAAAGAAAACGCTCATTTACTCCAGCATCTGTTATAGCATGTGCTTGCGTTATGTGATATTGTTGTTATTACAGAAAAGAAGTGTTAGCAGCGCTCAGTAGTCACGGCATTACTGGTGTGCTACACCTTTCCCAATTCTCCATTGTAAGCACATGAAATATGCTCTTTACATTCATGAGACATCAATGCTATTGATTGGAAGGGTTGTGAATTTTAACGACCCgcaatatatttgaatattgcGAGGAGGAAGGCTTCATGTACATCagcttttctttcattaaatCGTTTTTCGCTATCACATGGAATTGGAAAGATATCTGGTAACGTTTTTCACATTCAAATGTGTTGCCTGACTGTAAAATCATTATTCTTAGTTCATTCACTGTCGTCTTTCTAAAGCCTCGTGGTGGATTCTGAATtagttgtgtttatttgatcaattcaCAGTTACTTTCCAATTGTTCTCATGATTAAAACTACGACTACAACTAACTTCACAGAGTAACttgctgaatttttttaatttcaacattttattgctAAAACATTGTGTACCACAAactttacatattaaaaaaaacatagttttgtTGCTTCGTTCACACAAACAACCTGccattgtctgtgtgtgtgtgtctgtatgtatgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataagattagAAGTGATATAGAGCAGCCCTGTGTACATTCATGCTATGGTAAAAAGGAGAATTATTAATAGAAGTGCTATAATTTCATGGCATCTTTCAGACTCTGGAGGCAAACTGACTTCTGTATCACAGTTTATCACAGTCACCCTGAAGTGCCTTGAATGTTTAGGCCATGGTTTATGATTTATAGGGAAGATGTTCGTCTTTTAAATCCTGCGCTCTTCTCTAGGATTGAATGCATGATGCACGCTGTAAGCAAAGGTCATTTGCACATGCAGGAAGACGTTAAAGCCAAGATTTTTGGAAATAAGTGTGAACTGatagcattttagcattttagccgTTCAGCTTCTGTTATTGTCCTCtgctcaaaagaaaacaaaatcatcacCATCTTGAAGTTGTGCTTATTATATAAGTGTTTGGTGCTTATTATCTGTCACATGATGAAATATCAAACCTGCCATCCCATTGTCACGGTATTTTTTACAGACTTGCCCTGTTTGGTTTTTCCTTGGATCAGACACAGATCAGGCCTTCACTGAAGGCATTCTTTAGAGCTGTGCCATGATATGAGTCTTAATAAATCACCTATTTTAATAGAAACGATCAAGTATTTAATCATAATTCCGTTGTTTTTAATACCAGGGGACAAACTATAATGCCTTTGTAAATTATAACAACTCATAGaagaaaaatgatattttatatctgGCATgcttttgctatttaaaatagtttagttAACACAATACTGTACAAGTATATATAGAAGTACTGCAGTCTGCAGAAAATAACACTGAATCTCTCGGAAGAGTTTTAAAAATGGATATATATTGGAAATATTAGACGTTTCTTTATACGGTATTCTGTGCTGAAGTCTCAAAACTTGGTGAAATGACTGAAATGACTTTTAGCAATGAAATTAGTTTATTGTAAAGCGATGCGGTTTCGTTCAAGAAAGGCAGTACTGGTTTATTCAAAGTTGAGCCCTTGCGAATGGGCATCTTTCAGATCACATGTACTCCTGCATGATCACTTTAAAAACAGAgaacaaatgtatttgtagaCATCAAATAAAGTGACTTACAATATG

Function

symbol description
rgs17 Is expressed in cranial ganglion; neurons; pectoral fin; and retinal ganglion cell layer. Orthologous to human RGS17 (regulator of G protein signaling 17).

NR:

description
regulator of G-protein signaling 17-like

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005096 GTPase activator activity molecular_function

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255627.1 True 6782 mRNA 0.38 6 8683957 8701125

Neighbor

gene id symbol gene type direction distance location
map3k21 si:ch211-120p12.3,LOC107743542,LOC107666507,LOC107552954,LOC108434955 coding downstream 20368 8647454 ~ 8663589 (-)
prim2 prim2,LOC107666539,LOC107725490,LOC107676604,LOC107743543,LOC108443732 coding downstream 43950 8585581 ~ 8640007 (-)
si:dkey-103j14.5 si:dkey-103j14.5,LOC107725445,LOC107666467,LOC107601805 coding downstream 182355 8480892 ~ 8501602 (-)
LOC122356335 kif1bp,LOC107666503,LOC107676599,LOC107743600,LOC107601781 coding downstream 261919 8416732 ~ 8422038 (-)
srgn LOC107601835,LOC107725442,LOC107666570 coding downstream 270145 8410008 ~ 8413812 (-)
phactr2 phactr2,LOC107666519,LOC107601847,LOC107552951,LOC107743595,LOC107676579 coding upstream 43719 8744844 ~ 8778565 (-)
cog2 cog2,LOC107601846,LOC107725477,LOC107666500,LOC107743537,LOC107676580,LOC107552949 coding upstream 81873 8782998 ~ 8790869 (-)
galnt2 galnt2,LOC107743534,LOC107725470,LOC107666462,LOC107676591 coding upstream 108326 8809451 ~ 8874001 (-)
urb2 urb2,LOC107725468,LOC107666477,LOC107552917 coding upstream 177396 8878521 ~ 8892805 (-)
rab4a rab4a,LOC107601855,LOC107666448,LOC107676603 coding upstream 207690 8908815 ~ 8917062 (-)
G92021 pcnxl2,LOC107725461,LOC107601842,LOC107666362,LOC107743596,LOC107676602 non-coding downstream 5571 8667496 ~ 8678386 (-)
LOC122356657 NA non-coding downstream 6700 8675587 ~ 8677257 (-)
LOC122356656 NA non-coding downstream 8421 8669235 ~ 8675536 (-)
G92004 NA non-coding downstream 91383 8591358 ~ 8592574 (-)
G91968 NA non-coding downstream 212655 8469272 ~ 8471302 (-)
G92195 sf3b5,LOC107601807 non-coding upstream 37850 8738975 ~ 8740089 (-)
G92205 pgbd5,LOC107601786,LOC107725485,LOC107552948,LOC107743535 non-coding upstream 95746 8796871 ~ 8803406 (-)
G92235 NA non-coding upstream 273960 8975085 ~ 8975334 (-)
G92251 echs1,LOC107743519,LOC107725439,LOC107601864,LOC107676592,LOC107666378 non-coding upstream 320685 9021810 ~ 9022207 (-)
G92263 NA non-coding upstream 406945 9108070 ~ 9108361 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 636056 8043565 ~ 8047901 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other downstream 867578 7809849 ~ 7816379 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 2184384 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 2287531 6358201 ~ 6396426 (-)
LOC122356805 LOC107666373,LOC107587882 other downstream 2456685 6220175 ~ 6227272 (-)
G92267 NA other upstream 413968 9115093 ~ 9115551 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 1473288 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 1931125 10632250 ~ 10634566 (-)
G92819 NA other upstream 2223819 10924944 ~ 10935331 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 2499427 11200552 ~ 11218985 (-)

Expression


Co-expression Network