hells (hells,LOC107727385,LOC107586490,LOC107699304,LOC107708407,LOC107678596,LOC107589556)


Basic Information

Item Value
gene id hells
gene name hells,LOC107727385,LOC107586490,LOC107699304,LOC107708407,LOC107678596,LOC107589556
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 4626388 ~ 4672250 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255632.1
TTGTTATATAGTTCCAAAATAGAATCGAATAATTAAACATGCGGCGTTAGACGGGCACCCCTTCAAATGTGCGCCGGAATGGTTCAGTCCACAGTGGCGCGAAACGCCGAGCTCTCCACAGAGGAGTTTCACGTTACTGGCGCGAGGTTGTTGTGTCTGCCGGCAACGTGCCTCCACTCCTGCCATCAGAAGAGCGGCTGTatcattgtatatatttttgtgaagaCATAGTCTCAGTTCGCGTGCTGTTTGCGTTCCGTTCCGCTCTTACCAAACGCTCGCGTGTCCGTTGCTTAAGGCTTTGTTGCGCGTTAACTAGTTAGGCCGCCGGTTAGACATATTTGCCTTGCATATATCAAGCTACGCTGCAGACGTTTGGTAAGGTTTGAGAGAAGTGTTTATTTCTACAGACGGTTTATCCAGAACGCAGCAGAAATGAGCGGCGTCGTCAAAGAAGAGGCACGCAGTGTTTCTCCTCACTGCCCCAAACCCAACGAATCCGAGGAGCCAGAAGGAACCGCTATGGAGGATGCCGCCGCTGTCGAAAAAAGCCAGCAAGGAGAGGTTGTCATTACAAaagagatggaggaggaggagaagcaTTTAGTGGAGGagggagagaagaaagaaaaagaaatgatggAAGAGGCCCGGCTGTCATGGGAGAAAGATTCTCAAGAGATGCGTTTCAAACGACTTCAGCATCTTTTGGAGAAAAGCAACATTTACTCCAAGTTTCTGCTCACAAAGATGGAACAGCAGCAGCAAGATgaaaaaaataaaaaggagagACAGGAGAAGAAAGCAGCTAGTAAGAAGCAAAAGGGAAATGATAAAATGACCGTCAAAGTTGAAAGAAAGAAGCGTGAAAGGGAAGAGGATTACAAAATTGCAGATGTTATGACCAGAGAGGAAATTCTGTCGAAAGCTAAAAGACCTAAATTGGAAGAGgGGGCTCATTCGTCAGAGAAACTGGAAGCTGAGGATATAGAGAAGATGAGCGACACCAACTCCGACATTAAAAGTCGGCTCTCTGAGAATTTGCGGGAAAACAGCAAGCAGATGGTGGATCCGAAGAGGACGGTGAATGGCCAGCCGGTGCCTGCAGCGCAGCCCAAGCTCTTCACCGGGGGAGTGATGAGGTGGTACCAGGTGGAAGGCATCGAGTGGCTCAGGATGCTGTGGGAGAATGGTATCAATGGTATCCTGGCTGATGAGATGGGTCTTGGGAAAACCATTCAGTGCATCGCTCATATTGCGATGATGGTGGAGAAGAAGGTCCTCGGGCCCTTCCTAGTTGTGGCTCCTTTGTCCACTCTTCCCAACTGGATCTCAGAATTCAAGCGCTTCACCCCACAGCTGTCTGTCTTGCTGTATCATGGCCCGCAAAAAGAGAGGTGGGACCTGGTGAAGACGATACATCAGGCGCAGGGTTCTCTCAGAATGTGTCCTGTGGTTGTTACTTCCTTTGAAATAGCCATGATAGACAGGAAGCTTCTACAGCGTTTCCACTGGAACTATATGATTGTGGATGAGGGTCACCGGATTAAAAACTTGAATTGCCGGCTGGTGCAAGAACTAAAGATGCTGATGACTGACAACAAACTGCTGCTGACGGGAACCCCCCTGCAGAATAACCTGTCCGAGCTGTGGTCTCTACTCAACTTCCTCCTCCCTGATGTGTTTGATGACCTGAAGAGttttGAGTCATGGTTTGACATCAGCACCATCACTTCAGATGCAGAAAACATTGTGGCTAATGAGCGTGAGCAGAATATCCTTCACATGCTTCATCAGATCCTCACACCCTTTCTTCTGAGAAGGCTGAAGTCCGACGTCACGCTGGAGGTTCCACCTAAGAAAGAGATCGTAGTGTACGCGCCCCTCACCAACAAACAGGAGGCCTTTTACATGGCCATAGTTAACAGGACTATAGCAAAGCTGCTGGGACAGGAGAAGGATGTTTCTGCTCCTGTGCCGCTAACGTCCAGCGGCCGACCAATGCGCAGGGCCGGGAAGGTGGTCAACTACTTTGAGTCAAACACTGATTCTTTGCAAGATCTTGAGAAATACCTAGAGAAGGTTCAGAACGAGGTGGAAAGTCAGCCAAGCTCCAGCCCAGTGTTGGATGTCTTCATGCCGGTTAATGCTCAAATCAACTTGAAACTGCAAAACATACTGATGCTGCTGAAGAGGTGCTGCAACCATGCTTACTTGATAGAGTATCCCTTGGACCCTGCCACTGGAGAATTTAAGATTGATGAGGACTTAGTGGAAGCATCAGGGAAGCTTCTTATCCTGGACCGAATGCTTCCTGAACTGAAGAAAAGAGGGCACAAGgtGCTGATCTTCAGCCAGATGACCTCTATATTAGACATTCTGATGGATTATTGTTATCTCCGTGGTTATGAGTACAGCCGGCTGGACGGGTCAATGAAGTACACAGCCCGAGATGAGAATATGAAGAAGTTTTCTTCTGATCCAGAGgtgttcctcttcctcctgaGCACTCGAGCTGGTGGTCTTGGGATCAACCTCACAGCTGCCGACACAGTCATCATCTTTGACAGCGACTGGAATCCCCAGGCAGATTTGCAGGCTCAGGATCGGTGTCACCGTATTGGGCAAACGAAGCCTGTGATGGTTTACCGCCTCATTACGGCCAACACCATTGATGAGAAGATCCTGGAGAGAGCCTCTGCCAAGAGAAAGCTGGAGAAGATGGTCATTCACAAAAATAAGTTTAAAGGCTCTAAAGCAGAGCTCAAACAGACCAAGAGCTGCTTGGATGTAAATGAGCTTGCAGAACTGCTGAAGTCCAGAGACTACGACAGGGCAGTGAAGGGCACTAAAGGAAAGGTCATCAGTGATAAAGATCTACAGATCCTGCTGGACCGCAGTGATTTATTGAATCAAGCCAAGAAGCGTGTTAAACGGGAGAAGGACGGGGTGTTTAAAGTTATTGACACCAAAGATGATAGTGGTGACATCAGTCTGTCTTGAAATCTGCCATTAGGCCAAAGTTGAGCTATGATTGTGACACCCATCAAGCAAAGCTGCCTGCTTGTTCTCCTCAACTTTTTCCATTTTAGACTTAAGTTGACCATCGTTGCTTTTAATAAGTCCATCCTTTGGTTATGATTGTTAGCACATTTAACATGTTTCTTTTTCCCAATGCCATGTCAAGTTTTGTTTTGGGATTAGCACGAAAAAAAGGAATCCTACATTTTGGCTATGTTGTAAATAGTGTTATACATTTCATATGTAGTTAACTGAATAGAAATTGCACATGTAAACCGCTTTAACGCACTTTCACCCTCTAGAATACTATAgaacaaacctttttttggttttttcaagataataaatattttctatactatgcgtgacatttatttaaagttgggCTATAGTCTTGCTTTTCAAACAACTGCAAAAGTGTTCCATTACTACAGGAGAAAGTGTGCATGTGCACA
>XM_043255633.1
GTGTTTGTGCAGGTTTGTTTCTAAACCGGGacgcaaaagaaaaaaaaagaaagaagagaaactGTTGACAACCGCAACGAGTCAGTATGAGCAGAGCTTCAAAATTCAAGTGATGGCCTGAAGTGGGAGATGCGTGTGACATTTGCGGAGGACTCATCCAACTGGCCAGCCATCCTTGAGGAAATGCCAAGAGGCAGGGGCAGGTCGTTGCCACCTCTTTGCTGCTAAAGATACTTTGCCAACTTCTCCTCATAGCCAACACCGATGAGAGAAACGACAGACACAACGTGACCAAGCGTCGTCAAAGAAGAGGCACGCAGTGTTTCTCCTCACTGCCCCAAACCCAACGAATCCGAGGAGCCAGAAGGAACCGCTATGGAGGATGCCGCCGCTGTCGAAAAAAGCCAGCAAGGAGAGGTTGTCATTACAAaagagatggaggaggaggagaagcaTTTAGTGGAGGagggagagaagaaagaaaaagaaatgatggAAGAGGCCCGGCTGTCATGGGAGAAAGATTCTCAAGAGATGCGTTTCAAACGACTTCAGCATCTTTTGGAGAAAAGCAACATTTACTCCAAGTTTCTGCTCACAAAGATGGAACAGCAGCAGCAAGATgaaaaaaataaaaaggagagACAGGAGAAGAAAGCAGCTAGTAAGAAGCAAAAGGGAAATGATAAAATGACCGTCAAAGTTGAAAGAAAGAAGCGTGAAAGGGAAGAGGATTACAAAATTGCAGATGTTATGACCAGAGAGGAAATTCTGTCGAAAGCTAAAAGACCTAAATTGGAAGAGgGGGCTCATTCGTCAGAGAAACTGGAAGCTGAGGATATAGAGAAGATGAGCGACACCAACTCCGACATTAAAAGTCGGCTCTCTGAGAATTTGCGGGAAAACAGCAAGCAGATGGTGGATCCGAAGAGGACGGTGAATGGCCAGCCGGTGCCTGCAGCGCAGCCCAAGCTCTTCACCGGGGGAGTGATGAGGTGGTACCAGGTGGAAGGCATCGAGTGGCTCAGGATGCTGTGGGAGAATGGTATCAATGGTATCCTGGCTGATGAGATGGGTCTTGGGAAAACCATTCAGTGCATCGCTCATATTGCGATGATGGTGGAGAAGAAGGTCCTCGGGCCCTTCCTAGTTGTGGCTCCTTTGTCCACTCTTCCCAACTGGATCTCAGAATTCAAGCGCTTCACCCCACAGCTGTCTGTCTTGCTGTATCATGGCCCGCAAAAAGAGAGGTGGGACCTGGTGAAGACGATACATCAGGCGCAGGGTTCTCTCAGAATGTGTCCTGTGGTTGTTACTTCCTTTGAAATAGCCATGATAGACAGGAAGCTTCTACAGCGTTTCCACTGGAACTATATGATTGTGGATGAGGGTCACCGGATTAAAAACTTGAATTGCCGGCTGGTGCAAGAACTAAAGATGCTGATGACTGACAACAAACTGCTGCTGACGGGAACCCCCCTGCAGAATAACCTGTCCGAGCTGTGGTCTCTACTCAACTTCCTCCTCCCTGATGTGTTTGATGACCTGAAGAGttttGAGTCATGGTTTGACATCAGCACCATCACTTCAGATGCAGAAAACATTGTGGCTAATGAGCGTGAGCAGAATATCCTTCACATGCTTCATCAGATCCTCACACCCTTTCTTCTGAGAAGGCTGAAGTCCGACGTCACGCTGGAGGTTCCACCTAAGAAAGAGATCGTAGTGTACGCGCCCCTCACCAACAAACAGGAGGCCTTTTACATGGCCATAGTTAACAGGACTATAGCAAAGCTGCTGGGACAGGAGAAGGATGTTTCTGCTCCTGTGCCGCTAACGTCCAGCGGCCGACCAATGCGCAGGGCCGGGAAGGTGGTCAACTACTTTGAGTCAAACACTGATTCTTTGCAAGATCTTGAGAAATACCTAGAGAAGGTTCAGAACGAGGTGGAAAGTCAGCCAAGCTCCAGCCCAGTGTTGGATGTCTTCATGCCGGTTAATGCTCAAATCAACTTGAAACTGCAAAACATACTGATGCTGCTGAAGAGGTGCTGCAACCATGCTTACTTGATAGAGTATCCCTTGGACCCTGCCACTGGAGAATTTAAGATTGATGAGGACTTAGTGGAAGCATCAGGGAAGCTTCTTATCCTGGACCGAATGCTTCCTGAACTGAAGAAAAGAGGGCACAAGgtGCTGATCTTCAGCCAGATGACCTCTATATTAGACATTCTGATGGATTATTGTTATCTCCGTGGTTATGAGTACAGCCGGCTGGACGGGTCAATGAAGTACACAGCCCGAGATGAGAATATGAAGAAGTTTTCTTCTGATCCAGAGgtgttcctcttcctcctgaGCACTCGAGCTGGTGGTCTTGGGATCAACCTCACAGCTGCCGACACAGTCATCATCTTTGACAGCGACTGGAATCCCCAGGCAGATTTGCAGGCTCAGGATCGGTGTCACCGTATTGGGCAAACGAAGCCTGTGATGGTTTACCGCCTCATTACGGCCAACACCATTGATGAGAAGATCCTGGAGAGAGCCTCTGCCAAGAGAAAGCTGGAGAAGATGGTCATTCACAAAAATAAGTTTAAAGGCTCTAAAGCAGAGCTCAAACAGACCAAGAGCTGCTTGGATGTAAATGAGCTTGCAGAACTGCTGAAGTCCAGAGACTACGACAGGGCAGTGAAGGGCACTAAAGGAAAGGTCATCAGTGATAAAGATCTACAGATCCTGCTGGACCGCAGTGATTTATTGAATCAAGCCAAGAAGCGTGTTAAACGGGAGAAGGACGGGGTGTTTAAAGTTATTGACACCAAAGATGATAGTGGTGACATCAGTCTGTCTTGAAATCTGCCATTAGGCCAAAGTTGAGCTATGATTGTGACACCCATCAAGCAAAGCTGCCTGCTTGTTCTCCTCAACTTTTTCCATTTTAGACTTAAGTTGACCATCGTTGCTTTTAATAAGTCCATCCTTTGGTTATGATTGTTAGCACATTTAACATGTTTCTTTTTCCCAATGCCATGTCAAGTTTTGTTTTGGGATTAGCACGAAAAAAAGGAATCCTACATTTTGGCTATGTTGTAAATAGTGTTATACATTTCATATGTAGTTAACTGAATAGAAATTGCACATGTAAACCGCTTTAACGCACTTTCACCCTCTAGAATACTATAgaacaaacctttttttggttttttcaagataataaatattttctatactatgcgtgacatttatttaaagttgggCTATAGTCTTGCTTTTCAAACAACTGCAAAAGTGTTCCATTACTACAGGAGAAAGTGTGCATGTGCACACAG

Function

symbol description
hells Predicted to enable ATPase, acting on DNA and DNA binding activity. Acts upstream of or within regulation of DNA methylation. Predicted to be active in nucleus. Is expressed in several structures, including alar plate midbrain region; central nervous system; immature eye; margin; and pectoral fin musculature. Human ortholog(s) of this gene implicated in immunodeficiency-centromeric instability-facial anomalies syndrome 4. Orthologous to human HELLS (helicase, lymphoid specific).

NR:

description
lymphocyte-specific helicase-like isoform X1

GO:

id name namespace
GO:0045132 meiotic chromosome segregation biological_process
GO:0000775 chromosome, centromeric region cellular_component
GO:0005634 nucleus cellular_component
GO:0005524 ATP binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0004386 helicase activity molecular_function

KEGG:

id description
K19001 HELLS, DDM1; ATP-dependent DNA helicase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255632.1 True 3476 mRNA 0.46 23 4626391 4633648
XM_043255633.1 False 3332 mRNA 0.46 25 4626388 4672250

Neighbor

gene id symbol gene type direction distance location
galm galm,LOC107586487,LOC107699302 coding downstream 15280 4607224 ~ 4611108 (-)
socs5b socs5b,socs5,LOC107727375,LOC107586485,LOC107708402,LOC107699300 coding downstream 154438 4462022 ~ 4471950 (-)
prop1 LOC107727379,LOC107699286,LOC107586498 coding downstream 180100 4441892 ~ 4446288 (-)
ttc7a ttc7a,LOC107586483,LOC107678602 coding downstream 188896 4404523 ~ 4437492 (-)
epcam epcam,LOC107707150,LOC107727388,LOC107699297 coding downstream 272637 4351284 ~ 4353751 (-)
gbf1 gbf1,LOC107708418 coding upstream 165528 4837778 ~ 4904092 (-)
ninl ninl,LOC107708420,LOC107589549,LOC107699311,LOC107727377,LOC107582480,LOC107678585 coding upstream 259169 4931419 ~ 4955793 (-)
sema4ga sema4ga,LOC107690158,LOC107582524,LOC107733683,LOC107678493,LOC107708465 coding upstream 336322 5008572 ~ 5040509 (-)
slf2 LOC107690156,LOC107582525,LOC107678590,LOC107567840 coding upstream 368314 5040564 ~ 5054042 (-)
wdr32 wdr32,LOC107733687,LOC107582526,LOC107708468,LOC107690155,LOC107678556 coding upstream 392048 5064298 ~ 5070193 (-)
G90786 NA non-coding downstream 3584 4549111 ~ 4622804 (-)
G90785 NA non-coding downstream 41427 4560776 ~ 4584961 (-)
G90802 epas1,LOC107586486,LOC107727363,LOC107699276,LOC107589559,LOC107708405 non-coding downstream 55630 4545021 ~ 4570758 (-)
G90750 NA non-coding downstream 212617 4390355 ~ 4413771 (-)
LOC122356721 NA non-coding downstream 278864 4338842 ~ 4347524 (-)
G90842 NA non-coding upstream 78182 4750432 ~ 4750968 (-)
G90846 NA non-coding upstream 157501 4829751 ~ 4833144 (-)
G91022 NA non-coding upstream 286133 4958383 ~ 4959411 (-)
G91025 NA non-coding upstream 292352 4964602 ~ 4964959 (-)
LOC122356716 NA non-coding upstream 456262 5128512 ~ 5129707 (-)
hcar1-3 LOC107590023,LOC107678489,LOC107707144,LOC107699282,LOC107586503,LOC107736563 other downstream 570975 4052743 ~ 4055413 (-)
wu:fj16a03 NA other downstream 670433 3951763 ~ 3955955 (-)
timm23b timm23b,timm23a,LOC107565600,LOC107669571,LOC107739474,LOC108263229,LOC108426535 other downstream 1190808 3422753 ~ 3435580 (-)
dlk2 dlk2,LOC107669558,LOC107696386,LOC107559779,LOC107728069 other downstream 1327839 3281337 ~ 3298549 (-)
G90445 znf318,LOC107739464,LOC107655625,LOC107728066,LOC107559766 other downstream 1381492 2990418 ~ 3244896 (-)
LOC122356061 LOC107699307,LOC107586507,LOC107708387,LOC108442385,LOC108263686,LOC107727357,LOC106576682,LOC104955882 other upstream 716 4672966 ~ 4689168 (-)
col13a1 col13a1,LOC107678564,LOC107708413,LOC107589579,LOC107727372,LOC107586491 other upstream 18632 4690882 ~ 4779732 (-)
metap1 metap1,LOC107556924,LOC107733733,LOC107695030 other upstream 1248252 5920502 ~ 5926677 (-)
gng2 gng2,gbg2,LOC107569409 other upstream 1389435 6061685 ~ 6073197 (-)
LOC122356805 LOC107666373,LOC107587882 other upstream 1547925 6220175 ~ 6227272 (-)

Expression


Co-expression Network