LOC122356683 (LOC107666548,LOC107743620,LOC107676590,LOC107563041,LOC107601825,LOC107725441,LOC107601828)


Basic Information

Item Value
gene id LOC122356683
gene name LOC107666548,LOC107743620,LOC107676590,LOC107563041,LOC107601825,LOC107725441,LOC107601828
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8306483 ~ 8308649 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255663.1
GGGTCAAAGTCTACCTCGGTCTCAAATACAGCACTAAAAATACTCAAAACATcgaagaaaaaaacagagagcTGAAGAGCTGTAATCAATGGAGATTCCAATATTTACTGTTGATGCTTTTACTAATGTGCCTTTTAAAGGTAATCCTGCTGCAATATGTCTCATAGAGAATGAGCTGCAAGATGATCTTTATCAGAGCATTGCTGCTGAAATGAATTTATCAGAGACTGCTTTCATCACAAAAAGGAATTCTGTGGATTTTTCTTCAGGTTCGAGGTTTGGGTTACGCTGGTTTACTCCCACATGCGAGGTCCCACTATGTGGACATGCTACCCTGGCCTCAGCAGCAGTGCTCTTTTACATGAAAAAAAATATCAACCCTATACTGGTGTTTGAGACGATGAGTGGAGAGCTTTATGTGCGTCAGCATGAAGAATCTCTAATAATGGACTTCCCCTTAAACAAACCAGACCCCCAGgatcaacatgaaatcaaaggTCTTCTGAAAGCCGTAGTAGGAGATGTACCCATTCAGGATGTGTGCTACAATCCAACCACAAGAAACCTGGTGATTCGTCTGGCTGACACATGTGACAGATCTGAACTCACATCTTTGAAGCCTGAAGAAAAAGCTCTGTTGAAAAATGACTCTACTGGGAAGATGAACGGTGCCATTGTTACAATGAAGGGAGCTCCAAACACACAACCTGGATATGACTTTTATTCCCGTTACTTTGCTCCTTGGTTAGGGGTCCTTGAAGATCCAGTCTGTGGGTCTGCGCATACAGTTCTTGCTGCCTACTGGTCTGAAAAGCTGAACAAAAAGAAGATGTTGGCATATCAGTGCTCCAGTCGTGGAGGAGAGCTGGGGCTGGAGATCAGGGATGATGGTCGACTCAACATCAGTGGTCGAGCAAAAGTCGTTCTTCAGGGAACTCTTAACATCTAGACAACCTGAAAAACCTTCTCACTGAATGTGTTTATAGCTGAATGGAAATACATAAATTTTTTTCCCTAACGATCTTCAAACTGATGTTTCGTTCATTGAATGGACAATTGTGGTTATTTGAGCgccaaaatacaataaaaaaagatgtgctTTTAAAA

Function

NR:

description
PREDICTED: phenazine biosynthesis-like domain-containing protein

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255663.1 True 1107 mRNA 0.42 9 8306483 8308649

Neighbor

gene id symbol gene type direction distance location
LOC122356685 pbldp,pbld,LOC107676590,LOC107743620,LOC107563041,LOC107666548,LOC107601825,LOC107725441,LOC107601828 coding downstream 635 8303493 ~ 8305848 (-)
LOC122356686 pbld,LOC107601828,LOC107743620,LOC107676590,LOC107725441,LOC107563041,LOC107666548,LOC107601825 coding downstream 3575 8300820 ~ 8302908 (-)
LOC122356679 NA coding downstream 15338 8287539 ~ 8291145 (-)
psda si:ch211-150i13.1,LOC107725451,LOC107743558,LOC107696897,LOC107563050,LOC107601823 coding downstream 18964 8256388 ~ 8287519 (-)
glud1a glud1a,glud1,LOC107725450,LOC107563055,LOC107743560,LOC107601820,LOC107666407,LOC103026661 coding downstream 70785 8225398 ~ 8235698 (-)
LOC122356681 LOC107743620,LOC107666548,LOC107676590,LOC107563041,LOC107725441,LOC107601825,LOC107601828 coding upstream 788 8309437 ~ 8314824 (-)
LOC122356684 LOC107666548,LOC107743620,LOC107676590,LOC107563041,LOC107601825,LOC107725441,LOC107601828 coding upstream 6540 8315189 ~ 8318815 (-)
rufy2 rufy2,LOC107725492,LOC107743555,LOC107563060,LOC107676589 coding upstream 15996 8324645 ~ 8337036 (-)
tspan15 tspan15,LOC107563042,LOC107601779,LOC107743619,LOC106612421,LOC106589828 coding upstream 34447 8343096 ~ 8361457 (-)
hk1 hk1,LOC107676584,LOC107725457,LOC107666459,LOC107743551 coding upstream 60288 8368937 ~ 8381953 (-)
G91916 NA non-coding downstream 38410 8267766 ~ 8268073 (-)
G91891 NA non-coding downstream 83868 8168737 ~ 8222615 (-)
G91889 NA non-coding downstream 138551 8157258 ~ 8167932 (-)
G91796 NA non-coding downstream 174635 8131243 ~ 8131848 (-)
G91769 NA non-coding downstream 265265 7997680 ~ 8041218 (-)
G91960 NA non-coding upstream 126377 8435026 ~ 8435920 (-)
G91967 LOC107743599,LOC107601782,LOC107725459,LOC107666363 non-coding upstream 156432 8465081 ~ 8468983 (-)
G91968 NA non-coding upstream 160623 8469272 ~ 8471302 (-)
G92004 NA non-coding upstream 282709 8591358 ~ 8592574 (-)
G92021 pcnxl2,LOC107725461,LOC107601842,LOC107666362,LOC107743596,LOC107676602 non-coding upstream 358847 8667496 ~ 8678386 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 258582 8043565 ~ 8047901 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other downstream 490104 7809849 ~ 7816379 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 1806910 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 1910057 6358201 ~ 6396426 (-)
LOC122356805 LOC107666373,LOC107587882 other downstream 2079211 6220175 ~ 6227272 (-)
G92267 NA other upstream 806444 9115093 ~ 9115551 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 1865764 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 2323601 10632250 ~ 10634566 (-)
G92819 NA other upstream 2616295 10924944 ~ 10935331 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 2891903 11200552 ~ 11218985 (-)

Expression


Co-expression Network