LOC122356685 (pbldp,pbld,LOC107676590,LOC107743620,LOC107563041,LOC107666548,LOC107601825,LOC107725441,LOC107601828)


Basic Information

Item Value
gene id LOC122356685
gene name pbldp,pbld,LOC107676590,LOC107743620,LOC107563041,LOC107666548,LOC107601825,LOC107725441,LOC107601828
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8303493 ~ 8305848 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255665.1
CATCAGGGTCAAAGTCTACCTCGGTCTCAAATACAGCACTAAAAATACTCAAAACATCgaagaaaaaaacagagctGAAGAGCTGTAATCAATGGAGATTCCAATATTTACTGTTGATGCTTTTACTAATGTGCCTTTTAAAGGTAATCCTGCTGCAATATGTCTCATAGAGAATGAGCTGCAAGATGATCTTTATCAGAGCATTGCTGCTGAAATGAATTTATCAGAGACTGCTTTCATCACAAAAAGGAATTCTGTGGATTTTTCTTCAGgttcaAGGTTTGGGTTACGCTGGTTTACTCCCACAAATGAGGTCCCACTATGTGGACATGCTACCCTGGCCTCAGCAGCAGTGCTCTTTTACATGAAAAAAAATATCAACCCTGTACTGGTGTTTGAGACGATGAGTGGAGAGCTTTATGTGCGTCAGCATGAAGAATCTCTAATAATGGACTTCCCCTTAAACAAACCAGACCCCCAGGATCAACATGAAATCAAGGATCTTTTGAAAGCCGTAGTAGGAGATGTACCCATTCAGGATGTGTGCTACAATCCAACCACAAGAAAATTGATGATTCGTCTGGCTGACACATGTGACAGATCTGAACTTACATCTTTGACGCCTGAAGAAAAAACTCTATTGAAAAATGACTCTACTGGGAAGATTAAAGGTGTTATTGTTACAATGAAGGGAGCTCCAAACACACAACCTGGATATGACTTTTATTCCCGTTACTTTGCTCCTTGGTTAGGGATCTTTGAAGATCCAGTCTGTGGGTCTGCGCATACAGTTCTTGCTGCCTACTGGTCTGAAAAGCTGAACAAAAAGAAGATGTTGGCATATCAGTGCTCCAGTCGTGGAGGAGAGCTGGGGCTGGAGATCAGGGATGATGGTCGACTCAACATCAGTGGTCGAGCAAAAGTCGTTCTTCGGGGAACTCTTAaaatctagatttttttttttccctgcaaaCTGATGTTTCGCTCACTTAGTGGACTTACTGTATGTGCCaacatagaataaaaaaacccaactggttttaaaattcaaattgcatgttttattaattttattgcaaaatatgaataaaattgtCTGCTGGGCAGA

Function

symbol description
pbldp Predicted to enable isomerase activity. Predicted to act upstream of or within biosynthetic process. Predicted to be active in cytoplasm.
pbld Predicted to enable isomerase activity. Predicted to act upstream of or within biosynthetic process. Predicted to be active in cytoplasm. Orthologous to human PBLD (phenazine biosynthesis like protein domain containing).

NR:

description
PREDICTED: phenazine biosynthesis-like domain-containing protein

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255665.1 True 1108 mRNA 0.40 9 8303493 8305848

Neighbor

gene id symbol gene type direction distance location
LOC122356686 pbld,LOC107601828,LOC107743620,LOC107676590,LOC107725441,LOC107563041,LOC107666548,LOC107601825 coding downstream 585 8300820 ~ 8302908 (-)
LOC122356679 NA coding downstream 12348 8287539 ~ 8291145 (-)
psda si:ch211-150i13.1,LOC107725451,LOC107743558,LOC107696897,LOC107563050,LOC107601823 coding downstream 15974 8256388 ~ 8287519 (-)
glud1a glud1a,glud1,LOC107725450,LOC107563055,LOC107743560,LOC107601820,LOC107666407,LOC103026661 coding downstream 67795 8225398 ~ 8235698 (-)
mmrn2a LOC107666404,LOC107706028,LOC107696890,LOC107743562,LOC107563047,LOC107601778 coding downstream 87521 8190359 ~ 8215972 (-)
LOC122356683 LOC107666548,LOC107743620,LOC107676590,LOC107563041,LOC107601825,LOC107725441,LOC107601828 coding upstream 635 8306483 ~ 8308649 (-)
LOC122356681 LOC107743620,LOC107666548,LOC107676590,LOC107563041,LOC107725441,LOC107601825,LOC107601828 coding upstream 3589 8309437 ~ 8314824 (-)
LOC122356684 LOC107666548,LOC107743620,LOC107676590,LOC107563041,LOC107601825,LOC107725441,LOC107601828 coding upstream 9341 8315189 ~ 8318815 (-)
rufy2 rufy2,LOC107725492,LOC107743555,LOC107563060,LOC107676589 coding upstream 18797 8324645 ~ 8337036 (-)
tspan15 tspan15,LOC107563042,LOC107601779,LOC107743619,LOC106612421,LOC106589828 coding upstream 37248 8343096 ~ 8361457 (-)
G91916 NA non-coding downstream 35420 8267766 ~ 8268073 (-)
G91891 NA non-coding downstream 80878 8168737 ~ 8222615 (-)
G91889 NA non-coding downstream 135561 8157258 ~ 8167932 (-)
G91796 NA non-coding downstream 171645 8131243 ~ 8131848 (-)
G91769 NA non-coding downstream 262275 7997680 ~ 8041218 (-)
G91960 NA non-coding upstream 129178 8435026 ~ 8435920 (-)
G91967 LOC107743599,LOC107601782,LOC107725459,LOC107666363 non-coding upstream 159233 8465081 ~ 8468983 (-)
G91968 NA non-coding upstream 163424 8469272 ~ 8471302 (-)
G92004 NA non-coding upstream 285510 8591358 ~ 8592574 (-)
G92021 pcnxl2,LOC107725461,LOC107601842,LOC107666362,LOC107743596,LOC107676602 non-coding upstream 361648 8667496 ~ 8678386 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 255592 8043565 ~ 8047901 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other downstream 487114 7809849 ~ 7816379 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 1803920 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 1907067 6358201 ~ 6396426 (-)
LOC122356805 LOC107666373,LOC107587882 other downstream 2076221 6220175 ~ 6227272 (-)
G92267 NA other upstream 809245 9115093 ~ 9115551 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 1868565 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 2326402 10632250 ~ 10634566 (-)
G92819 NA other upstream 2619096 10924944 ~ 10935331 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 2894704 11200552 ~ 11218985 (-)

Expression


Co-expression Network