LOC122356686 (pbld,LOC107601828,LOC107743620,LOC107676590,LOC107725441,LOC107563041,LOC107666548,LOC107601825)


Basic Information

Item Value
gene id LOC122356686
gene name pbld,LOC107601828,LOC107743620,LOC107676590,LOC107725441,LOC107563041,LOC107666548,LOC107601825
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8300820 ~ 8302908 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255667.1
CTGTAATATCATTGGGGTCAAAGTCTTGATTTCAAATACTGTTCTATAAATACTTAAAAGGTGCAAAAAGCCCTGGAGCTGAAGAGCTGTAATCAATGGAGATTCCAATATTTACTGTTGATGCTTTTACTAATGTGCCTTTTAAAGGTAATCCTGCTGCAATATGTCTCATAGAGAATGAGCTGCAAGATGATCTTTATCAGAGCATTGCTGCTGAAATGAATTTATCAGAGACTGCTTTCATCACAAAAAGGAATTCTGTGGATTTTTCTTCAGgtgCAAGGTTTGGGTTACGCTGGTTTTCTCCCACAAATGAGGTCCCACTATGTGGACATGCTACCCTGGCCTCAGCAGCAGTGCTCTTTTACATGAAAAAAAATATCAACCCTGTACTGGTGTTTGAGACGATGAGTGGAGAGCTTTATGTGCGTCAGCATGAAGAATCTCTAATAATGGACTTCCCCTTAAACAAACCAGACCCCCAGGACCAACATGAAATCAAGGATCTTTTAAAGGCTGCTGTAGGAGATTTACCCGTTCAGGATGTGTGTTACAGTCCAGCCACAAAGAAACTGATGGTTCGTCTTGCTGACACATGTGACAGGTCTGAACTTGAGTCACTGAGGCCAGAGGAAGAGGCTCTTCTAAGAAATGAAACCACTGGTAAGATTAAAAGTCTTATCATTACACTGAAAGGAGCAGAGAGCACTCAGTCTGGATATGACTTCTACTCCCGTGTCTTCGCCCCATGGGTTGGAGTCCCTGAAGATCCAGTCACTGggtCTGCACATACAGTCCTTGCTGGCTACTGGTCTGAAAAgctcaagaaaaacaaaatgttagctCACCAGTGCTCCAGTCGTGGAGGCGAGGTAAAGCTGGAGATAAGAAATGATGGTCGACTGGACATCATCGGTCAGGCGCAGATCATTCTGCATGGAactattaaaatctaaaacttgtggatgtgataaaaaaatctattttttctttatattaatgtgaaagtaatgcatcatttaataaaatccaCAAAGACCTGCAAACTCCT

Function

symbol description
pbld Predicted to enable isomerase activity. Predicted to act upstream of or within biosynthetic process. Predicted to be active in cytoplasm. Orthologous to human PBLD (phenazine biosynthesis like protein domain containing).

NR:

description
PREDICTED: phenazine biosynthesis-like domain-containing protein

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255667.1 True 1051 mRNA 0.42 9 8300820 8302908

Neighbor

gene id symbol gene type direction distance location
LOC122356679 NA coding downstream 9675 8287539 ~ 8291145 (-)
psda si:ch211-150i13.1,LOC107725451,LOC107743558,LOC107696897,LOC107563050,LOC107601823 coding downstream 13301 8256388 ~ 8287519 (-)
glud1a glud1a,glud1,LOC107725450,LOC107563055,LOC107743560,LOC107601820,LOC107666407,LOC103026661 coding downstream 65122 8225398 ~ 8235698 (-)
mmrn2a LOC107666404,LOC107706028,LOC107696890,LOC107743562,LOC107563047,LOC107601778 coding downstream 84848 8190359 ~ 8215972 (-)
si:dkey-191g9.5 si:dkey-191g9.5,LOC107666514,LOC107565930,LOC107713893,LOC107743575,LOC107696877,LOC108438182 coding downstream 471608 7818743 ~ 7829212 (-)
LOC122356685 pbldp,pbld,LOC107676590,LOC107743620,LOC107563041,LOC107666548,LOC107601825,LOC107725441,LOC107601828 coding upstream 585 8303493 ~ 8305848 (-)
LOC122356683 LOC107666548,LOC107743620,LOC107676590,LOC107563041,LOC107601825,LOC107725441,LOC107601828 coding upstream 3575 8306483 ~ 8308649 (-)
LOC122356681 LOC107743620,LOC107666548,LOC107676590,LOC107563041,LOC107725441,LOC107601825,LOC107601828 coding upstream 6529 8309437 ~ 8314824 (-)
LOC122356684 LOC107666548,LOC107743620,LOC107676590,LOC107563041,LOC107601825,LOC107725441,LOC107601828 coding upstream 12281 8315189 ~ 8318815 (-)
rufy2 rufy2,LOC107725492,LOC107743555,LOC107563060,LOC107676589 coding upstream 21737 8324645 ~ 8337036 (-)
G91916 NA non-coding downstream 32747 8267766 ~ 8268073 (-)
G91891 NA non-coding downstream 78205 8168737 ~ 8222615 (-)
G91889 NA non-coding downstream 132888 8157258 ~ 8167932 (-)
G91796 NA non-coding downstream 168972 8131243 ~ 8131848 (-)
G91769 NA non-coding downstream 259602 7997680 ~ 8041218 (-)
G91960 NA non-coding upstream 132118 8435026 ~ 8435920 (-)
G91967 LOC107743599,LOC107601782,LOC107725459,LOC107666363 non-coding upstream 162173 8465081 ~ 8468983 (-)
G91968 NA non-coding upstream 166364 8469272 ~ 8471302 (-)
G92004 NA non-coding upstream 288450 8591358 ~ 8592574 (-)
G92021 pcnxl2,LOC107725461,LOC107601842,LOC107666362,LOC107743596,LOC107676602 non-coding upstream 364588 8667496 ~ 8678386 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 252919 8043565 ~ 8047901 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other downstream 484441 7809849 ~ 7816379 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 1801247 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 1904394 6358201 ~ 6396426 (-)
LOC122356805 LOC107666373,LOC107587882 other downstream 2073548 6220175 ~ 6227272 (-)
G92267 NA other upstream 812185 9115093 ~ 9115551 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 1871505 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 2329342 10632250 ~ 10634566 (-)
G92819 NA other upstream 2622036 10924944 ~ 10935331 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 2897644 11200552 ~ 11218985 (-)

Expression


Co-expression Network