LOC122356705


Basic Information

Item Value
gene id LOC122356705
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 16779594 ~ 16785628 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255704.1
TGAAAGTTTGGCTCCGAATGAGCGTTtagttgaagaaacacactgCCGTGGTCTGCCGATCGCTAAACACAAAGAACACAGAGAGATTGATTTCGAGTTGGATATCAGCCGCACATATCCTCATCCCCATCTCCAACAGTCTTTGGTGAATCAACTTCGGAAGAGTCTCCAACCGCATCCAAAGATCCAGGAACGACATGGATGTGCCCTTCAATCTGTCCCTGTCTAATCTCTCCCTTCCTCTTTCCCCAACGTCTCCACCTCTGGATCTTCACCATCCCCTCCcgaccatcatcatcatcgtgtGTCTGTTTGCTCTGTTCGGTGGCATGGTGATCTTTCTGGCGGTGGGCTGCCCGTCGGGAGGGTCCTGGGGAGTTAATGGAGACAGTCTCTCCTGCGGACAGAATCTGTCCAGCGAGCCCCAGCTGAAGCTCTGGAAACGTTTGGGCTCGATGAGGCAGTCGTTTTCCTCAGCGCCGACCTTCAGAAGACCCGTACAGCCATACATAGCCCAGAGCAGGAAGCTATCAGGGTCAACGTCACCCGCAGAGTCAAAGACAAACGACTCCCACACATATATTTCTATACCGGCTCTTCTGCAGTATTCCACTGAGATATAAGCTCTGTTGCATCACCTAGTGAGCTGTCTTGCTATCTAGTACTTACATAGGCAGCAGCCTTCTAAGTGACAGATTTAAAGTGGATTTCATAGGCAACAGCTATGTGCACCGGAAACTTGACTCAAAATTGATTTTCAAGGAGTTGTAAGCTTGTTACTAAGCTAGTGACTGTTGCTAATGCggacaaaaatacataaatatgaaataaaaacaattgcatttaatttaaattccatggtctgaataaaatgtagaatttagAATTGGACTGACTATTTTTACTGATCTTAACGCATTGCATACTGGGATTACGGTACCTTTTCCATGTCATGCTGCAGTGGTtgttatatacaaaaaaaataaaagcatttcaaactaattggaaattaataaataaaaactaaacactaA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255704.1 True 1034 mRNA 0.44 2 16779594 16785628

Neighbor

gene id symbol gene type direction distance location
capn2a capn2a,LOC107679193,LOC107549147,LOC107586086,LOC107676365,LOC107734257,LOC107197131,LOC108426130 coding downstream 163088 16607735 ~ 16616506 (-)
capn1a capn1a,LOC107679188,LOC107676389,LOC107734280,LOC107586085,LOC107549131 coding downstream 172672 16594967 ~ 16606922 (-)
lrrfip2 lrrfip2,LOC107679173,LOC107676384,LOC107734278,LOC107586082,LOC107724585 coding downstream 187522 16571548 ~ 16592072 (-)
fam83ha NA coding downstream 221618 16547186 ~ 16557976 (-)
LOC122356270 LOC107549152,LOC107747275 coding downstream 233102 16543081 ~ 16546492 (-)
vsir LOC107679168,LOC107549146,LOC107724606,LOC107676381,LOC107568522 coding upstream 9927 16795555 ~ 16805141 (-)
LOC122356703 eif3s6ip,eif3l,LOC107679167,LOC107676390 coding upstream 41381 16827009 ~ 16832240 (-)
ablim1a ablim1a,LOC107676391,LOC107724609 coding upstream 138309 16923937 ~ 16962479 (-)
fhip2a LOC107568115,LOC107679198,LOC107724610,LOC107734297,LOC107676387,LOC107575459 coding upstream 178667 16964295 ~ 16975489 (-)
LOC122356833 mdga1,LOC107679144,LOC107676363,LOC107561756 coding upstream 427305 17212933 ~ 17365849 (-)
G94455 mrpl14,LOC107676385,LOC107679189,LOC107734281 non-coding downstream 184863 16593425 ~ 16594731 (-)
G94453 mlh1 non-coding downstream 210344 16567915 ~ 16569250 (-)
G94425 NA non-coding downstream 260768 16515857 ~ 16518826 (-)
G94416 opn3,LOC107665579,LOC107747290,LOC107549142,LOC107549136,LOC107586115 non-coding downstream 347164 16430674 ~ 16432430 (-)
G94414 opn3,LOC107665579,LOC107549142,LOC107747290,LOC107719228 non-coding downstream 349301 16429841 ~ 16430293 (-)
G94511 NA non-coding upstream 198878 16984506 ~ 17015657 (-)
G94516 NA non-coding upstream 236475 17022103 ~ 17030063 (-)
LOC122356952 NA non-coding upstream 846621 17632249 ~ 17672523 (-)
G94608 NA non-coding upstream 936100 17721728 ~ 17722300 (-)
G94619 NA non-coding upstream 1005256 17790884 ~ 17791890 (-)
G94412 opn3,LOC107549142,LOC107665579,LOC107586115,LOC107747290,LOC107719228,LOC107676370 other downstream 353059 16425697 ~ 16426535 (-)
cisd1 cisd1,LOC107549159,LOC107747252,LOC107665600,LOC105902329,LOC108443718 other downstream 487215 16290154 ~ 16292379 (-)
pcdh15a pcdh15a,LOC108443650,LOC107586072 other downstream 610390 16009687 ~ 16169204 (-)
G94216 NA other downstream 894372 15877527 ~ 15885222 (-)
LOC122356531 cnnm1,LOC107702746,LOC107719212,LOC107747260,LOC107601048,LOC107665556 other downstream 986054 15774777 ~ 15793540 (-)
LOC122356193 slc35f4,slc35f3,LOC107664436,LOC107586844,LOC107559881,LOC107668528,LOC107747268,LOC107665565,LOC107664233,LOC107736862 other upstream 589122 17374750 ~ 17387006 (-)
LOC122356088 ate1,LOC107679187,LOC107655512 other upstream 1759943 18545571 ~ 18672893 (-)
LOC122357020 LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639 other upstream 2172075 18957703 ~ 18975524 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other upstream 2500402 19286030 ~ 19362041 (-)
disc1 LOC107666898,LOC107730373 other upstream 3076902 19862530 ~ 19907062 (-)

Expression


Co-expression Network