mrps26 (LOC107678578,LOC107690153,LOC107582565,LOC107733693,LOC107708396,LOC107567847)


Basic Information

Item Value
gene id mrps26
gene name LOC107678578,LOC107690153,LOC107582565,LOC107733693,LOC107708396,LOC107567847
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 5129847 ~ 5131447 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255724.1
AAGAACATGGCCTGCCGGAAGATGCTCAATGTTATGTAGGCATGCTGGAAGCTGTAACCCTATAACACCGTGCTGCGTTCATCCTTTCCTTTGGAAGCTGTGTGTTCCGCAAGGACGTTAAGCGCGAAGCATTATTAGGTTCATTGTTCAACATGCTGCGGGCTTTATCGAGGTGCCACGCTCCTGCAGTCCGTCTTCTCGCTCCTCGCGCCGCTGTCATGGTCAAAACTGTCAGGGAAAGAAAATCTCGAACAGACCCCAAGGCGAAGTCAAAAATGGGACGGATCAAGACCCCCCCTCCGGTAGATCCGGTAGAAATGGTTGTGCTGAATGAGCGTTACACTGAATACAAGCTGATCTTGAGAGCCCTGAGATTTGAGTTCAAGGAGCAGATGCTGAGGAAGAAACATGAAGAGAAGGTCGGTTCCGTGGCGGAGAAAAAAGCTGAAATTGAGGCAGAAGAGCATCGGTCACTGATGGTGATGAACAATGCTGAGAACCTCAGGTTACGTAAAATAAGAGAGCAGCGCGTTCAGGAGGAGGCTGAGGCCGCTGAGCTGAAGAAGAGAGAGGCAGCCATCTCACGGCAGCAAGAGCTGGAGAACTAcattaaagagaaagaaagacagattcTTCTGCTGCAAGAAGAGGCGAAGGACTTCATCACACTGGACAATCTAGATCAGCGGATTGAAGAGGCTCTAGACAACCCCAAAAACTACAACTTTGCCATCGATAAAGAAGGACGTGTTGTCAAACGGACTGCTTTTACGCAATAAGGAtttcaaaaaccaaaacacCTACAGTGtgcataacatatatatactgtcAGGGCCATCGCTTAACACtgtttggacagaaaatgtttcaaaatttgtgtgtgtgtgtgtgtgtgtgtatactcaAAATGTCTCAAATATACTGATGTCTAAA

Function

NR:

description
28S ribosomal protein S26, mitochondrial

GO:

id name namespace
GO:0005763 mitochondrial small ribosomal subunit cellular_component
GO:0005882 intermediate filament cellular_component
GO:0005198 structural molecule activity molecular_function

KEGG:

id description
K17405 MRPS26; small subunit ribosomal protein S26

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255724.1 True 933 mRNA 0.47 4 5129847 5131447

Neighbor

gene id symbol gene type direction distance location
si:dkey-33c12.3 si:dkey-33c12.3,LOC107582528,LOC107733690,LOC107690152,LOC107567853,LOC107678577 coding upstream 990 5125547 ~ 5128857 (+)
LOC122356713 LOC107567852,LOC107678576,LOC107708478 coding upstream 4455 5118830 ~ 5125392 (+)
si:dkey-33c12.4 LOC107690151,LOC107733685,LOC107582527,LOC107708477,LOC107567855,LOC107678591 coding upstream 23915 5098574 ~ 5105932 (+)
grxcr1b grxcr1,LOC107690195,LOC107733694,LOC107708472 coding upstream 53328 5074929 ~ 5076519 (+)
cpxm1a cpxm1a,LOC107708467,LOC107678553,LOC107567841 coding upstream 66383 5055153 ~ 5063464 (+)
LOC122356791 LOC107733689,LOC107690150,LOC107582530,LOC107708385,LOC107678491,LOC106918274,LOC103144266 coding downstream 1042 5132489 ~ 5136230 (+)
sfxn5a sfxn5a,sfxn5,LOC107567846,LOC107733701,LOC107690191,LOC108262907,LOC100691010 coding downstream 67427 5198874 ~ 5212864 (+)
cdc25b LOC107690144,LOC107733779,LOC107582534,LOC107567856,LOC107718443,LOC107678573 coding downstream 121454 5252901 ~ 5259209 (+)
gfra4a gfra4a,gfra4,LOC107693311,LOC107747595,LOC107695017,LOC107568637,LOC107733662 coding downstream 213079 5344526 ~ 5431348 (+)
ky LOC107666377,LOC107747591,LOC107556906,LOC107733664,LOC107695013,LOC107568638 coding downstream 436055 5567502 ~ 5574433 (+)
G90905 NA non-coding upstream 93731 5035359 ~ 5036116 (+)
G90879 LOC107733683,LOC107690158,LOC107582524,LOC107678493,LOC107708465 non-coding upstream 116185 5003410 ~ 5013662 (+)
G90888 NA non-coding upstream 164832 4964702 ~ 4965015 (+)
G90700 NA non-coding upstream 658103 4471065 ~ 4471744 (+)
G90659 socs5b,socs5,LOC107727375,LOC107586485,LOC107699300,LOC107708402 non-coding upstream 663979 4459639 ~ 4465868 (+)
G90957 NA non-coding downstream 266048 5397495 ~ 5435571 (+)
G90985 NA non-coding downstream 370195 5501642 ~ 5505510 (+)
G90997 NA non-coding downstream 392298 5523745 ~ 5525112 (+)
G91003 LOC107556907,LOC107666376 non-coding downstream 409045 5540492 ~ 5597345 (+)
G91124 NA non-coding downstream 633259 5764706 ~ 5765211 (+)
si:ch73-49p17.1 LOC107678601,LOC107727381,LOC107589548,LOC107708422 other upstream 131856 4992153 ~ 4997991 (+)
si:ch211-250c4.5 LOC107727386,LOC107699305,LOC107586489,LOC107708409,LOC107678597 other upstream 434005 4561648 ~ 4695842 (+)
G90660 epcam,LOC107699293,LOC107727368,LOC107586477,LOC107707148,LOC107678540,LOC107707150,LOC108422531,LOC107723711 other upstream 775916 4182499 ~ 4353931 (+)
pkdcca pkdcca,LOC107669579,LOC107739483,LOC107718010,LOC107695038,LOC107590011,LOC107586469 other upstream 1297297 3809053 ~ 3832550 (+)
prkn park2,LOC107739476,LOC107669573,LOC107696378 other upstream 1416084 3620406 ~ 3713763 (+)
rab11fip5a LOC107733767,LOC107690145,LOC107582533 other downstream 46271 5177718 ~ 5198404 (+)
ap5s1 ap5s1,LOC107693289,LOC107678575,LOC107718444,LOC107567857,LOC107582535,LOC107733789 other downstream 129589 5261036 ~ 5271247 (+)
lamtor3 lamtor3 other downstream 819770 5951217 ~ 5952517 (+)
commd8 commd8,LOC107666485,LOC107556927,LOC107733703,LOC107585230 other downstream 851071 5982518 ~ 5986979 (+)
akt3a akt3a,akt3,LOC107587843,LOC107666464,LOC107585250,LOC107666430,LOC103024575,LOC108422057,LOC106589689 other downstream 1123156 6254603 ~ 6358017 (+)

Expression


Co-expression Network