LOC122356727 (LOC107585260,LOC107585259,LOC107733721,LOC107733720,LOC107698744)


Basic Information

Item Value
gene id LOC122356727
gene name LOC107585260,LOC107585259,LOC107733721,LOC107733720,LOC107698744
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 6840597 ~ 6843540 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255743.1
ttcaGCTTGACGTTTTTCTCAAATGTTTCCTCGATATGCAGAAATGAGAGCTGTAAATGCCCAGTCCGTGTTCTTTGCTCTTTGTACACTTCCGTGATTTTTGTTGTGAAGAGTAAACTAAGTGCTCCGTGCTCTTTAATATGAAGCGCAAAACAGTTAAATCTGACAGAAAAAATCAGTCTGCTGGAAGACTGCAACAGTCTGGCCAGAAACCTAAGGATTTAAATGCGCATGCAAGCCCTTCTTTCTTAAGATCCAAGTGGAAATGGACTTGGACTAAAATAGCACTTTCTCTCTGCGTCCTCTCTGTATCAGTACCATTTCTTCTACATCTCTTCTCTgACTCTATTGACCTGAGCCGACCTTCAGATATAGGGCTCAATCACACTATAAACATGTACCTTACGCCCGAGGAGGGAGTGAACGTGGGCGTGTGGCACACTGTACCTGAGCATCGATGGAAGGAGGCACAGGGGAAAGATCTGGACTGGTACGAGAGTGCTCTGGGGGACGGATCGCCCGTTTTCATCTACCTCCATGGCAATGGGGGTAACAGATCCGCACCCCATCGTATTGGAGTTGCAAATGTCTTGAGTGCTCTTGGTTATCACGTTTTGGTGATGGACTACAGAGGTTTTGGGGACTCCACCGGAGAGCCTACAGAGCCTGGTCTGATTACTGATGCTATGTACTTGTACCACTGGGTTAAAGCACGCAGTGGAAACAgcccggtgtgtgtgtggggtcaCTCGCTTGGCAGTGGTGTTACAACTAACACTGCAGTGAAACTACTGGAGCAAGGAGAGCAGTTTGATGGAATAATACTCGAGGGTGCATTCGGAAATATACAGTTTACAAACAATCAATCTTTTGAACACCCGTTTACTTGGTTTTATTGGAAGTTCCCCTACATCCAGTTCTTCCTTTTTAATCcacttaaaaacaactttttgttcTTTCCTACTCAAGATAATTTGCAGAAACTTAGAACTCCCCTCTTGATCCTCCATGCTGAAGATGACCATTTAGTGCCCCTTGCCACAGCTCAAGAGAACTACAGAATTGCAAAAAAGGCCCAGAACTCGGATAAGCGGGTCAGACTGGTCCCATTTGATGGATCGCTTGGATACCTTCATAATGGTCTATATAAAGACCCTGCTTTGCCAGATATCATAAGGGAGTTTGTGCAGTCACTGAtgacatgagagagagagatttacaCACCAACTAATAGCCAGCTAAATAGCTTTTTATACAACTGGTGTTTTAAACAGTATGCATTTCttgaataaaacattgtaatGTCTGATGTTTTTCCTCCAAATTCCCATTctcattaatatttgtaaaatgaatttctttctagatgtaaatgacatttttaatgttaaatacaataaaaagagaTTTGTATTACTGTA
>XM_043255744.1
TTGACGTTTTTCTCAAATGTTTCCTCGATATGCAGAAATGAGAGCTGTAAATGCCCAGTCCGTGTTCTTTGCTCTTTGTACACTTCCGTGATTTTTGTTGTGAAGAGTAAACTAAGTGCTCCGTGCTCTTTAATATGAAGCGCAAAACAGTTAAATCTGACAGAAAAAATCAGTCTGCTGGAAGACTGCAACAGTCTGGCCAGAAACCTAAGGATTTAAATGCGCATGCAAGATCCAAGTGGAAATGGACTTGGACTAAAATAGCACTTTCTCTCTGCGTCCTCTCTGTATCAGTACCATTTCTTCTACATCTCTTCTCTgACTCTATTGACCTGAGCCGACCTTCAGATATAGGGCTCAATCACACTATAAACATGTACCTTACGCCCGAGGAGGGAGTGAACGTGGGCGTGTGGCACACTGTACCTGAGCATCGATGGAAGGAGGCACAGGGGAAAGATCTGGACTGGTACGAGAGTGCTCTGGGGGACGGATCGCCCGTTTTCATCTACCTCCATGGCAATGGGGGTAACAGATCCGCACCCCATCGTATTGGAGTTGCAAATGTCTTGAGTGCTCTTGGTTATCACGTTTTGGTGATGGACTACAGAGGTTTTGGGGACTCCACCGGAGAGCCTACAGAGCCTGGTCTGATTACTGATGCTATGTACTTGTACCACTGGGTTAAAGCACGCAGTGGAAACAgcccggtgtgtgtgtggggtcaCTCGCTTGGCAGTGGTGTTACAACTAACACTGCAGTGAAACTACTGGAGCAAGGAGAGCAGTTTGATGGAATAATACTCGAGGGTGCATTCGGAAATATACAGTTTACAAACAATCAATCTTTTGAACACCCGTTTACTTGGTTTTATTGGAAGTTCCCCTACATCCAGTTCTTCCTTTTTAATCcacttaaaaacaactttttgttcTTTCCTACTCAAGATAATTTGCAGAAACTTAGAACTCCCCTCTTGATCCTCCATGCTGAAGATGACCATTTAGTGCCCCTTGCCACAGCTCAAGAGAACTACAGAATTGCAAAAAAGGCCCAGAACTCGGATAAGCGGGTCAGACTGGTCCCATTTGATGGATCGCTTGGATACCTTCATAATGGTCTATATAAAGACCCTGCTTTGCCAGATATCATAAGGGAGTTTGTGCAGTCACTGAtgacatgagagagagagatttacaCACCAACTAATAGCCAGCTAAATAGCTTTTTATACAACTGGTGTTTTAAACAGTATGCATTTCttgaataaaacattgtaatGTCTGATGTTTTTCCTCCAAATTCCCATTctcattaatatttgtaaaatgaatttctttctagatgtaaatgacatttttaatgttaaatacaataaaaagagaTTTGTATTACTGTA
>XM_043255745.1
TCCGTGATTTTTGTTGTGAAGAGTAAACTAAGTGCTCCGTGCTCTTTAATATGAAGCGCAAAACAGTTAAATCTGACAGAAAAAATCAGTCTGCTGGAAGACTGCAACAGTCTGGCCAGAAACCTAAGGATTTAAATGCGCATGCAAGACTCTATTGACCTGAGCCGACCTTCAGATATAGGGCTCAATCACACTATAAACATGTACCTTACGCCCGAGGAGGGAGTGAACGTGGGCGTGTGGCACACTGTACCTGAGCATCGATGGAAGGAGGCACAGGGGAAAGATCTGGACTGGTACGAGAGTGCTCTGGGGGACGGATCGCCCGTTTTCATCTACCTCCATGGCAATGGGGGTAACAGATCCGCACCCCATCGTATTGGAGTTGCAAATGTCTTGAGTGCTCTTGGTTATCACGTTTTGGTGATGGACTACAGAGGTTTTGGGGACTCCACCGGAGAGCCTACAGAGCCTGGTCTGATTACTGATGCTATGTACTTGTACCACTGGGTTAAAGCACGCAGTGGAAACAgcccggtgtgtgtgtggggtcaCTCGCTTGGCAGTGGTGTTACAACTAACACTGCAGTGAAACTACTGGAGCAAGGAGAGCAGTTTGATGGAATAATACTCGAGGGTGCATTCGGAAATATACAGTTTACAAACAATCAATCTTTTGAACACCCGTTTACTTGGTTTTATTGGAAGTTCCCCTACATCCAGTTCTTCCTTTTTAATCcacttaaaaacaactttttgttcTTTCCTACTCAAGATAATTTGCAGAAACTTAGAACTCCCCTCTTGATCCTCCATGCTGAAGATGACCATTTAGTGCCCCTTGCCACAGCTCAAGAGAACTACAGAATTGCAAAAAAGGCCCAGAACTCGGATAAGCGGGTCAGACTGGTCCCATTTGATGGATCGCTTGGATACCTTCATAATGGTCTATATAAAGACCCTGCTTTGCCAGATATCATAAGGGAGTTTGTGCAGTCACTGAtgacatgagagagagagatttacaCACCAACTAATAGCCAGCTAAATAGCTTTTTATACAACTGGTGTTTTAAACAGTATGCATTTCttgaataaaacattgtaatGTCTGATGTTTTTCCTCCAAATTCCCATTctcattaatatttgtaaaatgaatttctttctagatgtaaatgacatttttaatgttaaatacaataaaaagagaTTTGTATTACTGTA

Function

NR:

description
PREDICTED: monoacylglycerol lipase ABHD12-like

GO:

id name namespace
GO:0047372 acylglycerol lipase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255743.1 True 1421 mRNA 0.42 13 6840597 6843540
XM_043255744.1 False 1400 mRNA 0.42 13 6840603 6843540
XM_043255745.1 False 1227 mRNA 0.43 12 6840687 6843540

Neighbor

gene id symbol gene type direction distance location
six3a six3,six3a,LOC107733790,LOC107585256,LOC107711438,LOC107666567 coding upstream 133205 6704087 ~ 6707392 (+)
camkmt si:ch73-54n14.2,camkmt,LOC107602502,LOC107585255,LOC107733780,LOC107698723,LOC107666367 coding upstream 186364 6561232 ~ 6654233 (+)
slc3a1 slc3a1,LOC107747531,LOC107666489,LOC107698747,LOC107733775 coding upstream 287271 6545507 ~ 6553326 (+)
ppm1ba ppm1ba,LOC107733761,LOC107585253,LOC107747533,LOC107666482,LOC107602505,LOC107698745 coding upstream 297368 6516883 ~ 6543229 (+)
abcg8 abcg8,LOC107666472 coding upstream 389089 6444614 ~ 6451508 (+)
LOC122356807 LOC107585259,LOC107733721,LOC107733720,LOC107585260,LOC107683040 coding downstream 1192 6844732 ~ 6848243 (+)
tm9sf3 tm9sf3,LOC107711435,LOC107698740,LOC107666468,LOC102778527 coding downstream 5995 6849535 ~ 6860874 (+)
sfxn4 sfxn4,LOC107711434,LOC107733723 coding downstream 20606 6864146 ~ 6867334 (+)
eif3s10 eif3s10,eif3a,LOC107666466 coding downstream 29694 6873234 ~ 6885961 (+)
emx2 emx2,LOC107666392,LOC107711418,LOC107733718,LOC107585297 coding downstream 46973 6890513 ~ 6895703 (+)
LOC122356144 NA non-coding upstream 85043 6723280 ~ 6755554 (+)
G91492 NA non-coding upstream 141428 6693662 ~ 6699169 (+)
G91343 NA non-coding upstream 387521 6452744 ~ 6453076 (+)
G91324 NA non-coding upstream 470069 6370210 ~ 6370528 (+)
G91250 gabrb1,LOC106937613 non-coding upstream 838535 5998442 ~ 6002062 (+)
G91545 NA non-coding downstream 99027 6942567 ~ 6942795 (+)
G91594 NA non-coding downstream 203401 7046941 ~ 7047247 (+)
G91673 NA non-coding downstream 966331 7809871 ~ 7810104 (+)
G91681 NA non-coding downstream 979742 7823282 ~ 7825341 (+)
LOC122356873 NA non-coding downstream 1264801 8108341 ~ 8111278 (+)
akt3a akt3a,akt3,LOC107587843,LOC107666464,LOC107585250,LOC107666430,LOC103024575,LOC108422057,LOC106589689 other upstream 482580 6254603 ~ 6358017 (+)
commd8 commd8,LOC107666485,LOC107556927,LOC107733703,LOC107585230 other upstream 853618 5982518 ~ 5986979 (+)
lamtor3 lamtor3 other upstream 888080 5951217 ~ 5952517 (+)
ap5s1 ap5s1,LOC107693289,LOC107678575,LOC107718444,LOC107567857,LOC107582535,LOC107733789 other upstream 1569350 5261036 ~ 5271247 (+)
rab11fip5a LOC107733767,LOC107690145,LOC107582533 other upstream 1642193 5177718 ~ 5198404 (+)
LOC122356719 LOC107585299,LOC107733725,LOC107698728,LOC107711427,LOC107666365,LOC107711426,LOC107585285,LOC107733707 other downstream 249604 7093144 ~ 7147218 (+)
sh2d4ba sh2d4ba,LOC107713884,LOC107666399,LOC107565924,LOC107743625,LOC107696870 other downstream 928020 7771560 ~ 7787307 (+)
chchd1 LOC107713887,LOC107565922,LOC107743624,LOC107696882,LOC107666381,LOC107555316 other downstream 992640 7836180 ~ 7838945 (+)
zswim8 LOC107666425,LOC107565928,LOC107713895,LOC107743573 other downstream 1015158 7858698 ~ 7886690 (+)
G91833 slc37a1 other downstream 1462946 8306486 ~ 8310824 (+)

Expression


Co-expression Network