fgfr3 (fgfr3,LOC107733743,LOC107666479,LOC107556915)


Basic Information

Item Value
gene id fgfr3
gene name fgfr3,LOC107733743,LOC107666479,LOC107556915
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 5708521 ~ 5740890 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255787.1
GGACAGGCAGCGTTTCGGATAGgagtgtgttcgtgtgtgtgtgtgtgtggcagcgCTACGTTGACAGTATGTGTGGAACGGTGGAGGATGTCTGAGTCTGGTCTCTGTGGTGAGGACACTCGTCCCCGCGTCACTGGCCCGGGATGGTCCCGCTCTGTCTCCTTCTGTACCTCGCAGCCCTCATCTCCTCTCCGGTGTACAGTGCCCACCTGCTGTCCCCAGAGCCCACAGATTGGGTGTCGAGTGAGGTGGAAGTCTCTCTGGACGACTATGTGGCAGGAGTTGGGGACACTATAGACCTGTCCTGCACACCGCGTGACTTCCTGGTCCCCATCGTGTGGCAGAAAGACGGCGACGCTGTGTCTCCTAACAACCGTACACGGGTGGGGCAAAAAGTGCTCCGTATCATCAACATCTCCTACGAAGACTCCGGGGTGTATTCCTGTAGACACACCCACAGCAGCACGCTGCTAAGCAACTACACCGTCAGAGTCACCGACTCTCTGTCCTCTGGTGATGATGAGGACTATGATGAAGATGAGGACGATGCAGGTAATGGAAATGAAGCTCCATACTGGACCCGTCCTGACCGGATGGAGAAGAAACTGTTGGCCGTTCCCGCCGCTAATACGGTGAAGTTCCGCTGTCCTGCCACCGGCAACCCCGCTCCCAGCATCCACTGGCTGAAAAACGGGAAGGAATTCAAGGGGGAGCAGAGGATGGGCGGGATTAAATTGAGGGATCAGCAGTGGAGTCTGGTCATGGAGAGTGCCGTTCCATCTGACCGGGGAAACTACACATGTGTGGTGCAAAACAAATACGGGACAATCAAGCACACTTACCAACTCGATGTGCTAGAGCGCTCTCCTCACCGGCCCATCCTACAGGCGGGACTCCCAGCCAATCAGACGGTGGTGGTGGGCAGTGATGTGGAGTTCCACTGTAAGGTGTACAGTGATGCTCAGCCGCACATCCAGTGGCTCAAACACATCGAGGTGAATGGAAGCCAGTATGGGCCCAATGGCGTCCCCTATGTCCACATCCTTAAGAGTTTTGTCAGTAAGGTAAAAGAGGCCCACGATGTGCTGACTCTGTATAATGTGTCAGAAAAAGATGCAGGCCAGTACTGGTGCAGAGCCCACAACTTTGTAGGCATGTCAGAGAATACGTTCTGGCTCATGGTGTTCCAGCCAGTGgtagagatggagagagaggatGACTATGCGGACATCCTCATCTACGTAACGGGCTGCGTGCTCTTCATCCTCACCATGGTCATCATTATCCTCTGCCGTATGCGGATGAACACACAGAAGACTCTCCCCACGCCACCCGTTCAAAAACTGTCCAAATTCCCCCTCAAGAGACAGGTAACAGTGTCCTTGGAATCTAACTCTTCCATGAATTCAAACACCCCGTTGGTCCGGATCGCCCGCCTGTCATCTAGCGATGGGCCCATGCTGCCCAACGTTTCTGAACTTGAGCTGCCCTCTGACCCCAAGTGGGAGTTTCCACGTACTAAACTAACACTGGGAAAACCACTGGGAGAGGGTTGCTTTGGGCAGGTAGTGATGGCTGAAGCCATTGGGATTGACAAAGAGAAACCCAATAAACCTCTTACTGTGGCTGTCAAGATGCTCaaagATGACGGCACAGACAAGGACCTCTCGGACCTTGTGTCTGAAATggagatgatgaagatgattgGAAAACACAAGAACATTATTAACCTACTGGGAGCGTGCACACAAGATGGTCCTCTATATGTGCTGGTGGAATATGCCTCTAAAGGAAATCTTAGGGAATACTTACGTGCGAGAAGACCTCCTGGGATGGACTACTCGTTTGACACTTGTAAAATCCCAAATGAAACTCTGACATTTAAAGATCTGGTGTCCTGCGCCTATCAGGTGGCCAGGGGTATGGAGTACCTGGCCTCAAAGAAGTGTATCCATAGGGATCTTGCAGCCCGGAATGTTCTGGTAACCGAGGACAACGTGATGAAGATTGCAGACTTCGGCCTGGCTAGAGATGTGCACAACATTGACTACTACAAGAAGACCACCAACGGTCGTCTACCCGTCAAATGGATGGCACCAGAAGCACTGTTCGACCGGGTCTACACGCACCAGAGCGATGTGTGGTCTTACGGAGTGTTGTTGTGGGAGATTTTCACACTGGGCGGCTCGCCGTACCCAGGTATCCCAGTGGAGGAGCTCTTTAAACTGCTGAAGGAGGGTCATCGGATGGACAAACCTGCAAACTGCACTCATGAACTGTACATGATTATGCGGGAGTGCTGGCACGCTGTTCCTTCTCAAAGACCCACGTTCAGACAGCTGGTGGAGGATCACGACAGGGTCCTTTCTATGACCTCCACTGACGAATATCTGGACCTGTCGGTGCCGTTCGAACAGTATTCCCCGACCTGCCCAGACTCCAACAGCACCTGTTCCTCCGGCGACGACTCTGTGTTTGCTCACGACCCTTTACCTGACGAGCCCTGCCTCCAAACATCACCTCCACAGCAACGGGGTCATACGAACATAAGCGCCCAGGACAGAAATGGTGGTTTGTTGGAGACCTTCCGGTTGGCTGCACTGGACCAGCATGTGGCGGCAGTGCAGACTGGGCTCCTGGTTCAGTGTGGATCTCATGAAACGCTCGACAAGAAGCTTCAGACTTCCAGCTGTTCACAGGTCTGAAGGACGGATTACGCCCCTCTCCTTCAGCTCCTTTTCTTCCAAATCATTATTCAGCTTTTTGTCTATGAAAAGAGAATTCCTATTTTTATATTCGGCCAGTTTCGTTTTTCCTTTTGCGCGACGCAGTCAGAAGGGTCAAACCATTCCGTGcctaccaaaaaaacaaaaaacagacaaattgCTGGACAGGAAACAAAAAGTACGGATCGACGCTGTGTTACAGCACAGTTCTGAAGAGACAGAGTCGTCCtgtcacacacagacaggaagtGTTTTTACAGCAATATATCTGACTGGAGTGAGAATCAAACCCATGGCCAGTCTCTCCTCTCCACTCCTCACAAAGATcatttttcatccttttttaataagaaaagagAGAACGGTCTCCTAGATGTGAGATTTAAttagaagatatatatatatatataactgtgtGCTTTGTAcgtatattaaagtttttattgtaaatatatagatataaatatgtatCATATTGCAGTCGGTAGCagtgtacttaaaaaaaaaaaaaagaaaaaagaatgacattttaagaGCAAGTGAGCATACACTGTTGAGatcatgtaaacatttaatcttaaaaaagcaaaacaaaagttttatttgaattaacaTGTATATTTGTAAAGCTATTTATAGACGTAAGGTTTTTAAGGGGGTCTAAAATTATAGTCGGGTTTTGGTACTGTAAACAAAgggtttttcttttcaattttgTAAGTTATTTACCACAGAAGTGCAAGATTTCAACCGGTgggttgtgttttatttttgcttgttttcttccATTTCTTAGTTTACAGTGACAAGAATGTATGAGAAGCTAATTGGTGATATCAGCAGAGCAAAATGACGAAATTATGAATTCTAAACACGAAAAGAGTACGCCAGAAGTTGCTTTGCCCATATCTCAGTATTGAATTTAATGATAAAAGGACCACAAGTGCTTCTGATCTTCAAGAGGAAACTGCACCGTTGTATTTTTAACTCCAGTCATACTCACACTTAAAAGcacttttcatcatttttgtATATTCGGAAAAAAAGTGTCCACATTTGGGCTTCCATGCATGAGATCCGTTCGCTACAGTATTTCAAGAAACAGTGTTGGTTTTCTCTGATTATGAGCGCTGGTGGTCTTTTCATTCAGCTCTATGATATGAAGGAGTGCTGTGTGGGTAAAACCTACCATAGCATATAGATGTATGGTGAAACCATATTATGAGTTTGTCGCTCTTATTTGCTCTTTTGCTAATGAATatgtataataacattttgaggTAATCCTCCGGGTCGGTGTGTCTGCAAAGTGCCAAaatctttctctctgctctgaATTTTATGTTAATGAGTACAGAACCGTTATTGCTATTCAACTCTAGCGTGCATGGTTGTCAGATGAGTGTCTCTGGCCCTGCGAATCTAAGCGAAGCATTATGGGATAGCTTGGTCGTGTCTCAGGGTGTCCTCAGACAATTGCATTCAAGCAGAAAGCCGGCAATAATATataatgggggaaaaaaaaagaggatgaTTCGCTTGCTGCTAAACTTCGAAAACTGTAGATTTGATAGGAGGTGACTGTACAGGTGCTCCCTCCTGCAAACCATTGAATTTTTGTACTTGTCAAGTGCCTGGGAGGGAGTTGAGTGGCTGAATATTGCTTTTGAATGTACGGCCACATCAAAAAAAGATATAAGCAGGGTGTTTCTTCGAAATGAGTCGGTATGTGTAAGGCACTTCGTTACCTTAATTCTCAGATTGGGTTCTTAAAGAGACGGATGACGTTGTTCTGTAATTTCTTCTTCTAGCTGAGGGACATCATGTTCTGTTGGAGACAGTGTTTTGAGTGTTCGTCCATTACGTGTGGAGTTATTCGTTTACTGGTGTGGGCAAGCGATCGCTCTcagcttggttttttttttgttttttttgtcgtaCAACCTGTAACCTCTGGCTCACCTCCGCATCCTCCGCTCTACTACTGACAGCCCTTTCGCATTGTTTCAAACATATCAAACAATGTTGGTGGTCCTTCTCCCTCCTTGTCACAAACCcacattatttatttccttgtatttatgttttgttttgttttgtttttcttcacccGCTTGCTTCCGTGACCTTCTCTTATTCAAAAAGGACAGCATTCCTTCATGCTTGTGTGTTTTGGGATGGAGGTGCAGCCAAGATGCGTTGAGGGGTTGAAGAAAGTTTTCTCAAATGTTTACAATGAACATCCAGACAGTTTCAGAGGACAATGTGTTTCCCAGCGCTTTTGAAGTGGCTGGATGTTGAGCAATACTGGTCTGATGTCGACACTCTTTCATTTTACGCATTTGTTCTTTTCCTCTTAAGCTCTATTTGATAGTGCCATTCAGCTCTTATTAGaattaagatattaaattaagttataGATTTAAATTTGCAAATGATTGTTATATGTCGAGTAGATTTTATATaggtgtgttttgttttaatagggATGAAAGCTTCTTTACAGTATTTTCTTACAGAAGAATTGCATTGCATTCCAGGTAGAGTTCTTTCTTTACGCGGTGAGGTAACACGTTTGCAGAATTAAAGGCGTTCGGCATCTGCATCCCTCTCTGTTTAACAAAAGAATGGAATAGTTGACTAacagtgttttgtgttatttttccaTATCTCTGTATCTGTGGAACATTCCGTTCTGTTTCAGTTGTGCCCCTTCCGAGCTGTTAAACCTCTTTACACTATCAGTCTGTGCCTGACGGAATTATGCTGTCAATCAAAACCTTTtcaataaacacaacaaaaccagT

Function

symbol description
fgfr3 Predicted to enable fibroblast growth factor binding activity and fibroblast growth factor-activated receptor activity. Acts upstream of or within regulation of hematopoietic stem cell differentiation. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be integral component of plasma membrane. Is expressed in several structures, including cranium; gut; nervous system; neural rod; and neural tube. Human ortholog(s) of this gene implicated in several diseases, including Crouzon syndrome-acanthosis nigricans syndrome; LADD syndrome; SADDAN; bone development disease (multiple); and carcinoma (multiple). Orthologous to human FGFR3 (fibroblast growth factor receptor 3).

NR:

description
PREDICTED: uncharacterized protein LOC106590439 isoform X1

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0001501 skeletal system development biological_process
GO:0008543 fibroblast growth factor receptor signaling pathway biological_process
GO:0006468 protein phosphorylation biological_process
GO:0008284 positive regulation of cell population proliferation biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0005007 fibroblast growth factor-activated receptor activity molecular_function

KEGG:

id description
K05094 FGFR3, CD333; fibroblast growth factor receptor 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255787.1 True 5533 mRNA 0.45 18 5708521 5740890

Neighbor

gene id symbol gene type direction distance location
ky LOC107666377,LOC107747591,LOC107556906,LOC107733664,LOC107695013,LOC107568638 coding upstream 134088 5567502 ~ 5574433 (+)
gfra4a gfra4a,gfra4,LOC107693311,LOC107747595,LOC107695017,LOC107568637,LOC107733662 coding upstream 277173 5344526 ~ 5431348 (+)
cdc25b LOC107690144,LOC107733779,LOC107582534,LOC107567856,LOC107718443,LOC107678573 coding upstream 449312 5252901 ~ 5259209 (+)
sfxn5a sfxn5a,sfxn5,LOC107567846,LOC107733701,LOC107690191,LOC108262907,LOC100691010 coding upstream 495657 5198874 ~ 5212864 (+)
LOC122356791 LOC107733689,LOC107690150,LOC107582530,LOC107708385,LOC107678491,LOC106918274,LOC103144266 coding upstream 572291 5132489 ~ 5136230 (+)
nsd2 LOC107747575,LOC107666517,LOC107556918,LOC107733764 coding downstream 54350 5795240 ~ 5807876 (+)
lrit3b lrit3b,LOC107556923,LOC107666384 coding downstream 189307 5930197 ~ 5935584 (+)
LOC122357047 enpep,LOC107747565,LOC107666571,LOC107585235,LOC107667073,LOC107733706 coding downstream 195511 5936401 ~ 5946902 (+)
pprc1 pprc1,LOC107666421,LOC107747555,LOC107569410,LOC107667059,LOC107733763,LOC107585240 coding downstream 337327 6078217 ~ 6087501 (+)
oga mgea5,LOC107666422,LOC107585241,LOC107667060 coding downstream 348062 6088952 ~ 6101193 (+)
G91003 LOC107556907,LOC107666376 non-coding upstream 111176 5540492 ~ 5597345 (+)
G90997 NA non-coding upstream 183409 5523745 ~ 5525112 (+)
G90985 NA non-coding upstream 203011 5501642 ~ 5505510 (+)
G90957 NA non-coding upstream 272950 5397495 ~ 5435571 (+)
G90905 NA non-coding upstream 672405 5035359 ~ 5036116 (+)
G91124 NA non-coding downstream 23816 5764706 ~ 5765211 (+)
G91126 NA non-coding downstream 27284 5768174 ~ 5768524 (+)
G91127 NA non-coding downstream 28400 5769290 ~ 5769518 (+)
G91174 LOC107666555,LOC107747569,LOC107556920,LOC107733787,LOC107585221,LOC107695029 non-coding downstream 132117 5873007 ~ 5876739 (+)
G91178 NA non-coding downstream 183650 5924540 ~ 5926325 (+)
ap5s1 ap5s1,LOC107693289,LOC107678575,LOC107718444,LOC107567857,LOC107582535,LOC107733789 other upstream 437274 5261036 ~ 5271247 (+)
rab11fip5a LOC107733767,LOC107690145,LOC107582533 other upstream 510117 5177718 ~ 5198404 (+)
si:ch73-49p17.1 LOC107678601,LOC107727381,LOC107589548,LOC107708422 other upstream 710530 4992153 ~ 4997991 (+)
si:ch211-250c4.5 LOC107727386,LOC107699305,LOC107586489,LOC107708409,LOC107678597 other upstream 1012679 4561648 ~ 4695842 (+)
G90660 epcam,LOC107699293,LOC107727368,LOC107586477,LOC107707148,LOC107678540,LOC107707150,LOC108422531,LOC107723711 other upstream 1354590 4182499 ~ 4353931 (+)
lamtor3 lamtor3 other downstream 210327 5951217 ~ 5952517 (+)
commd8 commd8,LOC107666485,LOC107556927,LOC107733703,LOC107585230 other downstream 241628 5982518 ~ 5986979 (+)
akt3a akt3a,akt3,LOC107587843,LOC107666464,LOC107585250,LOC107666430,LOC103024575,LOC108422057,LOC106589689 other downstream 513713 6254603 ~ 6358017 (+)
LOC122356719 LOC107585299,LOC107733725,LOC107698728,LOC107711427,LOC107666365,LOC107711426,LOC107585285,LOC107733707 other downstream 1352254 7093144 ~ 7147218 (+)
sh2d4ba sh2d4ba,LOC107713884,LOC107666399,LOC107565924,LOC107743625,LOC107696870 other downstream 2030670 7771560 ~ 7787307 (+)

Expression


Co-expression Network