wdr32 (wdr32,LOC107733687,LOC107582526,LOC107708468,LOC107690155,LOC107678556)


Basic Information

Item Value
gene id wdr32
gene name wdr32,LOC107733687,LOC107582526,LOC107708468,LOC107690155,LOC107678556
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 5064298 ~ 5070193 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255792.1
GGAAACACGTAGTCTGTTGTGTGCGCGCATATCCGCAGCACTCTTGTGTTTGTATTAATGGATGTTTAAGCGGTTTCTGCACACGCTGCAAGACGGCCTGGCTCGCAGGTCCAGCGCCTGTCCGCGGACCGCAGGAGGGTGAGTTTGGGCGAGCCTCAAAACGGAGCCGCCGGTAACGCTCGTGCAACAATGAGCTCGGGACAGCCGAGCGACGGCGAGGAGCCGCGCGCAGATCCGCTgcgcgaggaggaggaggaggaggaagaggaagaggaggaggaggacagcGACGAAGACAGGTGCTCCAGCAAGCCGTCCTCTCCGCAGGCGGGCCGCGGGGGCGCCGGGACGCAGGGCGTCTGTAAGCTCGGGGCGGCCGCGGACGGCGGGACGAGCTCGGGGGGCAGGGGCTCGAGCGCCTGCGACTCTCTGTTCGCCTGGATCTGCGGGAGGACAGTCCGCAGGGGGCCGTTTGTGGACCCCGCGCGGGATCATTTCCGTACCATGACACGGCTTTATTCGTCCATGAGCCCGGCCGCGGATTCCGTGAACCTCAGTACAAAAACCCACGGAGCTGTCTTCAACTTGGAGTACTCTCCGGATGGgtCAGTGTTGACGGTTGCTTGTGAGCAGACAGAAGTGCTTTTGTTTGACCCCGTTTCTTCCAGACACATCAAAACCCTGGTGGAGGCTCACGAGGACTGCGTAAACAACATAAGGTTTCTCGATAACCGGCTGTTTGCGACCTGCTCTGATGACACCaccattgcattgtgggatttgCGTAAGCTCAACTCGAAGGTGTGCTCGCTGCACGGCCACGCCAGCTGGGTCAAGAACATCGAGTACGACACGCACACGCGCCTGCTGGTGACGTCAGGGTTTGACGGAAATGTCATCACGTGGGATACCAACAGGTTCACAGAGGATGGCTGTCCACACAAGAAGTTTTTCCACACACGCTATCTTATGAGGATGCGTCTGACTCCCGACTGCAGTAAGATGTTAATCTCCACCTCCTCTGGTTACCTCCTCATCTTACATGACCTTGATCTCACCCAGAGCCTTGAGGTGGGCAGCTACCGCATCCATCGCGCCCGCAGAGCTCCACTCAGCACAGaaggTTCATCGGCAGGTTCCCGGTCAGGAGGTTCCCGTCACACCATTGACAGCAAAACACATCCACACAGAGAGGGCCTGTCTCCCAGAAACAGTCTAGAGGTTTTAACCCCGGAGATCCCAGGCGAGAAGGATCGTGGGAACTGCATCACCTCCTTGCAACTGCACCCCAAAGGCTGGGCCACGTTGTTACGCTGCTCCAGCAACATGGACGACCAGGAGtGGACGTGCGTGTACGAGTTTCAAGAGGGCGCTCCTCCTCGACCCCCGGTGTCTCCTCGCTGCTCTCTGCGTCTCACGCACTACATCGAGGAGGCTAACGTCGGCCGAGGCTACATTAAGGAGCTGTGCTTCAGCCCGGACGGCCGGCTCATCTGCTCCCCGTACGGTTACGGCGTGCGCTTGCTGGCGTTCGACGAGCACTGCGCCGAGCTGGCGGACTGCATGCCTGTGCGGACGGCTCTGCTGAGGGAGATTCGCTCCATCTACTCTCACAGCGACGTGGTGCTCACCTCCAAGTTCTCACCCACTCACTGTCAGTTCGCATCGGGCTGCCTTAGCGGACGCGTAGCTCTGTATCAACCTCACTTTTAACATTCACTTACACTGATCGCTGGACTATTTGGAAGacgattctgattggtcgggCAGATAATGGGAGAACGAAACTACCTTaaacagagtgtgtgtgggtttttctttgtgtgtgtgtgtgtgcgtgtgtggggTCACACTGCATGTGAATGACCTTCTacatgtttgtcattttttttttttagatgtaattGTTCCGTATGCTGTGTAAACCTAACCGTACGTGCGAGAAGGAAAGGAAAATGCATTGGTTTTTCTCCACGATAGAGGCTGAACGAGTCACGTGAGCAATTAGAGAATTCTGGGagagtggttttttttttgtttgtttttttgcagcactGCAGTAACCGCTTCAAGCCAATCATTTTCACGCAACTGCGAGCAGTTCGAGCCGATggcaatttttgcattttgccaAACGTTTTAGACTTTGCAATGCCATATTcgttttcagaaacattttatttctggaaGCGCGTCACTTTTACTAAtcgtttgttttaattttggacTGCTTGTCTGTAATAACACTGAGGTCCGATTCATAGATTGTCAATGCAGTATGTACCATGTACGTGTGAGTGAGTATTGGGATGAATACGACTTCTGCTGATAGTTGACTGAATGGACTGggaattttgtaatgtttttcatatGCTTCTGGCCTCTACGTGGACAATCAGCAGTTATGAAATGTTTAGATGCTCGCATCGTTGGGAGCTTTGAACTTGAACGTGAGGATGATGGGAGAAGGGCGGGTTTAATTGTTGGATGAGTGTTTTATACGGATGAGTTTAGctttcttaaaatgaaaacgagGACAAAATCTGAATGTTCGGCTTTTCTGGGACTAGTATCAGTTAGTCATCCTTCTcggttattaaaatattgacaaaGTTACCTTTATCCTCCACGATTCTCATTCGATTCACTTTATTCATGTTAATAACACTAAGGATGCAGTGGTACAGATATATTGAATAAAGAAACCCTTTTCATA
>XM_043255793.1
CGGAAACACGTAGTCTGTTGTGTGCGCGCATATCCGCAGCACTCTTGTGTTTGTATTAATGGATGTTTAAGCGGTTTCTGCACACGCTGCAAGACGGCCTGGCTCGCAGGTCCAGCGCCTGTCCGCGGACCGCAGGAGGGTGAGTTTGGGCGAGCCTCAAAACGGAGCCGCCGGTAACGCTCGTGCAACAATGAGCTCGGGACAGCCGAGCGACGGCGAGGAGCCGCGCGCAGATCCGCTgcgcgaggaggaggaggaggaggaagaggaagaggaggaggaggacagcGACGAAGACAGGTGCTCCAGCAAGCCGTCCTCTCCGCAGGCGGGCCGCGGGGGCGCCGGGACGCAGGGCGTCTGTAAGCTCGGGGCGGCCGCGGACGGCGGGACGAGCTCGGGGGGCAGGGGCTCGAGCGCCTGCGACTCTCTGTTCGCCTGGATCTGCGGGAGGACAGTCCGCAGGGGGCCGTTTGTGGACCCCGCGCGGGATCATTTCCGTACCATGACACGGCTTTATTCGTCCATGAGCCCGGCCGCGGATTCCGTGAACCTCAGTACAAAAACCCACGGAGCTGTCTTCAACTTGGAGTACTCTCCGGATGGgtCAGTGTTGACGGTTGCTTGTGAGCAGACAGAAGTGCTTTTGTTTGACCCCGTTTCTTCCAGACACATCAAAACCCTGGTGGAGGCTCACGAGGACTGCGTAAACAACATAAGGTTTCTCGATAACCGGCTGTTTGCGACCTGCTCTGATGACACCaccattgcattgtgggatttgCGTAAGCTCAACTCGAAGGTGTGCTCGCTGCACGGCCACGCCAGCTGGGTCAAGAACATCGAGTACGACACGCACACGCGCCTGCTGGTGACGTCAGGGTTTGACGGAAATGTCATCACGTGGGATACCAACAGGTTCACAGAGGATGGCTGTCCACACAAGAAGTTTTTCCACACACGCTATCTTATGAGGATGCGTCTGACTCCCGACTGCAGTAAGATGTTAATCTCCACCTCCTCTGGTTACCTCCTCATCTTACATGACCTTGATCTCACCCAGAGCCTTGAGGTGGGCAGCTACCGCATCCATCGCGCCCGCAGAGCTCCACTCAGCACAGgTTCATCGGCAGGTTCCCGGTCAGGAGGTTCCCGTCACACCATTGACAGCAAAACACATCCACACAGAGAGGGCCTGTCTCCCAGAAACAGTCTAGAGGTTTTAACCCCGGAGATCCCAGGCGAGAAGGATCGTGGGAACTGCATCACCTCCTTGCAACTGCACCCCAAAGGCTGGGCCACGTTGTTACGCTGCTCCAGCAACATGGACGACCAGGAGtGGACGTGCGTGTACGAGTTTCAAGAGGGCGCTCCTCCTCGACCCCCGGTGTCTCCTCGCTGCTCTCTGCGTCTCACGCACTACATCGAGGAGGCTAACGTCGGCCGAGGCTACATTAAGGAGCTGTGCTTCAGCCCGGACGGCCGGCTCATCTGCTCCCCGTACGGTTACGGCGTGCGCTTGCTGGCGTTCGACGAGCACTGCGCCGAGCTGGCGGACTGCATGCCTGTGCGGACGGCTCTGCTGAGGGAGATTCGCTCCATCTACTCTCACAGCGACGTGGTGCTCACCTCCAAGTTCTCACCCACTCACTGTCAGTTCGCATCGGGCTGCCTTAGCGGACGCGTAGCTCTGTATCAACCTCACTTTTAACATTCACTTACACTGATCGCTGGACTATTTGGAAGacgattctgattggtcgggCAGATAATGGGAGAACGAAACTACCTTaaacagagtgtgtgtgggtttttctttgtgtgtgtgtgtgtgcgtgtgtggggTCACACTGCATGTGAATGACCTTCTacatgtttgtcattttttttttttagatgtaattGTTCCGTATGCTGTGTAAACCTAACCGTACGTGCGAGAAGGAAAGGAAAATGCATTGGTTTTTCTCCACGATAGAGGCTGAACGAGTCACGTGAGCAATTAGAGAATTCTGGGagagtggttttttttttgtttgtttttttgcagcactGCAGTAACCGCTTCAAGCCAATCATTTTCACGCAACTGCGAGCAGTTCGAGCCGATggcaatttttgcattttgccaAACGTTTTAGACTTTGCAATGCCATATTcgttttcagaaacattttatttctggaaGCGCGTCACTTTTACTAAtcgtttgttttaattttggacTGCTTGTCTGTAATAACACTGAGGTCCGATTCATAGATTGTCAATGCAGTATGTACCATGTACGTGTGAGTGAGTATTGGGATGAATACGACTTCTGCTGATAGTTGACTGAATGGACTGggaattttgtaatgtttttcatatGCTTCTGGCCTCTACGTGGACAATCAGCAGTTATGAAATGTTTAGATGCTCGCATCGTTGGGAGCTTTGAACTTGAACGTGAGGATGATGGGAGAAGGGCGGGTTTAATTGTTGGATGAGTGTTTTATACGGATGAGTTTAGctttcttaaaatgaaaacgagGACAAAATCTGAATGTTCGGCTTTTCTGGGACTAGTATCAGTTAGTCATCCTTCTcggttattaaaatattgacaaaGTTACCTTTATCCTCCACGATTCTCATTCGATTCACTTTATTCATGTTAATAACACTAAGGATGCAGTGGTACAGATATATTGAATAAAGAAACCCTTTTCATA

Function

symbol description
wdr32 Predicted to be involved in protein ubiquitination. Predicted to be part of Cul4-RING E3 ubiquitin ligase complex. Orthologous to human DCAF10 (DDB1 and CUL4 associated factor 10).

NR:

description
DDB1- and CUL4-associated factor 10

GO: NA

KEGG:

id description
K11802 DCAF10; DDB1- and CUL4-associated factor 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255792.1 True 2716 mRNA 0.52 7 5064298 5070192
XM_043255793.1 False 2714 mRNA 0.52 7 5064298 5070193

Neighbor

gene id symbol gene type direction distance location
slf2 LOC107690156,LOC107582525,LOC107678590,LOC107567840 coding downstream 10256 5040564 ~ 5054042 (-)
sema4ga sema4ga,LOC107690158,LOC107582524,LOC107733683,LOC107678493,LOC107708465 coding downstream 23789 5008572 ~ 5040509 (-)
ninl ninl,LOC107708420,LOC107589549,LOC107699311,LOC107727377,LOC107582480,LOC107678585 coding downstream 108505 4931419 ~ 4955793 (-)
gbf1 gbf1,LOC107708418 coding downstream 160206 4837778 ~ 4904092 (-)
hells hells,LOC107727385,LOC107586490,LOC107699304,LOC107708407,LOC107678596,LOC107589556 coding downstream 392048 4626388 ~ 4672250 (-)
pomk pomk,LOC107733691,LOC107582561,LOC107678554,LOC107567859,LOC107708470 coding upstream 732 5070925 ~ 5073955 (-)
zgc:123321 LOC107582562,LOC107733692,LOC107690194,LOC107678492,LOC107708471 coding upstream 6503 5076696 ~ 5079826 (-)
bbof1 LOC107690193,LOC107582564,LOC107733688 coding upstream 10255 5080448 ~ 5085525 (-)
alms1 LOC107690154,LOC107733682,LOC107582553 coding upstream 15644 5085837 ~ 5097829 (-)
loxl3b loxl3b,LOC107690148,LOC107708481,LOC107678544,LOC107733697,LOC108263239 coding upstream 65839 5136032 ~ 5152932 (-)
G91025 NA non-coding downstream 99339 4964602 ~ 4964959 (-)
G91022 NA non-coding downstream 104887 4958383 ~ 4959411 (-)
G90846 NA non-coding downstream 231154 4829751 ~ 4833144 (-)
G90842 NA non-coding downstream 313330 4750432 ~ 4750968 (-)
G90785 NA non-coding downstream 479337 4560776 ~ 4584961 (-)
LOC122356716 NA non-coding upstream 58319 5128512 ~ 5129707 (-)
G91066 NA non-coding upstream 60158 5130351 ~ 5130949 (-)
G91085 NA non-coding upstream 190872 5261065 ~ 5262123 (-)
G91210 fgfr3,LOC107733743,LOC108263592 non-coding upstream 661063 5731256 ~ 5732678 (-)
LOC122356110 NA non-coding upstream 856800 5926993 ~ 5929491 (-)
col13a1 col13a1,LOC107678564,LOC107708413,LOC107589579,LOC107727372,LOC107586491 other downstream 284566 4690882 ~ 4779732 (-)
LOC122356061 LOC107699307,LOC107586507,LOC107708387,LOC108442385,LOC108263686,LOC107727357,LOC106576682,LOC104955882 other downstream 375130 4672966 ~ 4689168 (-)
hcar1-3 LOC107590023,LOC107678489,LOC107707144,LOC107699282,LOC107586503,LOC107736563 other downstream 1008885 4052743 ~ 4055413 (-)
wu:fj16a03 NA other downstream 1108343 3951763 ~ 3955955 (-)
timm23b timm23b,timm23a,LOC107565600,LOC107669571,LOC107739474,LOC108263229,LOC108426535 other downstream 1628718 3422753 ~ 3435580 (-)
metap1 metap1,LOC107556924,LOC107733733,LOC107695030 other upstream 850309 5920502 ~ 5926677 (-)
gng2 gng2,gbg2,LOC107569409 other upstream 991492 6061685 ~ 6073197 (-)
LOC122356805 LOC107666373,LOC107587882 other upstream 1149982 6220175 ~ 6227272 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other upstream 1288008 6358201 ~ 6396426 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other upstream 1383338 6453531 ~ 6499573 (-)

Expression


Co-expression Network