pprc1 (pprc1,LOC107666421,LOC107747555,LOC107569410,LOC107667059,LOC107733763,LOC107585240)


Basic Information

Item Value
gene id pprc1
gene name pprc1,LOC107666421,LOC107747555,LOC107569410,LOC107667059,LOC107733763,LOC107585240
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 6078217 ~ 6087501 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255826.1
GTCGGTTCGGTTGCCGGGAACGCAAATAGCACGTGGCCTGTAGCCGGCTGCTGCGCCTGCATTGATTCACGTTTTTCCACACAGTTGAGTTGTAAGATGGCGGCGCGGTGGGGAACAGGCGAGGAGATGTTAAAAGCCTGTAATGCTCAAATGTTCTCGCCGGTGAATCTTGACGAGGTAGAAAGCTTCGCTGCCAGCTGTCTGGAGTATCCTGGCCTTAGCAATGGAGATGCTCTGGAGGCTTTACAAGGCTGCCTTGATCCTTCTATTTTGTCCATTTTTGAAGACAGCCCCACTGGAGAAGTTAAAAGTAATATCGATGAGGAAAGTGAAGCGACACTGCTCACAGCTCTCACTGAAATACTTGACAATGTTGATGATGAAAACTTGTCCCCTTTTGACACCCTGCCGGATTCAGACCTGTTCTCGGGTCAGAAGGGTCAGGAACATTCACCACTAAGAAAGTTCCTCACACGGTCTCCTCCAGAGTCAATGATTTACACAAGACAGTTTCCTGGGAAGagtCTCCCGCGAATGCAAAGAGTGTCCCAGCAGAACAGTGAAGGAGAAGAGGAAGATGGAGACACTAGTTTTTCAACCCCAATAGCCAATATTGATTTGTCATCACTGGATGAATTTGACTGGTGCCTTCCTGTGTCATTAGAGCAGGATGGAGAGAGCATGCCTGTCACTCTCAGTGATTTAGTAAAACACATGCACCCTTACTGCATGACATTGTGTGTAGAAGGAGAAGAGGGCCAAGAGCATCTTCTGCCCGAGAGGGGCTTAGTGTTAGAAGTGGTTGATCAAGGAGAGCACGGAGAGCCCATCCTAGCAATCCCAGATCTCAGCATCCCTCTTCCTCACACAGACTCTGCAGAAGGTGAACAAAGAGTCCCCGAGAATAGCATAGACAAACCAGAACCCAAGCCTGAAAAAGTCCCACCTCCTTCTACAGTATCTCCTGTGGAGGAGGAGAAAAAGGCTGTCAAGGTAcgtaaagagaaaaagaaaagtaaactaCTTGAAGCCCCTCCTGTTGAACAGAGAGTTTTAAGAAGCTCAAAACTTAAGGAAGAGCCACAGAAGAAACGCccggaagaacaaaagaagaaaaaggtgaCTTTCTCACCTGTGCTCTCATTAGCAGTGCCCAAAAACCCTAAACTTGATCGTCCTACAGAGATGACAACCCTTAAACCGCAGGTTGAGAAGGAGCATATCCCAATGCCTCAAGCTGAAGCAAAGAAAACTGACTCACAGCCAGAGAACAAACCTCTTGAAAAATCAGTGGAGGAAGAACCACCCTCAAAAGAAGAGCCTGTTAGCGAACAGCCTGCTGTTTGTCAGCGTAATGAAATTAAGCCCAAGCCTCTCAGTTTACAGCAGTACCGTCTCCTTCGCCAACAGAAAAAACCGGATCCTGTGGACAAAACGGAGGATTACAGCACTAAATGGCCCAAGTTGCCTGAAACTCCCAAGGAGCTTCCCCCAATACCCTGCCTGCCTGACCCCAACCCCAGAGATCCACGAAAAACTACGCATACTCCTGTTAAAAAAGACCTTGCACCTGAAATCATGCCTGCATGGCACCCGAGAGGCCCTGCTGCTCCCCCAACGCCTGAAGCCTTGCTCATCCCACCGGCCTCACTGATAGCTTCCTCTAAGAAACCTGCAGCTGCTAAACCAACCCCTCCACCTTCTGAAACATCTAAAAGTTCACCTCAATCAGTCCACCCCTCACCCCAGAAACTACCTGTTCCCATCGGTGTGCCACAAAACACTAATCATACTGAGTCCTCTACCCCCATTAGACATGTGTCTGAAGTGGCCCCTGAAAGGACCGTTTCATTGTCAGTGTCTACTACATCTGGAGGCCCTCAAGGTCTTAATGCACATAAGGAATGTTTACATGGGGACCTCAGTGTTGCTCCCGCAAAGCCTCAGATGGTCACTACACAAGTCCAGAGCTCAAACTCTAGCCCTCATAAACCTCGTGTTGCTGTGCCTCTGAAGAGAGAGACCGAGCAGGTTGTTTTGGCCCCTGTGTCAGATCAAGCCAAAAACACCCTGCCAACTAGTTCTAAAAAGCTGACCTCACGGTCACAGCCTCATGTTGCACCAATAGCTGCTCAGCCGTTTTTCTCGGCTCAAGTTCAGGCCAGAGTTGTTGAACTGGCAGAGCAGATGAGGATGGCTTCCTCTGATATCCCCAAACCGAAGAACACCACAGTTGAGCTGATTGAATCCTTCACAAGTGAAATTGgtaTTGAAGCTGCTGATCTTACAAGCCTCTTGGAGCAGTTTGAGGAGTCTCAGTCCAAAGAAGAGCAGAGTGTACCGGAGGTCTGTGGTAGAGCAGCCGCTGTAGGAAACTCCAGTTCAGATCAGCAGGTGGAAACTAAAGCAGTGGAGAAAATCCGCAACCATGACCTGGGAAGCACAGCAGGCCTTACACCTCCTGCTACGCCCCCACACCAGATGTGGAAGCCTATAGCACCAGTTTCATTACTGGGGAAAACCAAAAAGCCAGAGGTCCTTAAAGCAACACCTAACAAGGCCATTCAAATAGAGGCAAGGCCACTACCATCAAATAAGCTGCGCAGCAAGCCTCAGAGCCCCACTACTACTGGACAGACTCAGCCTTTCTCCCTTGATCATGACTACTGCCTCCCTCCAAAAGAAGATGGTCAAAACGAAGTTGGCAGTCGGTGGAATGTCAAACAACAGCCTAGCATCATAATCAAGACGGTTGAGCTGCCGGCCAGCAAGCCAGCCCAGAGCAGCATCTCCAAAGCTCCAACTGCTCTTTCAGCTACAGAAGGAACCCAGAAAAATGTTAGCCTCGGTCAAACTTCTACAGATACGAGGTGCACATTAAATAGCTCCGCCATGGAGACTCCAGACGCCTCTCCAAGCAGGCCTGACCCTGAGAGCTCTTTACTGGATGATGCAAAATGCGACCAGCAGAAATCTGCAAACTACTCTGAGTGTTCCTCTAGACAGTACCAGGAGGACAGGGGCCGCTCGAAGCGAAGATACAGAGCCCAGTCCTCCAGTAGCTCAGAATCCAGCTCCGAGTCCTCCTCCAGATCACGTTCACCACCCAGTAAAAGATACAGGTCTCGTCGCTCAAGCAGCAGATCCAGTTCTTCATCTCGGTCTCGTTCCCGATCCAGCTCGAGGTCATTTTCCCCGCCCCGCCGGCGACGGTTTTCATATTCAAGTTCACGCTCTGGATCCTGGAGCCGCAGCCGCTCTCGATCCAGATCCCGCTCCTCTGACATTGGACATCAGCGCTGGAAAAGCCACAGAAGCCCTAATCAGACATCTGTTTACCGGTATTCACAAAATCCCAGAGAGGATTCAAAAAGAGGCAAGGAGAAAGCAATTGAGGAGCGAAGAGTTGTTTATGTTGGACGGATTCGTGGAAGCATGACTCGTAAAGAGCTGAAGGAACGCTTCTCATTCTTCGGAAAGATTGAGGAGTGCACTGTGCACTTTAGAGAAAATGGGGACAACTACGGCTTTGTTACATACTACAGCACGAAGGATGCATTTAATGCCATTGAGAACGGAAGCAAGCTGAGGGAGCAGAATGAGCTTCCTTTTGACCTGTGCTTTGGAGGCAGGAGACAGTTCTGCAAAACCAGTTATGCTGATTTAGattcaaaCCGGGAGTACGAACCCCATCCTACAAAAGGCAAATTTGATGCACTAGACTTTGACACTTTACTCAAACAGGCTCAAAAGAACCTGAAAAGGTAACGATTAGTCAAGCGGCAAGAGAGACGAACGATTACCTCTGAGCAAAATGCTGCCCCACACTTCCAGTGTTGCCtctcaattattatttttggttgtttttgtttgttttttttctttgtgtttttgtttgtttctgcaaGTTTACACCTTCTATTGAAGTGAAGATTTGTAAGAAAAAcctaaagtgcaaaaaaaaaaaaaaagaaatctaataaAACTGTGGaatgaaatagaattttttaaaaggattaactttatttaaatgtttaatctgaATTGCTGAATgttggatacatttttaaatgagctgAATGGAAACATTATGTTGGGGGAAAACAGGTTTACCATGCTGAATTTATTTCAACCTAAATAAACCTGAGATAAATTGTCTTGTCTGAGATTAAAAA
>XM_043255828.1
CGAGGTAAGACCATCACGCGTCGATACTCAGAGAGCGTCGCGCCGGAATGAAAAGGTTGACATTTATCGCGCTCGAGGCAAATGCGCGATGATGTGCGGGACTTTGTGACACGTGGATGGCGATGGTAGAAAGCTTCGCTGCCAGCTGTCTGGAGTATCCTGGCCTTAGCAATGGAGATGCTCTGGAGGCTTTACAAGGCTGCCTTGATCCTTCTATTTTGTCCATTTTTGAAGACAGCCCCACTGGAGAAGTTAAAAGTAATATCGATGAGGAAAGTGAAGCGACACTGCTCACAGCTCTCACTGAAATACTTGACAATGTTGATGATGAAAACTTGTCCCCTTTTGACACCCTGCCGGATTCAGACCTGTTCTCGGGTCAGAAGGGTCAGGAACATTCACCACTAAGAAAGTTCCTCACACGGTCTCCTCCAGAGTCAATGATTTACACAAGACAGTTTCCTGGGAAGagtCTCCCGCGAATGCAAAGAGTGTCCCAGCAGAACAGTGAAGGAGAAGAGGAAGATGGAGACACTAGTTTTTCAACCCCAATAGCCAATATTGATTTGTCATCACTGGATGAATTTGACTGGTGCCTTCCTGTGTCATTAGAGCAGGATGGAGAGAGCATGCCTGTCACTCTCAGTGATTTAGTAAAACACATGCACCCTTACTGCATGACATTGTGTGTAGAAGGAGAAGAGGGCCAAGAGCATCTTCTGCCCGAGAGGGGCTTAGTGTTAGAAGTGGTTGATCAAGGAGAGCACGGAGAGCCCATCCTAGCAATCCCAGATCTCAGCATCCCTCTTCCTCACACAGACTCTGCAGAAGGTGAACAAAGAGTCCCCGAGAATAGCATAGACAAACCAGAACCCAAGCCTGAAAAAGTCCCACCTCCTTCTACAGTATCTCCTGTGGAGGAGGAGAAAAAGGCTGTCAAGGTAcgtaaagagaaaaagaaaagtaaactaCTTGAAGCCCCTCCTGTTGAACAGAGAGTTTTAAGAAGCTCAAAACTTAAGGAAGAGCCACAGAAGAAACGCccggaagaacaaaagaagaaaaaggtgaCTTTCTCACCTGTGCTCTCATTAGCAGTGCCCAAAAACCCTAAACTTGATCGTCCTACAGAGATGACAACCCTTAAACCGCAGGTTGAGAAGGAGCATATCCCAATGCCTCAAGCTGAAGCAAAGAAAACTGACTCACAGCCAGAGAACAAACCTCTTGAAAAATCAGTGGAGGAAGAACCACCCTCAAAAGAAGAGCCTGTTAGCGAACAGCCTGCTGTTTGTCAGCGTAATGAAATTAAGCCCAAGCCTCTCAGTTTACAGCAGTACCGTCTCCTTCGCCAACAGAAAAAACCGGATCCTGTGGACAAAACGGAGGATTACAGCACTAAATGGCCCAAGTTGCCTGAAACTCCCAAGGAGCTTCCCCCAATACCCTGCCTGCCTGACCCCAACCCCAGAGATCCACGAAAAACTACGCATACTCCTGTTAAAAAAGACCTTGCACCTGAAATCATGCCTGCATGGCACCCGAGAGGCCCTGCTGCTCCCCCAACGCCTGAAGCCTTGCTCATCCCACCGGCCTCACTGATAGCTTCCTCTAAGAAACCTGCAGCTGCTAAACCAACCCCTCCACCTTCTGAAACATCTAAAAGTTCACCTCAATCAGTCCACCCCTCACCCCAGAAACTACCTGTTCCCATCGGTGTGCCACAAAACACTAATCATACTGAGTCCTCTACCCCCATTAGACATGTGTCTGAAGTGGCCCCTGAAAGGACCGTTTCATTGTCAGTGTCTACTACATCTGGAGGCCCTCAAGGTCTTAATGCACATAAGGAATGTTTACATGGGGACCTCAGTGTTGCTCCCGCAAAGCCTCAGATGGTCACTACACAAGTCCAGAGCTCAAACTCTAGCCCTCATAAACCTCGTGTTGCTGTGCCTCTGAAGAGAGAGACCGAGCAGGTTGTTTTGGCCCCTGTGTCAGATCAAGCCAAAAACACCCTGCCAACTAGTTCTAAAAAGCTGACCTCACGGTCACAGCCTCATGTTGCACCAATAGCTGCTCAGCCGTTTTTCTCGGCTCAAGTTCAGGCCAGAGTTGTTGAACTGGCAGAGCAGATGAGGATGGCTTCCTCTGATATCCCCAAACCGAAGAACACCACAGTTGAGCTGATTGAATCCTTCACAAGTGAAATTGgtaTTGAAGCTGCTGATCTTACAAGCCTCTTGGAGCAGTTTGAGGAGTCTCAGTCCAAAGAAGAGCAGAGTGTACCGGAGGTCTGTGGTAGAGCAGCCGCTGTAGGAAACTCCAGTTCAGATCAGCAGGTGGAAACTAAAGCAGTGGAGAAAATCCGCAACCATGACCTGGGAAGCACAGCAGGCCTTACACCTCCTGCTACGCCCCCACACCAGATGTGGAAGCCTATAGCACCAGTTTCATTACTGGGGAAAACCAAAAAGCCAGAGGTCCTTAAAGCAACACCTAACAAGGCCATTCAAATAGAGGCAAGGCCACTACCATCAAATAAGCTGCGCAGCAAGCCTCAGAGCCCCACTACTACTGGACAGACTCAGCCTTTCTCCCTTGATCATGACTACTGCCTCCCTCCAAAAGAAGATGGTCAAAACGAAGTTGGCAGTCGGTGGAATGTCAAACAACAGCCTAGCATCATAATCAAGACGGTTGAGCTGCCGGCCAGCAAGCCAGCCCAGAGCAGCATCTCCAAAGCTCCAACTGCTCTTTCAGCTACAGAAGGAACCCAGAAAAATGTTAGCCTCGGTCAAACTTCTACAGATACGAGGTGCACATTAAATAGCTCCGCCATGGAGACTCCAGACGCCTCTCCAAGCAGGCCTGACCCTGAGAGCTCTTTACTGGATGATGCAAAATGCGACCAGCAGAAATCTGCAAACTACTCTGAGTGTTCCTCTAGACAGTACCAGGAGGACAGGGGCCGCTCGAAGCGAAGATACAGAGCCCAGTCCTCCAGTAGCTCAGAATCCAGCTCCGAGTCCTCCTCCAGATCACGTTCACCACCCAGTAAAAGATACAGGTCTCGTCGCTCAAGCAGCAGATCCAGTTCTTCATCTCGGTCTCGTTCCCGATCCAGCTCGAGGTCATTTTCCCCGCCCCGCCGGCGACGGTTTTCATATTCAAGTTCACGCTCTGGATCCTGGAGCCGCAGCCGCTCTCGATCCAGATCCCGCTCCTCTGACATTGGACATCAGCGCTGGAAAAGCCACAGAAGCCCTAATCAGACATCTGTTTACCGGTATTCACAAAATCCCAGAGAGGATTCAAAAAGAGGCAAGGAGAAAGCAATTGAGGAGCGAAGAGTTGTTTATGTTGGACGGATTCGTGGAAGCATGACTCGTAAAGAGCTGAAGGAACGCTTCTCATTCTTCGGAAAGATTGAGGAGTGCACTGTGCACTTTAGAGAAAATGGGGACAACTACGGCTTTGTTACATACTACAGCACGAAGGATGCATTTAATGCCATTGAGAACGGAAGCAAGCTGAGGGAGCAGAATGAGCTTCCTTTTGACCTGTGCTTTGGAGGCAGGAGACAGTTCTGCAAAACCAGTTATGCTGATTTAGattcaaaCCGGGAGTACGAACCCCATCCTACAAAAGGCAAATTTGATGCACTAGACTTTGACACTTTACTCAAACAGGCTCAAAAGAACCTGAAAAGGTAACGATTAGTCAAGCGGCAAGAGAGACGAACGATTACCTCTGAGCAAAATGCTGCCCCACACTTCCAGTGTTGCCtctcaattattatttttggttgtttttgtttgttttttttctttgtgtttttgtttgtttctgcaaGTTTACACCTTCTATTGAAGTGAAGATTTGTAAGAAAAAcctaaagtgcaaaaaaaaaaaaaaagaaatctaataaAACTGTGGaatgaaatagaattttttaaaaggattaactttatttaaatgtttaatctgaATTGCTGAATgttggatacatttttaaatgagctgAATGGAAACATTATGTTGGGGGAAAACAGGTTTACCATGCTGAATTTATTTCAACCTAAATAAACCTGAGATAAATTGTCTTGTCTGAGATTAAAAA

Function

symbol description
pprc1 Predicted to enable nuclear receptor coactivator activity. Predicted to be involved in positive regulation of DNA-binding transcription factor activity and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in several structures, including alar plate midbrain region; anterior axial hypoblast; brain; immature eye; and mesoderm. Orthologous to human PPRC1 (PPARG related coactivator 1).

NR:

description
PREDICTED: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K17963 PPRC1, PRC; peroxisome proliferator-activated receptor gamma coactivator-related protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255826.1 True 4175 mRNA 0.47 14 6078217 6087501
XM_043255828.1 False 4123 mRNA 0.47 14 6078390 6087501

Neighbor

gene id symbol gene type direction distance location
LOC122357047 enpep,LOC107747565,LOC107666571,LOC107585235,LOC107667073,LOC107733706 coding upstream 131315 5936401 ~ 5946902 (+)
lrit3b lrit3b,LOC107556923,LOC107666384 coding upstream 142633 5930197 ~ 5935584 (+)
nsd2 LOC107747575,LOC107666517,LOC107556918,LOC107733764 coding upstream 270341 5795240 ~ 5807876 (+)
fgfr3 fgfr3,LOC107733743,LOC107666479,LOC107556915 coding upstream 337327 5708521 ~ 5740890 (+)
ky LOC107666377,LOC107747591,LOC107556906,LOC107733664,LOC107695013,LOC107568638 coding upstream 503784 5567502 ~ 5574433 (+)
oga mgea5,LOC107666422,LOC107585241,LOC107667060 coding downstream 1451 6088952 ~ 6101193 (+)
npm3 npm3,LOC107666424,LOC107569414,LOC107747554,LOC107667062,LOC107585242,LOC107733732 coding downstream 14130 6101631 ~ 6103986 (+)
arl3a arl3,zgc:110197,LOC108263849,LOC103033567,LOC107733731,LOC107747553,LOC107667061,LOC103145158 coding downstream 16625 6104126 ~ 6107776 (+)
zmp:0000000662 zmp:0000000662,LOC107666523,LOC107747548,LOC107733769,LOC107667074,LOC107585245,LOC108421699,LOC108263473,LOC107569423 coding downstream 65242 6152743 ~ 6159313 (+)
ube2d3 ube2d3,ube2d2,UBE2D2,ube2d1,LOC107585246,LOC108263550,LOC106611705,LOC105029919,LOC105015883 coding downstream 72877 6160378 ~ 6165669 (+)
G91250 gabrb1,LOC106937613 non-coding upstream 76155 5998442 ~ 6002062 (+)
G91172 NA non-coding upstream 121619 5954891 ~ 5956598 (+)
G91180 NA non-coding upstream 150084 5927834 ~ 5928133 (+)
G91179 NA non-coding upstream 151469 5926358 ~ 5926748 (+)
G91178 NA non-coding upstream 151892 5924540 ~ 5926325 (+)
G91324 NA non-coding downstream 282709 6370210 ~ 6370528 (+)
G91343 NA non-coding downstream 365243 6452744 ~ 6453076 (+)
G91492 NA non-coding downstream 606161 6693662 ~ 6699169 (+)
LOC122356144 NA non-coding downstream 635779 6723280 ~ 6755554 (+)
G91529 NA non-coding downstream 727509 6815010 ~ 6861516 (+)
commd8 commd8,LOC107666485,LOC107556927,LOC107733703,LOC107585230 other upstream 91238 5982518 ~ 5986979 (+)
lamtor3 lamtor3 other upstream 125700 5951217 ~ 5952517 (+)
ap5s1 ap5s1,LOC107693289,LOC107678575,LOC107718444,LOC107567857,LOC107582535,LOC107733789 other upstream 806970 5261036 ~ 5271247 (+)
rab11fip5a LOC107733767,LOC107690145,LOC107582533 other upstream 879813 5177718 ~ 5198404 (+)
si:ch73-49p17.1 LOC107678601,LOC107727381,LOC107589548,LOC107708422 other upstream 1080226 4992153 ~ 4997991 (+)
akt3a akt3a,akt3,LOC107587843,LOC107666464,LOC107585250,LOC107666430,LOC103024575,LOC108422057,LOC106589689 other downstream 167102 6254603 ~ 6358017 (+)
LOC122356719 LOC107585299,LOC107733725,LOC107698728,LOC107711427,LOC107666365,LOC107711426,LOC107585285,LOC107733707 other downstream 1005643 7093144 ~ 7147218 (+)
sh2d4ba sh2d4ba,LOC107713884,LOC107666399,LOC107565924,LOC107743625,LOC107696870 other downstream 1684059 7771560 ~ 7787307 (+)
chchd1 LOC107713887,LOC107565922,LOC107743624,LOC107696882,LOC107666381,LOC107555316 other downstream 1748679 7836180 ~ 7838945 (+)
zswim8 LOC107666425,LOC107565928,LOC107713895,LOC107743573 other downstream 1771197 7858698 ~ 7886690 (+)

Expression


Co-expression Network