LOC122356780


Basic Information

Item Value
gene id LOC122356780
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 20025669 ~ 20036473 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255833.1
GAGATTTGAGCAGACGTTGGGTGCATGTGGAGTTTTGCTCTCTGCGGCGCTGTAAACGGTTTACTCATGCAGACGCCTCAGACGCTCGCTGCAGACAGAAGGCCGAGCTCAGCAGGAGCCTGGAGGATGAAAGCTGGTTTCCATGGAAACGACGGAATCCAATTAAAAGGGCCATTGGTACCAAAGCAGCCCGAAACACGGAACAAGGAAACCCCGAACTATTTATCATTCGGTTTCGAGCTGTCCTTCAGGTGCCGGAGAATAATCAGGGAGAGGAGTTCGAGCTCTCCGCCAGGACAGAGTGATGTTTATGATGATCAACAATCAGCAGAGGATGGACAAGCAGCCTTGAGGATCAAACACTGGAGAGGACACTTGAAAAACAGCCTTTCGAAAGTCGAGTTTGGAGGATGCTCACCGGTTTTGGGTGAAGACACTAATTGCTTTGACAGTGTTCACCAGGCCAACTCTGAACAGCGTCCTCTCGCATCCGTGCATCACCGAGGCATCGGTTCGGAGGAGAGCGCGAGGTCAGGAGCGCTGGCCGCCGCGgagttgccatggcaaccgctCCACAGCCAAAAAGCAGCTGCGGCGTTCTCTCCTTCTGAAAGGGCTTGTGCAGAGAAGAACGATTCGATTTCGAACCCGAACGATGGGCTTCGTACAAATCGACCCGTTTCGGGAGGCGGGGCTTGGAGGAGAAGcgataatATTGCCTGGGAAACACAACAGTGTCTGCGCCGGCTGCTCCGCTCGGAGATAACAGCGTGTCATCAGAGCGCTGGCGTCATTTGGCTCCGGATGGGACCGTGCAACTCGATCCACCTTTAAATGGAGCGAGACAAAGACTCAGCGTTGGGTTTCCATCACATCAGCGTTTAGATGCCTTGGTGAGGGTGCAGGATCGAGTTTGACCAGCCTGTCCAGCCTGAAGAGCAACTACAGAGACGTATGCAAACATGAGTCCCAGCCGTCACCTGATCGTTACGGCCGTCTGATGAAGCAGGTGTTGATGGGAGGTTTGGGCGGCGCTCTGTGGGTGTGTCGCCCTCAGCtttccaagaaaaaaaagggcCGGGCGATTTCTGTGTGATCAGGGTGATGAAAGACCGAAAGGATGACTCAGTCCGGTTTCAATGCAGACGTTTACAATTTACAAAGAGCACTGCGTTAAAGAGGCAGCGTCAAATATTACGACCAATCTGAAGACTGTAAACTAACTCtaatcattaaaatagttcaaatactgtacattttataaaaccaGTTGCCTTGACAACTAACTGAAATGATCTGAATTTAAACTAAAagtctgaaatgaaaatgtactaatgctaaaaatagtaataattataaaaaaaaacc
>XM_043255834.1
GAGATTTGAGCAGACGTTGGGTGCATGTGGAGTTTTGCTCTCTGCGGCGCTGTAAACGGTTTACTCATGCAGACGCCTCAGACGCTCGCTGCAGACAGAAGGCCGAGCTCAGCAGGAGCCTGGAGGATGAAAGCTGGTTTCCATGGAAACGACGGAATCCAATTAAAAGGGCCATTGGTACCAAAGCAGCCCGAAACACGGAACAAGGAAACCCCGAACTATTTATCATTCGGTTTCGAGCTGTCCTTCAGGTGCCGGAGAATAATCAGGGAGAGGAGTTCGAGCTCTCCGCCAGGACAGAGTGATGTTTATGATGATCAACAATCAGCAGAGGATGGACAAGCAGCCTTGAGGATCAAACACTGGAGAGGACACTTGAAAAACAGCCTTTCGAAAGTCGAGTTTGGAGGATGCTCACCGGTTTTGGGTGAAGACACTAATTGCTTTGACAGTGTTCACCAGGCCAACTCTGAACAGCGTCCTCTCGCATCCGTGCATCACCGAGGCATCGGTTCGGAGGAGAGCGCGAGGTCAGGAGCGCTGGCCGCCGCGgagttgccatggcaaccgctCCACAGCCAAAAAGCAGCTGCGGCGTTCTCTCCTTCTGAAAGGGCTTGTGCAGAGAAGAACGATTCGATTTCGAACCCGAACGATGGGCTTCGTACAAATCGACCCGTTTCGGGAGGCGGGGCTTGGAGGAGAAGcgataatATTGCCTGGGAAACACAACAGTGTCTGCGCCGGCTGCTCCGCTCGGAGATAACAGCGTGTCATCAGAGCGCTGGCGTCATTTGGCTCCGGATGGGACCGTGCAACTCGATCCACCTTTAAATGGAGCGAGACAAAGACTCAGCGTTGGGTTTCCATCACATCAGCGTTTAGATGCCTTGGTGAGGGTGCAGGATCGAGTTTGACCAGCCTGTCCAGCCTGAAGAGCAACTACAGAGACGTATGCAAACATGAGTCCCAGCCGTCACCTGATCGTTACGGCCGTCTGATGAAGCAGGTGTTCAGCAGAAGTTTCATCCAGGAGCGAGTGATGGAGCGCAGGTGTGGCGAAGGAGCTTTGTTCTCCTCGTCATCATCAGGTTTCACTTAAAGCTGTGTTCAGTGAAAATGAAAAGGTGCCATCATTCATTCACCCCTCAGTTTGTTCCAGTCCTGGATGATCGCTGTCGTACAACACAAAAGGAGGCCGTCTGAAAAACGCTCGAGCTGCAGTAAACGAGCAATtgtataattaatcacatatataaacgtgtttgtttgcataatagctatgtgt
>XM_043255837.1
GAGATTTGAGCAGACGTTGGGTGCATGTGGAGTTTTGCTCTCTGCGGCGCTGTAAACGGTTTACTCATGCAGACGCCTCAGACGCTCGCTGCAGACAGAAGGCCGAGCTCAGCAGGAGCCTGGAGGATGAAAGCTGGTTTCCATGGAAACGACGGAATCCAATTAAAAGGGCCATTGGTACCAAAGCAGCCCGAAACACGGAACAAGGAAACCCCGAACTATTTATCATTCGGTTTCGAGCTGTCCTTCAGGTGCCGGAGAATAATCAGGGAGAGGAGTTCGAGCTCTCCGCCAGGACAGAGTGATGTTTATGATGATCAACAATCAGCAGAGGATGGACAAGCAGCCTTGAGGATCAAACACTGGAGAGGACACTTGAAAAACAGCCTTTCGAAAGTCGAGTTTGGAGGATGCTCACCGGTTTTGGGTGAAGACACTAATTGCTTTGACAGTGTTCACCAGGCCAACTCTGAACAGCGTCCTCTCGCATCCGTGCATCACCGAGGCATCGGTTCGGAGGAGAGCGCGAGGTCAGGAGCGCTGGCCGCCGCGgagttgccatggcaaccgctCCACAGCCAAAAAGCAGCTGCGGCGTTCTCTCCTTCTGAAAGGGCTTGTGCAGAGAAGAACGATTCGATTTCGAACCCGAACGATGGGCTTCGTACAAATCGACCCGTTTCGGGAGGCGGGGCTTGGAGGAGAAGcgataatATTGCCTGGGAAACACAACAGTGTCTGCGCCGGCTGCTCCGCTCGGAGATAACAGCGTGTCATCAGAGCGCTGGCGTCATTTGGCTCCGGATGGGACCGTGCAACTCGATCCACCTTTAAATGGAGCGAGACAAAGACTCAGCGTTGGGTTTCCATCACATCAGCGTTTAGATGCCTTGGTGAGGGTGCAGGATCGAGTTTGACCAGCCTGTCCAGCCTGAAGAGCAACTACAGAGACGTATGCAAACATGAGTCCCAGCCGTCACCTGATCGTTACGGCCGTCTGATGAAGCAGGTGTTCAGCAGAAGTTTCATCCAGGAGCGAGTGATGGAGCGCAGGTGTGGCGAAGGAGCTTTGTTCTCCTCGTCATCATCAGGTTTCACTTAAAGCTGTGTTCAGTGAAAATGAAAAGGTGCCATCATTCATTCACCCCTCAGTTTGTTCCAGTCCTGGATGATCGCTGTCGTACAACACAAAAGGAGGCCGTCTGAAAAACGCTCGAGCTGCAtgcAGCAAGCCAAAAACATGAGGCAGCTGTTCCCGCTCCATATACTCCATTCTCACTAAATTCAGTCAGAAAGCGCACGCTTTGTgttcaaaacaagaaaaagaaaacagcaattGTTTTTTCCCCCGCCGTCTCTATTGTTGCTGCGAGCGCGTTTCCATTATTCAGGGGAGCTTCTAAACACCTGCGCTTTGAAGTACGAGAAATAATGCATGCTAATTATATCCAAACAGAAGATTGGAAACGCGGGCGTTGAAACGGTTCGTCTAATTATGGAGCGCTTCCTGTGCACGTGCACGCTCACAGGACCGAGGAGAGTGAAGGTGACCGTCCTTCCCGTACACATCCCTCGCGCTCGTTTCTTCTGGCCCGTTTGGGTCATTCGTAAATGCATCATTTCGTTCGATGACGCGCTAAATGCATGCATTGGAGCGTTTTCCAGCACGGGGTTGCTGGGTCATCATTGCTAGGTGCTTCGTTATATACGGgttgtgaccctggagcacgaaACGAGTCGAAAATGGGTCAAAGTTGTCGATTTTATcttttgtgcaaaacaaaaaaaaatcgatgTTCCGCGAAGGCACTTAGCAGATCTCCTACCGTAAATAATAGTATGCTAAGAATTCGTTTGGACAGCGCTAGCGGCGATTTTCTCAGTCGTATGTCAGCCGAATACTGTCCTATCCGAACAAATCGTGCTTCATTTGAAAGGCTGTTTATTCGACGTACGATGCGACTTTTGTCAAGAAGCCTAGAAGCCGAAACGCTGAGCTCGCTCGTTCGcgttataatatttttaaaggcgCGCACTTTAAGGCTTCTGTTTTTTGTCGTTTCCCGCCTTTAAAGGTGGCGTAGTCCAAGCCGTTTAAAGCAAACATCGGCATTTGGGTTTTTATGAGAAGGCGTGATAGATGAAACAAAAGCCAACATGTAAAGCATTCACAATCCATTTTACCTGAatgcatttttggatgaatCAGGATTTAATTTTAACCTGTTGTATTTTCAGTTTGTCATTTCACCTGAATATTgccctttttatatatattttcagtgtatatacacacatacgcacatttatttatatatatataatatatatatatatatatatatatataatgtgt
>XM_043255838.1
GAGATTTGAGCAGACGTTGGGTGCATGTGGAGTTTTGCTCTCTGCGGCGCTGTAAACGGTTTACTCATGCAGACGCCTCAGACGCTCGCTGCAGACAGAAGGCCGAGCTCAGCAGGAGCCTGGAGGATGAAAGCTGGTTTCCATGGAAACGACGGAATCCAATTAAAAGGGCCATTGGTACCAAAGCAGCCCGAAACACGGAACAAGGAAACCCCGAACTATTTATCATTCGGTTTCGAGCTGTCCTTCAGGTGCCGGAGAATAATCAGGGAGAGGAGTTCGAGCTCTCCGCCAGGACAGAGTGATGTTTATGATGATCAACAATCAGCAGAGGATGGACAAGCAGCCTTGAGGATCAAACACTGGAGAGGACACTTGAAAAACAGCCTTTCGAAAGTCGAGTTTGGAGGATGCTCACCGGTTTTGGGTGAAGACACTAATTGCTTTGACAGTGTTCACCAGGCCAACTCTGAACAGCGTCCTCTCGCATCCGTGCATCACCGAGGCATCGGTTCGGAGGAGAGCGCGAGGTCAGGAGCGCTGGCCGCCGCGgagttgccatggcaaccgctCCACAGCCAAAAAGCAGCTGCGGCGTTCTCTCCTTCTGAAAGGGCTTGTGCAGAGAAGAACGATTCGATTTCGAACCCGAACGATGGGCTTCGTACAAATCGACCCGTTTCGGGAGGCGGGGCTTGGAGGAGAAGcgataatATTGCCTGGGAAACACAACAGTGTCTGCGCCGGCTGCTCCGCTCGGAGATAACAGCGTGTCATCAGAGCGCTGGCGTCATTTGGCTCCGGATGGGACCGTGCAACTCGATCCACCTTTAAATGGAGCGAGACAAAGACTCAGCGTTGGGTTTCCATCACATCAGCGTTTAGATGCCTTGGTGAGGGTGCAGGATCGAGTTTGACCAGCCTGTCCAGCCTGAAGAGCAACTACAGAGACGTGTTCAGCAGAAGTTTCATCCAGGAGCGAGTGATGGAGCGCAGGTGTGGCGAAGGAGCTTTGTTCTCCTCGTCATCATCAGGTTTCACTTAAAGCTGTGTTCAGTGAAAATGAAAAGGTGCCATCATTCATTCACCCCTCAGTTTGTTCCAGTCCTGGATGATCGCTGTCGTACAACACAAAAGGAGGCCGTCTGAAAAACGCTCGAGCTGCAGTAAACGAGCAATtgtataattaatcacatatataaacgtgtttgtttgcataatagctatgtgt
>XM_043255839.1
GAGATTTGAGCAGACGTTGGGTGCATGTGGAGTTTTGCTCTCTGCGGCGCTGTAAACGGTTTACTCATGCAGACGCCTCAGACGCTCGCTGCAGACAGAAGGCCGAGCTCAGCAGGAGCCTGGAGGATGAAAGCTGGTTTCCATGGAAACGACGGAATCCAATTAAAAGGGCCATTGGTACCAAAGCAGCCCGAAACACGGAACAAGGAAACCCCGAACTATTTATCATTCGGTTTCGAGCTGTCCTTCAGGTGCCGGAGAATAATCAGGGAGAGGAGTTCGAGCTCTCCGCCAGGACAGAGTGATGTTTATGATGATCAACAATCAGCAGAGGATGGACAAGCAGCCTTGAGGATCAAACACTGGAGAGGACACTTGAAAAACAGCCTTTCGAAAGTCGAGTTTGGAGGATGCTCACCGGTTTTGGGTGAAGACACTAATTGCTTTGACAGTGTTCACCAGGCCAACTCTGAACAGCGTCCTCTCGCATCCGTGCATCACCGAGGCATCGGTTCGGAGGAGAGCGCGAGGTCAGGAGCGCTGGCCGCCGCGgagttgccatggcaaccgctCCACAGCCAAAAAGCAGCTGCGGCGTTCTCTCCTTCTGAAAGGGCTTGTGCAGAGAAGAACGATTCGATTTCGAACCCGAACGATGGGCTTCGTACAAATCGACCCGTTTCGGGAGGCGGGGCTTGGAGGAGAAGcgataatATTGCCTGGGAAACACAACAGTGTCTGCGCCGGCTGCTCCGCTCGGAGATAACAGCGTGTCATCAGAGCGCTGGCGTCATTTGGCTCCGGATGGGACCGTGCAACTCGATCCACCTTTAAATGGAGCGAGACAAAGACTCAGCGTTGGGTTTCCATCACATCAGCGTTTAGATGCCTTGGGTGCAGGATCGAGTTTGACCAGCCTGTCCAGCCTGAAGAGCAACTACAGAGACGTATGCAAACATGAGTCCCAGCCGTCACCTGATCGTTACGGCCGTCTGATGAAGCAGGTGTTGATGGGAGGTTTGGGCGGCGCTCTGTGGGTGTGTCGCCCTCAGCtttccaagaaaaaaaagggcCGGGCGATTTCTGTGTGATCAGGGTGATGAAAGACCGAAAGGATGACTCAGTCCGGTTTCAATGCAGACGTTTACAATTTACAAAGAGCACTGCGTTAAAGAGGCAGCGTCAAATATTACGACCAATCTGAAGACTGTAAACTAACTCtaatcattaaaatagttcaaatactgtacattttataaaaccaGTTGCCTTGACAACTAACTGAAATGATCTGAATTTAAACTAAAagtctgaaatgaaaatgtactaatgctaaaaatagtaataattataaaaaaaaacc

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse
ko05032 Morphine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255833.1 False 1368 mRNA 0.50 7 20028487 20036473
XM_043255834.1 False 1288 mRNA 0.52 8 20027304 20036473
XM_043255837.1 True 2356 mRNA 0.48 9 20025669 20036473
XM_043255838.1 False 1231 mRNA 0.52 8 20027304 20036473
XM_043255839.1 False 1363 mRNA 0.50 7 20028487 20036473

Neighbor

gene id symbol gene type direction distance location
LOC122356781 NA coding downstream 408 19996649 ~ 20025261 (-)
map10 NA coding downstream 336736 19685919 ~ 19688933 (-)
ntpcr ntpcr,LOC107557727 coding downstream 340336 19680245 ~ 19685333 (-)
fbxo11a fbxo11a,LOC107725019,LOC107679165,LOC107733352,LOC107588452,LOC108413220,LOC108430631,LOC107667079 coding downstream 493666 19505862 ~ 19532003 (-)
kcnk12 LOC107679129,LOC107585442,LOC107688640,LOC108430255 coding downstream 565272 19429836 ~ 19460397 (-)
irf2bp2a irf2bp2a,LOC107690807,LOC107730382,LOC107557731,LOC107728327,LOC107564236 coding upstream 64586 20101059 ~ 20103872 (-)
tomm20a tomm20a,LOC107690811,LOC107728308,LOC107667141,LOC108247505 coding upstream 106076 20142549 ~ 20145468 (-)
LOC122357145 NA coding upstream 107123 20143596 ~ 20143727 (-)
arid4b arid4b,LOC107690809,LOC107557720,LOC107667027,LOC107728306 coding upstream 113985 20150458 ~ 20218900 (-)
b3galnt2 b3galnt2,LOC107730378,LOC107667096,LOC107728324 coding upstream 209014 20245487 ~ 20264253 (-)
G95190 NA non-coding downstream 179135 19846301 ~ 19846534 (-)
LOC122356282 NA non-coding downstream 190016 19818053 ~ 19835653 (-)
G95147 NA non-coding downstream 355338 19669709 ~ 19670331 (-)
G95110 NA non-coding downstream 432293 19591872 ~ 19593376 (-)
G95068 NA non-coding downstream 597743 19425563 ~ 19427926 (-)
G95469 NA non-coding upstream 38898 20075371 ~ 20075937 (-)
LOC122356209 NA non-coding upstream 71718 20108191 ~ 20140958 (-)
G95506 NA non-coding upstream 200205 20236678 ~ 20238227 (-)
G95519 NA non-coding upstream 478300 20514773 ~ 20515311 (-)
G95524 NA non-coding upstream 482127 20518600 ~ 20520093 (-)
LOC122357123 tsnax,LOC107557734,LOC107690806,LOC107564242,LOC107667162 other downstream 104000 19909195 ~ 19921669 (-)
disc1 LOC107666898,LOC107730373 other downstream 118607 19862530 ~ 19907062 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other downstream 663628 19286030 ~ 19362041 (-)
LOC122357020 LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639 other downstream 1050145 18957703 ~ 18975524 (-)
LOC122356088 ate1,LOC107679187,LOC107655512 other downstream 1352776 18545571 ~ 18672893 (-)
LOC122356211 gng4 other upstream 228253 20264726 ~ 20275386 (-)
G95520 NA other upstream 443452 20479925 ~ 20486704 (-)
G95510 nid1,nid1a,LOC107691203,LOC107750138,LOC107728305,LOC107689759 other upstream 452312 20488785 ~ 20492076 (-)
G95511 NA other upstream 457169 20493642 ~ 20496864 (-)
G95526 NA other upstream 533565 20570038 ~ 20571562 (-)

Expression


Co-expression Network