LOC122356781


Basic Information

Item Value
gene id LOC122356781
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 19996649 ~ 20025261 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255840.1
gctacagattaattcaaatttaaaaataaggtttttttttttgcaaaacatccctttatcttgcaatttttttcttctcactaAAAAACGAAAACATAATAGCGACTTCTCGTCTCTCGAATCGTATTTTTTTCACAGCAGTTGCAATTCGCCGTTTATTCTTTATTCTAACTTTTCCCTTTTTCAAGTCACTTTTGGTcagttttaatgcatccttccGGAATACAAAGTATGCATTTCTTCGAAAAGTCAAATCGAACGTAACGTTTAATCAACGTTCCACCATCGTTTCCTATCAACTGTGCGTCTCTTCAGCGGCTCTCTTAGATGTTCCGGCGCATGCGGCCCTGTTTAAAACCGTGTTTCTTCGACTCGGCAGCTGCTTCCAATCCGACGGCATTCGCTTCCCCGAGCCCCGTTTCCAAATGTTGAACGAGGGCGGGCAGGTTCACGCAGACCTCTCTGTTCAAAGCCGCCCTGTTCTCCGTCAAACACTGCGTGGCAGCATCAAACGCGCTGGCCGCTCagatatgtttgtgtttttccagcAGCTTTGCGGGAGGATAATTGGGGGCAGGCTTCTGCAAAGCTGCCGGATGTGTGGAGCATTTCTCTTCCCGGCTGTTTCTGGGCGGGGTCGAGTGTAAAAGGCTCCTCCTCTCCGTCGCTGGAGGCCCTGAGTCATTCGGGGCCCCGGTAATAAACATCGCACCCACGCGTGATATCTGGCCCCTGCTTGTTGAATTTTGCGTGTTGTGATGTTGGTCGGACTCGTCTCGCTCGGGCCGGTGCCAGTGCTTTTGTTTTCCCCGAGCCGAGGAGGGTCAGCGGCTGGTCAGGTCCAAATGAAAAAATAGCTGGCAGGAGCTCAAATCCTCAAAGCCTTTGACTGTTTCTCCCGCAACGAGAGCCAGATCTGTAGAGCGGCTGCTGAAGTCTGGATTGATGGTAACTGGATTAATCTGCTCAGATGTCTCGTTTGGCTCCACCCGGGCGGCTTTCCGAAAAGACGTGATTTTGGAGATCCTTTAGGACGCGTTATAGCTACATGTTTACCATCAGAAGCATGAAGCAACGGCTGTTTAAGAGTAGATTTGTGCATCATTATGGCGTCCAGCAACATGCTTCCTGTTTCCGAACCCGAGTCAAATGCTTGAGATGCTTCAGGTTCCAGTACGTTGAGACTGATGTACACTCGCCCGTCACATTGTCCACATTTTTAGAGTAAGTCACACCCCTGCTTCCTCGAACATGGCATATAAAAAGCGGTACGGTATAAACTGGGCCCAGTGCGGAGAAAATGGCAAAAGCCAGAATTTCGGTGGCTGAGGACCAGTTCGTCTGCTCGGTTTGTCTGGATCTCCTCGTGGATCCGGTGACCATTCCCTGTGGACACAGTTACTGCATGAACTGTATTGCAAGCCACTGGAACGAGCAGGATCGGACGGGGAGCTACAGCTGTCCTCAGTGCCGAGGGGCCTTCACGCCGAGACCCGCTTTAGGCAAGAACGTGATGATCGCCGAAATGGTGGAGAAACTGAAGAAGAGCGAGCTTCGGGATGCCGGAGGCGGTGATGTGAAGTGCGACATCTGCACCGGGCGGAAAGACAAGGCGGTCAAGTTCTGTCTGGTGTGTCTGAACTCTTACTGTGCCGCTCATTTTGGGCGTCATGAGGAGCTCCACTCGGGAAAGCGACACAAAGCGATCGATGCCAGCGGACGACTGAAGCAGATGACCTGCCCTAAACACGATAAGACTCTGGAGGTTTTCTGTCGCACCGACAAGAAATGTATCTGCATTCTTTGTGTGATGGACGAACACAGGAACCACGAGACCGTATCAGCCGCGGAAGAGAGGACTAAGGTGCAGGGTCATTTGAGGGCGATGCAGAGAACGATCCAGCAGAGAATCCAGAAGAAAGAGATGCAGCGTCAGGAACTGAGAGACGCTGTGGAGTCTCAGAAGAGATCCGCACAGGCAGCGGTGGAGGACAGTGAGAAGATCTTCTCTGATCTCGTTCGCTCGATTGAGAGAAGCCGCTCTGAGGTGACGCAGCTGATCAGAGCTCAGGAGCGAGCTTCAGTGAGTCGAGCCCAAGAACGACTGGAGCAACTGAAGCAGGAGATCGCGGAGCTGAGGAGGAACAAGGCCGAAGTGGAGCAGCTTACAGACACGGACAACCACGTGCATTTGCTCCAGAATTTCCAGTCCCTCGCCTCTCTCTCCTTATCCTCAAAATTACCCAGAATCATCATCGGTTCCGTCCTCTCTTTCGATGAAGTTGTGAAATCTGTCTCTAAAATCAGAGACCAACTAAATCAATACTGCAGAGGGGTGATCAACAACATATCCGGCGCAGGTAAATGACCAAGCATTCATCTATTCATTCGTGAAACACATTCAGATCGTCCTCGCCCCGATTTTGAGACCAGAGACGAATACCTGGGATatttccaTCAATTCACTTTGGATCCGAAcacaactaataaaaacatcgGTCTCTCTGATAAGAGCAGGACGATTACCGGCACGCTTGCGGACCAgccgtatcctgatcatccagacagatttgattcTGTAGttcaggtgttgtgtagagagagagtgtCTGGACGCTGTTATTGGGAGCTTGACTGCAATCAGGTTGAACGTTTGGGCGTATCGGTGTCTTATAAGAGCATCGGTAGGAAGGGACATGGCAACGAGTGTAAGTTTGGACGTAATAACCAGTCCTGGATATTGTTGTGTTCACCACCCAAATACACATTCCTGCACAATAACACGAAGACTAAACTCACCGTAGCATCCAGCTCCTCTAGaataggagtgtatgtggatcaCGGCGCGGGGattctgtccttctacagcgtctctgacacaatgaCCCTCATTCATAAAGTCTACACCACATTCACACAACCTCTCTATCCTGGTTTCTCGCTGGGAAGCAACGCAACGGTGAAGCTATGTAACgtccaaaaataaatgatacagaTATCTTTAGGGTCTGTTTTAAAGACAAAGGTAAATATTACAGCTTAGCTATTATTGCTGATTGTAGCTTGAATCCAaaacaataattcaataatCGTTTTGTTTCATATTACACTTTTCTGTTGATATTTCATGTggtgaaataaaaacttgtttatttttgcccCATGT

Function

GO: NA

KEGG:

id description
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255840.1 True 3166 mRNA 0.49 8 19996649 20025261

Neighbor

gene id symbol gene type direction distance location
map10 NA coding downstream 307716 19685919 ~ 19688933 (-)
ntpcr ntpcr,LOC107557727 coding downstream 311316 19680245 ~ 19685333 (-)
fbxo11a fbxo11a,LOC107725019,LOC107679165,LOC107733352,LOC107588452,LOC108413220,LOC108430631,LOC107667079 coding downstream 464646 19505862 ~ 19532003 (-)
kcnk12 LOC107679129,LOC107585442,LOC107688640,LOC108430255 coding downstream 536252 19429836 ~ 19460397 (-)
golga4 golga4,LOC107724992,LOC107688375,LOC107733336,LOC107679131 coding downstream 596759 19363572 ~ 19399890 (-)
LOC122356780 NA coding upstream 408 20025669 ~ 20036473 (-)
irf2bp2a irf2bp2a,LOC107690807,LOC107730382,LOC107557731,LOC107728327,LOC107564236 coding upstream 75798 20101059 ~ 20103872 (-)
tomm20a tomm20a,LOC107690811,LOC107728308,LOC107667141,LOC108247505 coding upstream 117288 20142549 ~ 20145468 (-)
LOC122357145 NA coding upstream 118335 20143596 ~ 20143727 (-)
arid4b arid4b,LOC107690809,LOC107557720,LOC107667027,LOC107728306 coding upstream 125197 20150458 ~ 20218900 (-)
G95190 NA non-coding downstream 150115 19846301 ~ 19846534 (-)
LOC122356282 NA non-coding downstream 160996 19818053 ~ 19835653 (-)
G95147 NA non-coding downstream 326318 19669709 ~ 19670331 (-)
G95110 NA non-coding downstream 403273 19591872 ~ 19593376 (-)
G95068 NA non-coding downstream 568723 19425563 ~ 19427926 (-)
G95469 NA non-coding upstream 50110 20075371 ~ 20075937 (-)
LOC122356209 NA non-coding upstream 82930 20108191 ~ 20140958 (-)
G95506 NA non-coding upstream 211417 20236678 ~ 20238227 (-)
G95519 NA non-coding upstream 489512 20514773 ~ 20515311 (-)
G95524 NA non-coding upstream 493339 20518600 ~ 20520093 (-)
LOC122357123 tsnax,LOC107557734,LOC107690806,LOC107564242,LOC107667162 other downstream 74980 19909195 ~ 19921669 (-)
disc1 LOC107666898,LOC107730373 other downstream 89587 19862530 ~ 19907062 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other downstream 634608 19286030 ~ 19362041 (-)
LOC122357020 LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639 other downstream 1021125 18957703 ~ 18975524 (-)
LOC122356088 ate1,LOC107679187,LOC107655512 other downstream 1323756 18545571 ~ 18672893 (-)
LOC122356211 gng4 other upstream 239465 20264726 ~ 20275386 (-)
G95520 NA other upstream 454664 20479925 ~ 20486704 (-)
G95510 nid1,nid1a,LOC107691203,LOC107750138,LOC107728305,LOC107689759 other upstream 463524 20488785 ~ 20492076 (-)
G95511 NA other upstream 468381 20493642 ~ 20496864 (-)
G95526 NA other upstream 544777 20570038 ~ 20571562 (-)

Expression


Co-expression Network