btbd6a (btbd6a,LOC107724364,LOC107588564,LOC107705400,LOC107655006,LOC107585501)


Basic Information

Item Value
gene id btbd6a
gene name btbd6a,LOC107724364,LOC107588564,LOC107705400,LOC107655006,LOC107585501
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12457871 ~ 12461979 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255845.1
GCAACACAGAATTTACAGGAGGGATAGAGCTCTGGGAGAGACAACCCTCTATCGTGACGTCAGCCGAGGGAGAgagagctcaaaataaactCAAACTTCATCATCATTCCGTGTGGCCACAGCGGAGGAAAGATCTGCTTGGCCGCTATAAGACTACAGACCCTATTTTGTCTATATTTGCTGTGTGGTTTTGGAGAGATTGCTTTTGAAGTTTGCAGTACGGGACTGGAGAGGATGCGAGAAAAAAGAGATACAAATATTCGCTGAAATCCGAAAATGTATGTGACCGTTTAGCGGAGCAGTTTTTGTACTCACACGGAAACCACGCAACATTATTTAGGAATACCACGGACCACGGTTGTAGcagataattattttttatacgCATATTTTGGCAAACTTTTTTGTTCTGATGCCCGCTGAGTCGGAGTGCAAGTTGTCCCATCATGGCCGGATCATGAAATGCGTTACTTTTTTACTCTTGCTCCCTGAAACGTTAAAGAAGTTGAAGCGGGCAAGCAAGCACCCCGGCAGGCTGTCATTGTGCTATAACATCTTAACTCTTTCCCTGAAGAAAAGGATGGCGGCGGAACTGTACCCCGTGAACGATCACGCCACAGTGCAGAAGAATGGGACCGTGATGCTGAGTCTGCCGGAGAAGAAGAGGAGCGTGGAGCCGGTTGCGCAGTCCACCGCGTCCATCGCCACCACACCGACCACAGAgcaaaacatcaacaacaacaacgtggAGATTCCCAGCTGGCACTCCGCGCACCCGACTTTACGCGAAAGAAACGCGCTCATGTTCAATAATGAACACATGGCAGATGTTCATTTCATTGTTGGTCCGCCTGGGGAATCAGAAAGGGTCCCGGCACACAAGTATGTGCTGGCAGTGGGAAGCTCTGTTTTCTGTGCCATGTTTTACGGGGATCTCGCAGAAGGAGACTCTGATATCCATATTCCAGATGTGGAACCCGCTGCTTTTCTCATCCTGCTCAAATACATGTACAGTGATGAGATAGAGCTGGCGGCCGACACAGTATTGGCTACGCTTTACGCTGCCAAAAAATACCTGGTGTCTGCTCTGGCTCGCGCATGTGTGGGTTTCCTCGAGACGAGCCTGGAGGCGAGAAACGCGTGTGTTCTGCTATCTCAAAGTCGGCTGTTTGAGGAGCCGGAGCTCACTCAGAGGTGTTGGGAAGTGATTGACGCCCAGGCAGAGCTAGCGCTGCGCTCGGAAGGATTTACAGAGATTGACTTGCCCACACTAGAACACATTTTACAAAGGGAAACTCTGAACGTGAAGGAGGCGGTGGTTTTCCAGGCCATCCTGGGATGGGCCGACGCAGAGTGTCGGAGACAAGGCCTGAGCCCCACTTCACAGAACCAGCGCTCCATGCTGGGGAAGGCTCTGCACCTTGTGCGTCTGCCTTCAATGACACTGCAGGAATTTGCAGATGGAGCTGCGCAGTCGGACATTTTAACCCTTGAGGAAACGCACAGCATCTTTCTCTGGTACACGGCTGCTACGAAACCTGCACTGGGATTCCCAGTTGTGCCCAGGAAGGGGCTGACGCCACAGCGCTGCCACCGTTTCCAATCCTCGGCGTACCGAAGCAACCAGTGGCGCTATCGCGGGCGCTGCGACAGTATCCAGTTCGCTGTGGATAAGCGTGTGTTTATCGCCGGACTTGGTCTGTACGGCTCCAGTGGAGGGAAGGCGGAATACAGCGTCAGAATTGAACTAAAGAGACAGGGAGTGCTTCTTGCACAAAACCTGACCAAATTTGTGTCAGATGGTTCTAGCTCTACGTTCCCCGTGTGGTTCGAGCACCCGGTACAAGTGGAGCAGGACACGTTCTACACTGTTAGCGCCGTTCTAGATGGGAGCGAGCTGAGTTATTTTGGACAGGAAGGAATGACAGAAGTCCAGTGTGGGAAAGTCACCTTTCAGTTTCAGTGTTCCTCTGACAGCACCAATGGGACAGGGGTGCAGGGGGGACAGATTCCGGAGCTGATATTTTATGCATGAAAACTTGGACTGATTCATTAAAGAAGAGACAGCGGggggattttttttcctctcaaataaatgcctttactcACAATAGCTGCAAGACACTACTACAAGAGGAGACTATCCCCtctaattcagtttttttttacgtttcacACATAAATGGAATGCTTCCcaaacttatttatttctttaaacatactgttttaaaacatgtactttaatttaagcacattttatttctaattattcattatatgcCTGTGTACAGTCAGTAAAACATGGGAAGTTTGCACTTGAAACTAGGCAGCTTTTCCTCTGTCTTGTTATTTAATGGTTATTTGTTGACAGCTTGATGCTGAGTGACCTAAAAAGGGTTTCAAGAGCCtgcaaaatcataaaatatgtttCTATTCAAACTaca
>XM_043255846.1
GGAAACACTGATCTAATCCCCGCTACATATGTTCACTGTAAACCGCTTAGATCCGTCTGTGCTGTCTGTGAGAAAAAGAGGAGTCCGGGGAGAGAGGGAAGCATTACGCTGCGTGAGGACTTTACTGGTAAAGCGGAGAGCAGTCGTGCGCGCTCCAGTATTTCCACAAGTCCAGCCCTGGTCCGGTTTCAGACTCCATCTCGACCGACCGCGAACCGgagaaataaaacttttgacATCGCTTTGAATCAAGCGCAGAGTCTCTGTGTGATGACAACGAACTGACGCACAAAAACCCTGAATTTAAGAAAAGGATGGCGGCGGAACTGTACCCCGTGAACGATCACGCCACAGTGCAGAAGAATGGGACCGTGATGCTGAGTCTGCCGGAGAAGAAGAGGAGCGTGGAGCCGGTTGCGCAGTCCACCGCGTCCATCGCCACCACACCGACCACAGAgcaaaacatcaacaacaacaacgtggAGATTCCCAGCTGGCACTCCGCGCACCCGACTTTACGCGAAAGAAACGCGCTCATGTTCAATAATGAACACATGGCAGATGTTCATTTCATTGTTGGTCCGCCTGGGGAATCAGAAAGGGTCCCGGCACACAAGTATGTGCTGGCAGTGGGAAGCTCTGTTTTCTGTGCCATGTTTTACGGGGATCTCGCAGAAGGAGACTCTGATATCCATATTCCAGATGTGGAACCCGCTGCTTTTCTCATCCTGCTCAAATACATGTACAGTGATGAGATAGAGCTGGCGGCCGACACAGTATTGGCTACGCTTTACGCTGCCAAAAAATACCTGGTGTCTGCTCTGGCTCGCGCATGTGTGGGTTTCCTCGAGACGAGCCTGGAGGCGAGAAACGCGTGTGTTCTGCTATCTCAAAGTCGGCTGTTTGAGGAGCCGGAGCTCACTCAGAGGTGTTGGGAAGTGATTGACGCCCAGGCAGAGCTAGCGCTGCGCTCGGAAGGATTTACAGAGATTGACTTGCCCACACTAGAACACATTTTACAAAGGGAAACTCTGAACGTGAAGGAGGCGGTGGTTTTCCAGGCCATCCTGGGATGGGCCGACGCAGAGTGTCGGAGACAAGGCCTGAGCCCCACTTCACAGAACCAGCGCTCCATGCTGGGGAAGGCTCTGCACCTTGTGCGTCTGCCTTCAATGACACTGCAGGAATTTGCAGATGGAGCTGCGCAGTCGGACATTTTAACCCTTGAGGAAACGCACAGCATCTTTCTCTGGTACACGGCTGCTACGAAACCTGCACTGGGATTCCCAGTTGTGCCCAGGAAGGGGCTGACGCCACAGCGCTGCCACCGTTTCCAATCCTCGGCGTACCGAAGCAACCAGTGGCGCTATCGCGGGCGCTGCGACAGTATCCAGTTCGCTGTGGATAAGCGTGTGTTTATCGCCGGACTTGGTCTGTACGGCTCCAGTGGAGGGAAGGCGGAATACAGCGTCAGAATTGAACTAAAGAGACAGGGAGTGCTTCTTGCACAAAACCTGACCAAATTTGTGTCAGATGGTTCTAGCTCTACGTTCCCCGTGTGGTTCGAGCACCCGGTACAAGTGGAGCAGGACACGTTCTACACTGTTAGCGCCGTTCTAGATGGGAGCGAGCTGAGTTATTTTGGACAGGAAGGAATGACAGAAGTCCAGTGTGGGAAAGTCACCTTTCAGTTTCAGTGTTCCTCTGACAGCACCAATGGGACAGGGGTGCAGGGGGGACAGATTCCGGAGCTGATATTTTATGCATGAAAACTTGGACTGATTCATTAAAGAAGAGACAGCGGggggattttttttcctctcaaataaatgcctttactcACAATAGCTGCAAGACACTACTACAAGAGGAGACTATCCCCtctaattcagtttttttttacgtttcacACATAAATGGAATGCTTCCcaaacttatttatttctttaaacatactgttttaaaacatgtactttaatttaagcacattttatttctaattattcattatatgcCTGTGTACAGTCAGTAAAACATGGGAAGTTTGCACTTGAAACTAGGCAGCTTTTCCTCTGTCTTGTTATTTAATGGTTATTTGTTGACAGCTTGATGCTGAGTGACCTAAAAAGGGTTTCAAGAGCCtgcaaaatcataaaatatgtttCTATTCAAACTaca

Function

symbol description
btbd6a Acts upstream of or within regulation of neurogenesis. Predicted to be located in cytoplasm and nucleus. Predicted to be active in cytosol. Is expressed in nervous system; neuroblasts; posterior neural keel; posterior neural plate; and spinal cord neural tube. Orthologous to human BTBD6 (BTB domain containing 6).

NR:

description
PREDICTED: BTB/POZ domain-containing protein 6-B-like

GO:

id name namespace
GO:0050767 regulation of neurogenesis biological_process
GO:0000932 P-body cellular_component

KEGG:

id description
K10478 BTBD3_6; BTB/POZ domain-containing protein 3/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255845.1 True 2444 mRNA 0.48 4 12457871 12461000
XM_043255846.1 False 2178 mRNA 0.50 5 12457871 12461979

Neighbor

gene id symbol gene type direction distance location
LOC122356084 LOC107705397,LOC107654925,LOC107588565,LOC107675586 coding downstream 12993 12441039 ~ 12444878 (-)
nusap1 nusap1,LOC107585493,LOC107724270 coding downstream 58343 12395781 ~ 12399528 (-)
rtf1 rtf1,LOC107655008,LOC107588567 coding downstream 66122 12379697 ~ 12391749 (-)
golga5 golga5,LOC107588574,LOC107705390,LOC107585491 coding downstream 78654 12373606 ~ 12379217 (-)
trip11 trip11,LOC107655016,LOC107588575,LOC107585490,LOC107675555 coding downstream 84880 12354697 ~ 12372991 (-)
rrbp1a rrbp1,LOC107705351,LOC107654983,LOC107585504,LOC107675545 coding upstream 98179 12560158 ~ 12575184 (-)
snx5 snx5,LOC107654994,LOC107705401,LOC107724504 coding upstream 118169 12580148 ~ 12586465 (-)
si:dkey-76k16.6 LOC107654998,LOC107585507,LOC107724435,LOC107675547,LOC107577850,LOC107600570 coding upstream 126965 12588944 ~ 12591353 (-)
si:dkey-76k16.5 LOC107675535,LOC107724429,LOC107585509,LOC107600570 coding upstream 129974 12591953 ~ 12594130 (-)
LOC122356399 LOC107675571,LOC107654995,LOC107585506,LOC107724409,LOC107600571 coding upstream 148193 12610172 ~ 12612682 (-)
LOC122356854 NA non-coding downstream 50938 12401671 ~ 12406933 (-)
LOC122357111 NA non-coding downstream 210931 12121940 ~ 12246940 (-)
G93315 NA non-coding downstream 290973 12114926 ~ 12166898 (-)
G93148 NA non-coding downstream 415942 12041695 ~ 12041929 (-)
G93144 NA non-coding downstream 421053 12036612 ~ 12036818 (-)
G93392 jag2a,LOC107654986,LOC107705348,LOC107724379,LOC107675567,LOC107600569,LOC107585503 non-coding upstream 70002 12531981 ~ 12533886 (-)
G93394 NA non-coding upstream 72007 12533986 ~ 12535068 (-)
G93460 NA non-coding upstream 643100 13105079 ~ 13105684 (-)
G93470 NA non-coding upstream 694951 13156930 ~ 13158437 (-)
G93471 NA non-coding upstream 700166 13162145 ~ 13162370 (-)
tmem234 tmem234,LOC107675523,LOC107576456 other downstream 27093 12429197 ~ 12430778 (-)
vti1b vti1b,LOC107655020,LOC107705385,LOC107724223,LOC107675543 other downstream 164277 12278454 ~ 12293594 (-)
utp25 diexf,LOC107668835,LOC107707040,LOC107675582,LOC107757128 other downstream 658839 11771428 ~ 11799032 (-)
six1a six1a,six1,LOC107588725,LOC107675533,LOC107708210,LOC107668775,LOC108434988 other downstream 809836 11643930 ~ 11648035 (-)
zdhhc16a zdhhc16,zdhhc16a,LOC107708229,LOC107668773,LOC107673955,LOC107548628 other downstream 925414 11525403 ~ 11532457 (-)
LOC122356414 NA other upstream 95098 12557077 ~ 12597302 (-)
LOC122356823 LOC107654911,LOC107705409,LOC107600568,LOC107683712 other upstream 847973 13309952 ~ 13325051 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other upstream 1058434 13520413 ~ 13558834 (-)
srd5a2b srd5a2b,LOC107739895,LOC107654923,LOC107683892,LOC107705374,LOC107602938 other upstream 1102443 13564422 ~ 13568025 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other upstream 1231047 13693026 ~ 13718314 (-)

Expression


Co-expression Network