LOC122356787 (LOC107739478,LOC107564218)


Basic Information

Item Value
gene id LOC122356787
gene name LOC107739478,LOC107564218
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3229113 ~ 3231423 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255847.1
TTCATACACTGCACAAATGGCCAATCCATATTGTGTACCTCCTCTACTTCCCATGCCACATTCATATGGTCCTCCACCTATTCCCAGTCCTCTCCACCTCTCCACCATGACCTCGGCCTACTCTACCCCAGCGGCTAGTCAAATTTCAACTGAATCTATACAAACAAAGCCTGTAAGATGCcttaaaacaatagaaacagTCAAAATGGTTCCGAAAGGTAAAGCGGGGCCTGTCAGCGCACTTGTTTCCATACAACCTATAGAGGAcagtaatgaaaaacaaacatcgGAGGAAGCCAAGAACATACAGTTTGCTACCATAAAAGATGATGACATCAAGGCTAAGCAGAAGAAACGGCTTGAACAGTTTAACCAGAGAATGAAGCTGAAGAAAGAGCAACAAATGGAAGCCCAGCGTTCACGTGGACAAAATCGGAATTCAGCTCAAGGTAAAAGTACCCCCAATGAGATAAAGAATGTGTGGATATGTGGCCACTCTCTTGTGTTTTGGGCTGAGAAGAGGGCTACTTCCCCTGAGTATGGAGTGCAGCTGGGCATGCACCCAGATTCAATACGCATCTGGTGGAAGGGCGTGCAGGGCATGGCGTGGCAACAGCTTGTTCCTTTGCTGCTCCAGCTCAAAGACAACTGGCCCAAGCCTGATGTGCTTATATTCCACTTGGGTGGAAATGACATAAGCACAACTGATCCAGAGGACTTTATTGAGACTGTGAAGAAAGACCTGACCTCGCTGAAGAGCATATTCCCCGGATGCCTGCTGGTGTGGTCCAGCATCCTTTCACGGCAGACCTGGAGGGGTACAGAAGACAGCAAAGAGATGGACGTTATCCGGATGGCCATTAATGAGAGCATATGTGGAATTATGAGACAACTTTGTGGCTCTGCTTTGAGCCACGAAAACATAAGGCCAAGTTTTGGACTCTACAGACCAGATGGGGTTCATCTATCGGGGAAGGGTATTGATACCTTCAATCTGAACCTGCAGGCTTTTCTGGAGAAATGGGAGAATGAGACTAACAAGACGGAGCCATCGGGTTTGAGACGAGGGaaagtcatttgttttgtttag

Function

NR:

description
PREDICTED: uncharacterized protein LOC107739478, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255847.1 True 1090 mRNA 0.47 3 3229113 3231423

Neighbor

gene id symbol gene type direction distance location
LOC122356783 LOC107655626,LOC107728064,LOC107564218,LOC107739478,LOC107706823 coding upstream 1364 3209792 ~ 3227749 (+)
LOC122356067 ppp2r5d,LOC107559765,LOC107696374,LOC106605890 coding upstream 178446 3022616 ~ 3050667 (+)
LOC122356304 LOC107739478,LOC107564218,LOC107728064,LOC107655626,LOC107559768 coding upstream 249864 2971146 ~ 2979249 (+)
LOC122356776 LOC107564218,LOC107739478,LOC107706823 coding upstream 257966 2957658 ~ 2971147 (+)
LOC122357122 cul9,LOC107655624,LOC107669557 coding upstream 277351 2916892 ~ 2951762 (+)
znf318 znf318,LOC107739464,LOC107564219,LOC107728066 coding downstream 3620 3235043 ~ 3246109 (+)
tjap1 tjap1,LOC107728071,LOC107559778 coding downstream 89006 3320429 ~ 3398358 (+)
ncoa4 LOC107739471,LOC107669570,LOC107696383,LOC107728073 coding downstream 186111 3417534 ~ 3426736 (+)
LOC122356604 LOC107739472,LOC107565599,LOC107669574 coding downstream 203100 3434523 ~ 3440314 (+)
LOC122356793 LOC107669554,LOC107696371,LOC107578696 coding downstream 482410 3713833 ~ 3717294 (+)
G90319 tuba4l,LOC107655627,LOC107559781,LOC107564211,LOC107706828,LOC107669576 non-coding upstream 25094 2857325 ~ 3204019 (+)
G90326 cul9,LOC107736443,LOC107564217,LOC107669557,LOC107683065 non-coding upstream 27626 3199847 ~ 3201487 (+)
LOC122356074 NA non-coding upstream 208222 3020068 ~ 3020891 (+)
G90339 NA non-coding upstream 211893 3016794 ~ 3017220 (+)
LOC122356240 NA non-coding upstream 347427 2865807 ~ 2881686 (+)
LOC122356226 NA non-coding downstream 14840 3246263 ~ 3247132 (+)
G90365 NA non-coding downstream 84240 3315663 ~ 3315908 (+)
G90373 lrrc73,LOC107696385,LOC107728077,LOC107739469 non-coding downstream 170541 3401964 ~ 3403754 (+)
G90378 NA non-coding downstream 218750 3450173 ~ 3450485 (+)
G90381 NA non-coding downstream 238024 3469447 ~ 3489791 (+)
LOC122356782 NA other upstream 19360 3207411 ~ 3209753 (+)
G90324 cul9,LOC107564217,LOC107669557,LOC107559769,LOC107655624,LOC107706827 other upstream 37000 3187826 ~ 3192113 (+)
G90349 NA other upstream 49180 3179427 ~ 3179933 (+)
LOC122356072 znf318,LOC107739464,LOC107564219,LOC107728066 other upstream 218472 2982559 ~ 3010641 (+)
G90230 NA other upstream 758732 2469945 ~ 2470381 (+)
G90343 ppp2r5d,LOC107696374,LOC107559765 other downstream 39902 3271325 ~ 3274372 (+)
G90348 dnph1 other downstream 46414 3277837 ~ 3280997 (+)
G90377 NA other downstream 217978 3449401 ~ 3450017 (+)
prkn park2,LOC107739476,LOC107669573,LOC107696378 other downstream 388983 3620406 ~ 3713763 (+)
pkdcca pkdcca,LOC107669579,LOC107739483,LOC107718010,LOC107695038,LOC107590011,LOC107586469 other downstream 577630 3809053 ~ 3832550 (+)

Expression


Co-expression Network