qkib (qki,LOC107696379,LOC107559772)


Basic Information

Item Value
gene id qkib
gene name qki,LOC107696379,LOC107559772
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3482958 ~ 3543676 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255850.1
ACTCAGTGTGATCATGTGACGGGCTCGAGAGCGCAAGAGGAGCTGGTCGGTAACGGAGGACCGAATGCCAATCTCATTGAGAAAGCGCCTTTATTGCGCGTAAGAGACGGGAGGGACAGACGTTTCTAGTgctgcacacatacacagacaggCAAGACACAGGAAGCTCTGGGGAACTCGGGAAAAGGGTGCATTTTCGCCGCCTCAAGAGGAAGTTAAGGACAAATCTCTCgctaaaataaatcttaaaaggGGCACTGGGCACGCGGGAGTCGCCTTTGCCGGTAACTTGTGGGATTTATCGGGAATTGTTTCTGAAAGGAGATCTGGCTTCCCCCTCCGCAcgtttatatttcatttgattcatttaatttcatttcatctgCTGCCCTAAACAACTGTCATCTCCCGACTTGCCGTAGCCTATTGCAGCAGCGGATTGTGCGTAAAGACAGAGACAGCGAGCCTTTTCCGCGGACGAGCCGGGCACTTGCCTTCTTCACACGCGTTTTTTTGTactctatttattatttatacccaagcctttatttattttgggacTTTTTCCGTCTATTTTGGGGCGTCGGTGGTGATTCCTGTGGAATATGGTGGGGGAAATGGAAACGAAAGAGAAGCCGAAGCCGACCCCAGATTATCTGATGCAGCTCATGAACGATAAGAAACTGATGAGCAGTCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAACGGCTTCTCGACGAAGAGATCAGCAGGGTACGAAAGGACATGTACAACGACACGTTAAACGGCAGCACGGAGAAGAGAAGCTCCGAGCTCCCGGACGCCGTCGGCCCCATCGTTCAGCTCCAAGAGAAACTCTATGTGCCTGTTAAAGAATATCCTGACTTTAATTTTGTGGGCCGGATCTTGGGCCCGCGGGGGCTCACAGCCAAACAGCTGGAGGCAGAGACAGGATGTAAGATCATGGTGAGAGGGAAAGGCTCCATGAGGGACAAGAAGAAGGAGGAACAAAACCGAGGCAAACCCAACTGGGAGCACCTGAATGAGGACCTCCATGTGCTCATTACCGTGGAGGATGCCCAGAACCGGGCTGAGATCAAGCTTAAACGTGCAGTAGAGGAGGTTAACAAGCTACTCGTGCCTGCGATGACTAACTCCCAGATGGCCCACAGAGAGGCCGCCCCCTTCCTTATCAATCCCAACCCCGCTGCTGCTGTGTATGATGTCCAGCAGTACCCTCCCACATCCCAAGGGAGGCAGGAGAATGAAGGGCCCAGTGGTTTGTGGGAGGTTCCATCTGTTCCCTTCATGGCACAATAG

Function

symbol description
qki Enables RNA binding activity. Predicted to be involved in regulation of mRNA splicing, via spliceosome. Predicted to act upstream of or within several processes, including long-chain fatty acid biosynthetic process; positive regulation of macromolecule metabolic process; and vasculogenesis. Predicted to be part of cytoplasm. Predicted to be active in nucleus and synapse.

NR:

description
PREDICTED: protein quaking isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255850.1 True 1325 mRNA 0.52 6 3482958 3543676

Neighbor

gene id symbol gene type direction distance location
LOC122356548 qki,LOC107739475,LOC107559772,LOC107696379,LOC107669572 coding downstream 15901 3454742 ~ 3467057 (-)
yipf3 yipf3,LOC107696384 coding downstream 66026 3412331 ~ 3416932 (-)
lrrc73 lrrc73,LOC107728077,LOC107696385 coding downstream 73313 3401937 ~ 3409645 (-)
mea1 mea1,LOC107739467,LOC107696388,LOC107728068,LOC107564221 coding downstream 204577 3276168 ~ 3278381 (-)
LOC122356068 dlk2,LOC107696386,LOC107669558,LOC107559779,LOC107728069 coding downstream 410564 3056748 ~ 3072394 (-)
prph2b LOC107739477,LOC107586467,LOC107578331,LOC107590000,LOC107669578,LOC107728796,LOC107696376 coding upstream 218157 3761833 ~ 3764601 (-)
LOC122356122 kcng3,LOC107758134,LOC107590001,LOC107756869,LOC107586474,LOC108273984 coding upstream 472357 4016033 ~ 4022400 (-)
haao haao,LOC107586504,LOC107699283,LOC107727361,LOC107590002,LOC107678607,LOC107707146 coding upstream 518796 4062472 ~ 4067606 (-)
LOC122357001 LOC107699293,LOC107586477,LOC107727368,LOC107678540,LOC107707148 coding upstream 697851 4241527 ~ 4244433 (-)
thada thada,LOC107586496,LOC107590015,LOC107707143,LOC107727367,LOC107590014 coding upstream 702055 4245731 ~ 4325475 (-)
G90505 NA non-coding downstream 31545 3450994 ~ 3451413 (-)
G90504 NA non-coding downstream 32225 3450424 ~ 3450733 (-)
G90482 NA non-coding downstream 81892 3370165 ~ 3401066 (-)
G90459 NA non-coding downstream 289656 3191991 ~ 3193302 (-)
G90454 NA non-coding downstream 304398 3176618 ~ 3178560 (-)
LOC122356977 NA non-coding upstream 24940 3568616 ~ 3578736 (-)
G90533 NA non-coding upstream 167720 3711396 ~ 3712539 (-)
G90535 NA non-coding upstream 170248 3713924 ~ 3714846 (-)
G90622 NA non-coding upstream 385603 3929279 ~ 3930527 (-)
G90623 NA non-coding upstream 387140 3930816 ~ 3931096 (-)
timm23b timm23b,timm23a,LOC107565600,LOC107669571,LOC107739474,LOC108263229,LOC108426535 other downstream 47378 3422753 ~ 3435580 (-)
dlk2 dlk2,LOC107669558,LOC107696386,LOC107559779,LOC107728069 other downstream 184409 3281337 ~ 3298549 (-)
G90445 znf318,LOC107739464,LOC107655625,LOC107728066,LOC107559766 other downstream 238062 2990418 ~ 3244896 (-)
G90311 polh other downstream 855801 2626328 ~ 2627157 (-)
G90304 NA other downstream 897627 2584196 ~ 2585331 (-)
wu:fj16a03 NA other upstream 408087 3951763 ~ 3955955 (-)
hcar1-3 LOC107590023,LOC107678489,LOC107707144,LOC107699282,LOC107586503,LOC107736563 other upstream 509067 4052743 ~ 4055413 (-)
LOC122356061 LOC107699307,LOC107586507,LOC107708387,LOC108442385,LOC108263686,LOC107727357,LOC106576682,LOC104955882 other upstream 1129290 4672966 ~ 4689168 (-)
col13a1 col13a1,LOC107678564,LOC107708413,LOC107589579,LOC107727372,LOC107586491 other upstream 1147206 4690882 ~ 4779732 (-)
metap1 metap1,LOC107556924,LOC107733733,LOC107695030 other upstream 2376826 5920502 ~ 5926677 (-)

Expression


Co-expression Network