papolg (papolg,LOC107601893,LOC107726947,LOC107666450,LOC107559338,LOC107743495)


Basic Information

Item Value
gene id papolg
gene name papolg,LOC107601893,LOC107726947,LOC107666450,LOC107559338,LOC107743495
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 9596826 ~ 9606503 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255867.1
CGGGAGATGTCTGCACGGTGGGCGCCATATTGGAGCAACAACTATTGTTATAAATTGAGACGGGGCTGCTGCTGGCTGAGTTTACATGTTTTCTGCGTGTTTGTTCTGAAAATATTTGGATATTTCTACGCAAGGTCATGAAAGAGATGTCAACGACTGGTAACAGTACGCTTGGCGGGCAGCAGCCTCGGAAACATTATGGCATCACATCTTCAATCAGCCTGGCCTTTCCCAGAGAGATAGACCATATCTACACTCAGAAGCTTACTGAGGCTATGAAACCGTTTGGAGTGTTTGAGGGTGAAGATGAACTCAATCACAGACTTGCAGTTCTTGGAAAGCTGAATTCATTTGTGAAAGAGTGGATCGCAGAAATCAGTGAATCAAAGAATCTTCCACCATCGGCAGTAGCGAATGTTGGTGGCAAAATCTTTACTTTTGGGTCATATCGGTTGGGAGTGCACACAAAAGgtgCTGATATAGATGCTTTGTGTGTTGCCCCACGTCACGTCGAAAGAACAGACTTCTTTTCATCCTTCTTTGAAAAACTAAAACGGCATGATGAGATTAAAGATCTACGAGCTGTGGAAGATGCATTTGTACCAGTCATCAAATTCAAGTTTGATGGAATTGAGATCGATCTGCTGTTTGCCAGACTCGCTCTCCAGTCAATTCCTGATAACCTGGACCTGAGAGGAGACTCTCTCCTCAGAAACTTGGACATCAGATGCATTCGCAGTCTAAACGGTTGCCGTGTTACAGATGAGATCCTGTATCTGGTGCCTAATAAAGAGAACTTCAGATTAACATTGAGAGCAATTAAACTGTGGGCCAAACgacgAGGAATCTATTCTAACATGCTAGGCTTTCTTGGTGGAGTTTCCTGGGCTATGCTCGTGGCCAGAACTTGTCAGCTCTATCCAAATGCTGTTGCTGCCACACTTGTGCACAAGTTCTTTCTGGTCTTCTCTAAATGgGAATGGCCAAACCCTGTGCTTTTAAAACAACCTGAAGACAGCAATTTAAATCTGCCAGTCTGGGATCCACGAGTGAATCCATCAGACCGGTATCATTTGATGCCAATAATCACTCCAGCATATCCACAACAGAACTCTACCTACAACGTGTCCACTTCCACACGCACCATCATGAGTGAAGAGTTCAAGAATGGTCTAACTGTTACAGATGAGATTCTTCAGGGAAAAGCTGATTGGTCCAAGTTGTTTGAACCTCCCAATTTTTTCCAGAAGTACAAGCATTACATTGTCCTCACAGCCAGTGCATCCACTGAAGAAAACCATCTGGAGTGGATTGGACTGGTAGAATCAAAGATAAGAGTGTTGGTTGGAAATTTGGAGCGCAATGAGTACATCACCCTTGCCCATGTCAACCCACAGTCTTTTCCCGGCTCAAAAGAGAATCACAATGAAAATGAATTTGTTTCCATGTGGTTCATTGGAATCAGCTTTAAAAAACTGGATAACTCTGACTGTGTGAATATTGACTTGACCTATGACATCCAGTCCTTCACAGACACTGTTTATAGGCAGGCCAGCAATATCAACATGCTAAAGGATGGCATGACTATTGAGGCCACACATGTGAAGAAAAAACAGTTGCATCATTACCTGCCTCCTGAACTTGTACAGAGAAAgaagaagAGTTTGGGAGATATAAACCGGAGCTCAAACGGTGGTGGGTCAAAGCGCTGCTCTCTGGATGGCAGTCAGCTGGACAGCTCCAGGGACACGGACATCGGCACTCCATTCAGCTCTCCTACACCAGTCAGCAAACCATGTCAGCCAGCCTCCACACCTGAGGAGAGtaGTCTCAGTCCACCCAAGCATCCAGTCCTTGTATTCATGGACAGCCCACCAGCAACAGAAGTTTCTCCTCCAAAACCAGAACAAGGAATGTCCATTCCAGTCATCGGATCCAaGCCCATCGCCACTCCAGTTGCCAAGCCTCCAGCACCTCCCGCAGGCAACACCATTCCTACAGTGGTGGGCCGCAGTGTGATACCCCGCGTTACCTCTTCCTCCCCTAGCCTGCCTGAACTGCCCAACAGTGTCAATGGTGCACCAAAGAGACCTCACTCTCCATCTCTGGAAGATCCACCTAAGAGGCACAAAGATACAGAGGTGTTTTCTGATGACTCTGCGTTTAAAGAACCGTACCCTCCAAATAGTAATGGCTTGGATGGCGAAGAGGGGCCTGCAGTGGAGGATCTTTCAGCAACCAAACCTATGCCAATACCAACAATTGATACATCAAGATCACAGAGACTACCCAGTAAAGAGCTTCCGGATGCATCTTCCCCAATTCCCACAAGCAACCTTCGTGTGATTAAAAATTCAATCAGGCTCACTCTTAACCGATAACAATGAGCTATCTACAGGTTGTCCCTTAACGAGTGGAACTACACTTGTGTAACAGCAGTGCTGCTTTTAAACTGCTACTGATACTTGGCTGGTCTTCCTGCTTGTTACAGagttagtgtttttgttttgtttttttcttttttccccctaacCCCCAAcccaaagtttttctttttcttttttttttttaaatgccttacTGTGTCAGAATGCTTGCGTAAACATCTATTCAAGCTTTTGAAACAAATTGTACAGTTGATGTAGTTTgtatataactttaaaaatcattgttaGACTTTCTATGCCACctttaatgtagtttttattaacaaaaaaaaagttgaaaaaaaattgtcctgTTTGTCACTGTAAATGAGATTCTTCATTGTTTGTCCGAAGGTTTTCCTTGCAGTCTTTTTGTATTCGCTGTATCGGTTCTGGTTCAGTTTCTGGGAGGACCTTTTGTGTGGGGTgcgtatgtgtgagtgtgtagaTGGACCAGCTTTAGTAACTAAAAACCATGACTCCATGACCTATCCCAGTAAACACTGCTGACACTCCATAGTTTTGTTAACCGCTCCGAACAAAAGAACAGTATTAGATCTAAGGTTTGGGTTTGTTGGGCCAACATTTGAAGCCAGGTTTGGTTTTACAAAGAGTTGTGATTTATTTGAGTCAGTGTTGGTTTTCGCGTGTGCATGTGCATGATTGTGTTTCCCTGCGTCTAGGGCATCACCCCTGCGCCTCCCATGGAGGTCTGGATGGCAGTGTCTCCTGAACTTAACGAACAGAGACTAAATGAGATTTCTGCCCTCTttccatgttgttttttttttctctccatctttccACAATCTACTGTCCTACCCTCGGGATGTACAGAGAACATAAACTTACTATTCATTTTGGGGtttcttaacattttatttatttgtaccgtttttttttttttttttttttttttttatcacaggTATTGCAGTTGAACAACTTTATTATTCTAGACATTAACTTCAGCGCTCGGTTTGAATTTTCCTTACCTTACCTTtaggacaataaaaaaaaaatctacttgtcATTCTTTTTGTAGGGCAAAAAGTTGTATTTGAAAGggtatttttgtatgtaatgtaaattGCCTTCTTTACATTAAGAacataaaattcacaaaacCCCAAA
>XM_043255869.1
CGGGAGATGTCTGCACGGTGGGCGCCATATTGGAGCAACAACTATTGTTATAAATTGAGACGGGGCTGCTGCTGGCTGAGTTTACATGTTTTCTGCGTGTTTGTTCTGAAAATATTTGGATATTTCTACGCAAGGTCATGAAAGAGATGTCAACGACTGGTAACAGTACGCTTGGCGGGCAGCAGCCTCGGAAACATTATGGCATCACATCTTCAATCAGCCTGGCCTTTCCCAGAGAGATAGACCATATCTACACTCAGAAGCTTACTGAGGCTATGAAACCGTTTGGAGTGTTTGAGGGTGAAGATGAACTCAATCACAGACTTGCAGTTCTTGGAAAGCTGAATTCATTTGTGAAAGAGTGGATCGCAGAAATCAGTGAATCAAAGAATCTTCCACCATCGGCAGTAGCGAATGTTGGTGGCAAAATCTTTACTTTTGGGTCATATCGGTTGGGAGTGCACACAAAAGgtgCTGATATAGATGCTTTGTGTGTTGCCCCACGTCACGTCGAAAGAACAGACTTCTTTTCATCCTTCTTTGAAAAACTAAAACGGCATGATGAGATTAAAGATCTACGAGCTGTGGAAGATGCATTTGTACCAGTCATCAAATTCAAGTTTGATGGAATTGAGATCGATCTGCTGTTTGCCAGACTCGCTCTCCAGTCAATTCCTGATAACCTGGACCTGAGAGGAGACTCTCTCCTCAGAAACTTGGACATCAGATGCATTCGCAGTCTAAACGGTTGCCGTGTTACAGATGAGATCCTGTATCTGGTGCCTAATAAAGAGAACTTCAGATTAACATTGAGAGCAATTAAACTGTGGGCCAAACgacgAGGAATCTATTCTAACATGCTAGGCTTTCTTGGTGGAGTTTCCTGGGCTATGCTCGTGGCCAGAACTTGTCAGCTCTATCCAAATGCTGTTGCTGCCACACTTGTGCACAAGTTCTTTCTGGTCTTCTCTAAATGgGAATGGCCAAACCCTGTGCTTTTAAAACAACCTGAAGACAGCAATTTAAATCTGCCAGTCTGGGATCCACGAGTGAATCCATCAGACCGGTATCATTTGATGCCAATAATCACTCCAGCATATCCACAACAGAACTCTACCTACAACGTGTCCACTTCCACACGCACCATCATGAGTGAAGAGTTCAAGAATGGTCTAACTGTTACAGATGAGATTCTTCAGGGAAAAGCTGATTGGTCCAAGTTGTTTGAACCTCCCAATTTTTTCCAGAAGTACAAGCATTACATTGTCCTCACAGCCAGTGCATCCACTGAAGAAAACCATCTGGAGTGGATTGGACTGGTAGAATCAAAGATAAGAGTGTTGGTTGGAAATTTGGAGCGCAATGAGTACATCACCCTTGCCCATGTCAACCCACAGTCTTTTCCCGGCTCAAAAGAGAATCACAATGAAAATGAATTTGTTTCCATGTGGTTCATTGGAATCAGCTTTAAAAAACTGGATAACTCTGACTGTGTGAATATTGACTTGACCTATGACATCCAGTCCTTCACAGACACTGTTTATAGGCAGGCCAGCAATATCAACATGCTAAAGGATGGCATGACTATTGAGGCCACACATGTGAAGAAAAAACAGTTGCATCATTACCTGCCTCCTGAACTTGTACAGAGAAAgaagaagAGTTTGGGAGATATAAACCGGAGCTCAAACGGTGGTGGGTCAAAGCGCTGCTCTCTGGATGGCAGTCAGCTGGACAGCTCCAGGGACACGGACATCGGCACTCCATTCAGCTCTCCTACACCAGTCAGCAAACCATGTCAGCCAGCCTCCACACCTGAGGAGAGTCTCAGTCCACCCAAGCATCCAGTCCTTGTATTCATGGACAGCCCACCAGCAACAGAAGTTTCTCCTCCAAAACCAGAACAAGGAATGTCCATTCCAGTCATCGGATCCAaGCCCATCGCCACTCCAGTTGCCAAGCCTCCAGCACCTCCCGCAGGCAACACCATTCCTACAGTGGTGGGCCGCAGTGTGATACCCCGCGTTACCTCTTCCTCCCCTAGCCTGCCTGAACTGCCCAACAGTGTCAATGGTGCACCAAAGAGACCTCACTCTCCATCTCTGGAAGATCCACCTAAGAGGCACAAAGATACAGAGGTGTTTTCTGATGACTCTGCGTTTAAAGAACCGTACCCTCCAAATAGTAATGGCTTGGATGGCGAAGAGGGGCCTGCAGTGGAGGATCTTTCAGCAACCAAACCTATGCCAATACCAACAATTGATACATCAAGATCACAGAGACTACCCAGTAAAGAGCTTCCGGATGCATCTTCCCCAATTCCCACAAGCAACCTTCGTGTGATTAAAAATTCAATCAGGCTCACTCTTAACCGATAACAATGAGCTATCTACAGGTTGTCCCTTAACGAGTGGAACTACACTTGTGTAACAGCAGTGCTGCTTTTAAACTGCTACTGATACTTGGCTGGTCTTCCTGCTTGTTACAGagttagtgtttttgttttgtttttttcttttttccccctaacCCCCAAcccaaagtttttctttttcttttttttttttaaatgccttacTGTGTCAGAATGCTTGCGTAAACATCTATTCAAGCTTTTGAAACAAATTGTACAGTTGATGTAGTTTgtatataactttaaaaatcattgttaGACTTTCTATGCCACctttaatgtagtttttattaacaaaaaaaaagttgaaaaaaaattgtcctgTTTGTCACTGTAAATGAGATTCTTCATTGTTTGTCCGAAGGTTTTCCTTGCAGTCTTTTTGTATTCGCTGTATCGGTTCTGGTTCAGTTTCTGGGAGGACCTTTTGTGTGGGGTgcgtatgtgtgagtgtgtagaTGGACCAGCTTTAGTAACTAAAAACCATGACTCCATGACCTATCCCAGTAAACACTGCTGACACTCCATAGTTTTGTTAACCGCTCCGAACAAAAGAACAGTATTAGATCTAAGGTTTGGGTTTGTTGGGCCAACATTTGAAGCCAGGTTTGGTTTTACAAAGAGTTGTGATTTATTTGAGTCAGTGTTGGTTTTCGCGTGTGCATGTGCATGATTGTGTTTCCCTGCGTCTAGGGCATCACCCCTGCGCCTCCCATGGAGGTCTGGATGGCAGTGTCTCCTGAACTTAACGAACAGAGACTAAATGAGATTTCTGCCCTCTttccatgttgttttttttttctctccatctttccACAATCTACTGTCCTACCCTCGGGATGTACAGAGAACATAAACTTACTATTCATTTTGGGGtttcttaacattttatttatttgtaccgtttttttttttttttttttttttttttatcacaggTATTGCAGTTGAACAACTTTATTATTCTAGACATTAACTTCAGCGCTCGGTTTGAATTTTCCTTACCTTACCTTtaggacaataaaaaaaaaatctacttgtcATTCTTTTTGTAGGGCAAAAAGTTGTATTTGAAAGggtatttttgtatgtaatgtaaattGCCTTCTTTACATTAAGAacataaaattcacaaaacCCCAAA
>XM_043255870.1
CGGGAGATGTCTGCACGGTGGGCGCCATATTGGAGCAACAACTATTGTTATAAATTGAGACGGGGCTGCTGCTGGCTGAGTTTACATGTTTTCTGCGTGTTTGTTCTGAAAATATTTGGATATTTCTACGCAAGGTCATGAAAGAGATGTCAACGACTGGTAACAGTACGCTTGGCGGGCAGCAGCCTCGGAAACATTATGGCATCACATCTTCAATCAGCCTGGCCTTTCCCAGAGAGATAGACCATATCTACACTCAGAAGCTTACTGAGGCTATGAAACCGTTTGGAGTGTTTGAGGGTGAAGATGAACTCAATCACAGACTTGCAGTTCTTGGAAAGCTGAATTCATTTGTGAAAGAGTGGATCGCAGAAATCAGTGAATCAAAGAATCTTCCACCATCGGCAGTAGCGAATGTTGGTGGCAAAATCTTTACTTTTGGGTCATATCGGTTGGGAGTGCACACAAAAGgtgCTGATATAGATGCTTTGTGTGTTGCCCCACGTCACGTCGAAAGAACAGACTTCTTTTCATCCTTCTTTGAAAAACTAAAACGGCATGATGAGATTAAAGATCTACGAGCTGTGGAAGATGCATTTGTACCAGTCATCAAATTCAAGTTTGATGGAATTGAGATCGATCTGCTGTTTGCCAGACTCGCTCTCCAGTCAATTCCTGATAACCTGGACCTGAGAGGAGACTCTCTCCTCAGAAACTTGGACATCAGATGCATTCGCAGTCTAAACGGTTGCCGTGTTACAGATGAGATCCTGTATCTGGTGCCTAATAAAGAGAACTTCAGATTAACATTGAGAGCAATTAAACTGTGGGCCAAACgacgAGGAATCTATTCTAACATGCTAGGCTTTCTTGGTGGAGTTTCCTGGGCTATGCTCGTGGCCAGAACTTGTCAGCTCTATCCAAATGCTGTTGCTGCCACACTTGTGCACAAGTTCTTTCTGGTCTTCTCTAAATGGTGA

Function

symbol description
papolg Predicted to enable polynucleotide adenylyltransferase activity. Predicted to be involved in mRNA polyadenylation. Predicted to act upstream of or within RNA 3'-end processing; RNA polyadenylation; and mRNA processing. Predicted to be active in nucleus. Orthologous to human PAPOLG (poly(A) polymerase gamma).

NR:

description
poly(A) polymerase gamma-like

GO:

id name namespace
GO:0006378 mRNA polyadenylation biological_process
GO:0005634 nucleus cellular_component
GO:0003723 RNA binding molecular_function
GO:0004652 polynucleotide adenylyltransferase activity molecular_function

KEGG:

id description
K14376 PAP; poly(A) polymerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255867.1 True 3560 mRNA 0.43 23 9596826 9606503
XM_043255869.1 False 3557 mRNA 0.43 23 9596826 9606503
XM_043255870.1 False 980 mRNA 0.44 9 9602443 9606503

Neighbor

gene id symbol gene type direction distance location
rel LOC107726948,LOC107666554,LOC107601890,LOC107655447,LOC107559337,LOC107743496 coding downstream 2586 9584404 ~ 9594240 (-)
pdlim1 pdlim1,LOC107666525,LOC107726967,LOC107601889,LOC107655446,LOC107743498,LOC107559336 coding downstream 22251 9569098 ~ 9574575 (-)
sgpl1 sgpl1,LOC107726953,LOC107601887,LOC107655444,LOC107559334,LOC107666355 coding downstream 32753 9553287 ~ 9564073 (-)
si:dkey-192p21.6 si:dkey-192p21.6,LOC107601802,LOC107726935,LOC107666356,LOC107655416,LOC107559314,LOC100702339 coding downstream 47859 9523227 ~ 9548967 (-)
ret ret,LOC107726966,LOC107666456,LOC107743501,LOC107655443 coding downstream 76849 9498234 ~ 9519977 (-)
LOC122356762 vrk2,LOC107718826,LOC107693217,LOC107560458,LOC107585344 coding upstream 460422 10066925 ~ 10079168 (-)
LOC122356208 pcgf6,LOC107588739,LOC107707701,LOC107656932,LOC107585366,LOC107673880 coding upstream 692654 10299157 ~ 10305442 (-)
LOC122356628 LOC107707586,LOC107588654,LOC107688299,LOC107716331,LOC107673895,LOC107585321 coding upstream 738954 10345457 ~ 10349224 (-)
chata chata,LOC107588646,LOC107683741,LOC107707518,LOC107716339,LOC107673961,LOC107585314 coding upstream 1028462 10634965 ~ 10641860 (-)
slc18a3a slc18a3,slc18a3a,LOC107708354,LOC107683739,LOC107716340,LOC108442244 coding upstream 1036056 10642559 ~ 10645119 (-)
G92391 NA non-coding downstream 1546 9595026 ~ 9595280 (-)
G92367 LOC107666417,LOC107726946,LOC107655437,LOC107743505,LOC107601798 non-coding downstream 142519 9451223 ~ 9454307 (-)
G92314 NA non-coding downstream 146138 9450396 ~ 9450688 (-)
G92295 gsto1,gsto2,LOC107655421,LOC107743610,LOC107666511,LOC107601880,LOC107726961,LOC107559317,LOC107666561,LOC107726960,LOC107559318,LOC107743609,LOC107601879 non-coding downstream 191166 9398804 ~ 9405660 (-)
G92289 NA non-coding downstream 255756 9340345 ~ 9341070 (-)
G92407 NA non-coding upstream 33966 9640469 ~ 9641201 (-)
LOC122356802 NA non-coding upstream 92510 9699013 ~ 10050383 (-)
G92427 NA non-coding upstream 94130 9700633 ~ 9700864 (-)
G92548 NA non-coding upstream 633763 10240266 ~ 10243061 (-)
G92550 NA non-coding upstream 642417 10248920 ~ 10249725 (-)
G92267 NA other downstream 481275 9115093 ~ 9115551 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 1548925 8043565 ~ 8047901 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other downstream 1780447 7809849 ~ 7816379 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 3097253 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 3200400 6358201 ~ 6396426 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 567910 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 1025747 10632250 ~ 10634566 (-)
G92819 NA other upstream 1318441 10924944 ~ 10935331 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 1594049 11200552 ~ 11218985 (-)
zdhhc16a zdhhc16,zdhhc16a,LOC107708229,LOC107668773,LOC107673955,LOC107548628 other upstream 1918900 11525403 ~ 11532457 (-)

Expression


Co-expression Network