LOC122356812 (LOC107725429)


Basic Information

Item Value
gene id LOC122356812
gene name LOC107725429
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 9169279 ~ 9170253 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255883.1
ATGAGTAAGTCAACGGCTCGTGATAAAGGACTGCTCGCTGATCTGAGAGTCACTCATGTTGTAAACTGCGCCGAGGGACTGCATCGCATCAACACAGGCGGCCAGCTCTACTCAGACACGAGTATAAGTTACTGTGGAGTGCAGGCTTCAGATCACCCACAGTTTGATTTGAGCCAGTATTTCTGCTCCACTGCATCCTTCATTAAAGCTGCACTCCCTCAAAATGGCAAAGTGCTGGTTCACTGTGCGATGGGAGTGAGCCGCTCCGGAGCCGTGGTCCTGGCCTTCCTCATGATGTGCGAGAACCTCACTCTTACGGACGCCATCATAGCTGTCAGGTTGAACAGGGACATCTGTCCCAACTCAGGCTTTCTAGAACAGCTGAGAACTCTGGATATCCAATTAAAGAgataatacacacaaaaaataaagattctgtCATTTAGTCACAGTCATATGTTTTTCAAACCTGTATAACTGATCGTCGTAGCTTTTCAAGGTGCAGTCATATGGGTACCTTCAATAGATATCGAAAAAGCATACATTATATGTTTGATCATTTCTACTTTTGTAGCAGTCTGGAAAGAtaggagggtgagtaaatgatattttgaaaaCGTGATCACATCCTTTTAAGATAACAAaagcactgaaaaataaaatgtt

Function

NR:

description
PREDICTED: dual specificity protein phosphatase 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255883.1 True 666 mRNA 0.43 3 9169279 9170253

Neighbor

gene id symbol gene type direction distance location
si:ch211-223p8.8 LOC107552909,LOC107743613,LOC107552922,LOC107667280 coding upstream 8557 9159647 ~ 9160722 (+)
col17a1b LOC107667282,LOC107743515 coding upstream 31850 9120348 ~ 9137429 (+)
cfap43 cfap43,LOC107743591,LOC107666552,LOC107601792,LOC107667278,LOC107578899,LOC107683315 coding upstream 53102 9103033 ~ 9116177 (+)
adam8a adam8,LOC107725440,LOC107666510,LOC107743615,LOC107676563 coding upstream 88535 9072842 ~ 9080744 (+)
msx3 msx3,LOC107743518,LOC107552925,LOC107601809,LOC107725487,LOC107666509 coding upstream 100535 9066080 ~ 9068744 (+)
ap3m1 LOC107743512,LOC107655430,LOC107726964,LOC107559324,LOC107601875,LOC107666495 coding downstream 168025 9338278 ~ 9342544 (+)
chuk chuk,LOC107726965,LOC107601877,LOC107559325,LOC107743510 coding downstream 219969 9390222 ~ 9397047 (+)
LOC122356357 gsto1,LOC107601880,LOC107726961,LOC107743610,LOC107559317,LOC107655421,LOC107666511 coding downstream 227236 9397489 ~ 9400354 (+)
LOC122356356 gsto2,LOC107726960,LOC107666561,LOC107559318,LOC107601879,LOC107743609 coding downstream 231734 9401987 ~ 9404636 (+)
calhm3 calhm3,LOC107726959,LOC107666391,LOC107743606,LOC107559321,LOC107578949 coding downstream 239498 9409751 ~ 9412120 (+)
G92111 NA non-coding upstream 24768 9140217 ~ 9144511 (+)
G92108 erlin1,LOC107743516,LOC107725471,LOC107666491,LOC107601865,LOC107676597 non-coding upstream 71374 9050367 ~ 9097905 (+)
G92087 slc1a4,LOC107725464,LOC107552941 non-coding upstream 203690 8929442 ~ 8965589 (+)
G92066 NA non-coding upstream 272370 8836716 ~ 8896909 (+)
G92048 NA non-coding upstream 378227 8789731 ~ 8791052 (+)
G92147 NA non-coding downstream 93811 9264064 ~ 9275699 (+)
G92313 NA non-coding downstream 280193 9450446 ~ 9450689 (+)
G92334 mcmbp,LOC107726945,LOC107601886,LOC107559330 non-coding downstream 309168 9479421 ~ 9479752 (+)
LOC122356835 NA non-coding downstream 400736 9570989 ~ 9583671 (+)
G92361 NA non-coding downstream 422166 9592419 ~ 9594277 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other upstream 5165 9161517 ~ 9164114 (+)
spef1 zgc:66426,LOC107601866,LOC107725472,LOC107666492,LOC107743614 other upstream 80158 9080848 ~ 9089121 (+)
fuom fuom,LOC107676595,LOC107666397,LOC107601808 other upstream 141370 9025943 ~ 9027909 (+)
sf3b5 sf3b5,LOC107601807 other upstream 429184 8739036 ~ 8740095 (+)
pcnx2 pcnxl2,LOC107725461,LOC107601842,LOC107743596,LOC107666362,LOC107676602,LOC107552953 other upstream 486227 8666267 ~ 8683052 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other downstream 259925 9430178 ~ 9434605 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other downstream 1034860 10205113 ~ 10249725 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other downstream 1245987 10416240 ~ 10420426 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other downstream 1794602 10964855 ~ 10968914 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other downstream 2043273 11213526 ~ 11218175 (+)

Expression


Co-expression Network