LOC122356827 (LOC107736840,LOC107664175,LOC107568695,LOC107747274)


Basic Information

Item Value
gene id LOC122356827
gene name LOC107736840,LOC107664175,LOC107568695,LOC107747274
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 13798911 ~ 13801239 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255899.1
AAAATAGCCATAGCTTTCAGAGTGCAAGGCCAAATGACATAGGATGAAGGCTGTTCGTAATctgttgatttatatattttccacCTATCTCCTGGTTATGTTTGGATATACTGGTGCCCAAGATTTCTGGTGTTCCACGCTGGTAAAAGGAGTTATCTATGGATCTTACTcgataaatgaaatgtttcccAAGAACTTCACAAACTGCACTTGGACGTTGGAGAACCCAGATCCTACCAAATACAGCATCTACCTAAAACTTTACAAACGAGAAATTAGCTGTTCCGAATTCTCTCTGCTGGCTTACCAGTTCGACCACTTCTCTCACGAGAAGATCAACGAGCTGTTGAGGATCAACGAGTCCATCGTGCACCTGTGTGACGACGCCAagaatatttatgtgtttttgcattacgACAAAAATTTCGTGCAGCTCCGGCGAGTGTTTCCCTACGACTACAACGGATTGACGACCAAGAagacggaggaggaggagaggtcTGTGGTGGAGTTTGTGGTTTTAAACAAGGCGAGCCCGAGTCAGTTTGGATGTCAGGTGTTGTGCACGTGGTTGAAAACTGCTTGA

Function

NR:

description
PREDICTED: adhesion G protein-coupled receptor B3-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255899.1 True 586 mRNA 0.44 2 13798911 13801239

Neighbor

gene id symbol gene type direction distance location
kcnk1b kcnk1b,kcnk1,LOC107705375,LOC107654970,LOC107680317,LOC107739872,LOC107553189,LOC108415485 coding upstream 71887 13721418 ~ 13727024 (+)
agpat4 agpat4,LOC107739871,LOC107553196,LOC107089284 coding upstream 106562 13686039 ~ 13692349 (+)
gpr75 gpr75,LOC107602942,LOC107654975,LOC107683917,LOC107705414,LOC107553188,LOC107739897 coding upstream 120279 13675767 ~ 13678632 (+)
psme4a psme4a,LOC107602941,LOC107654976,LOC107679520,LOC107739869 coding upstream 123863 13650908 ~ 13675048 (+)
thbs2a thbs2a,thbs2,LOC107705413,LOC107654977,LOC107739867 coding upstream 153330 13626598 ~ 13645581 (+)
LOC122356401 agpat4,LOC107739871,LOC107553196 coding downstream 51348 13852587 ~ 13858805 (+)
mfsd2aa mfsd2aa,LOC107654966,LOC107705421,LOC107602949,LOC107739898 coding downstream 116959 13918198 ~ 13929237 (+)
si:ch211-67f13.7 LOC107602918 coding downstream 129384 13930623 ~ 13936869 (+)
LOC122356869 ttc9,LOC107602957,LOC107553202,LOC107654962,LOC107739879 coding downstream 211010 14012249 ~ 14015870 (+)
cnih1 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding downstream 389943 14191182 ~ 14196252 (+)
G93512 NA non-coding upstream 450873 13346861 ~ 13348038 (+)
LOC122357146 NA non-coding upstream 582154 13216658 ~ 13216757 (+)
G93485 sptlc3,LOC107705357,LOC107662809,LOC107654988,LOC107600566 non-coding upstream 607116 13187585 ~ 13191795 (+)
G93474 NA non-coding upstream 634598 13164037 ~ 13164313 (+)
G93306 NA non-coding upstream 1196370 12602191 ~ 12602541 (+)
G93649 NA non-coding downstream 60812 13862051 ~ 13862660 (+)
G93659 LOC107654964,LOC107680818,LOC107602919,LOC107705424,LOC107553200,LOC107739876 non-coding downstream 144091 13945330 ~ 13950605 (+)
G93592 NA non-coding downstream 230143 14031382 ~ 14161320 (+)
G93685 LOC107553176,LOC107654957,LOC107705429,LOC107602958 non-coding downstream 289286 14090525 ~ 14091232 (+)
G93723 NA non-coding downstream 423744 14224983 ~ 14227711 (+)
LOC122356417 mfsd2aa,LOC107654966,LOC107705421,LOC107602949,LOC107739898 other upstream 38177 13749135 ~ 13760734 (+)
tasp1 tasp1,LOC107705405,LOC107654993,LOC107600565,LOC107662811,LOC107585512,LOC107739887 other upstream 640471 13134473 ~ 13158440 (+)
mgme1 mgme1,LOC107675546,LOC107654997,LOC107585523 other upstream 1209913 12586886 ~ 12588998 (+)
G93296 rrbp1 other upstream 1223699 12571631 ~ 12575212 (+)
jag2a jag2a,LOC107654986,LOC107675567,LOC107724379,LOC107585503,LOC107705348,LOC107600569 other upstream 1263840 12502385 ~ 12535071 (+)
gmfb gmfb,LOC107705437,LOC107553212,LOC107602964,LOC102779377 other downstream 384076 14185315 ~ 14188993 (+)
frmd6 frmd6,LOC107654939,LOC107683538,LOC107736757,LOC107726597 other downstream 552876 14354115 ~ 14369557 (+)
LOC122357077 zgc:153049,LOC107747287,LOC107736842,LOC107665562,LOC107664273,LOC107573610,LOC107553186 other downstream 1305219 15106458 ~ 15226722 (+)
fam135a LOC107747270,LOC107665594,LOC107736843,LOC107664195,LOC107564672 other downstream 1453835 15255074 ~ 15275234 (+)
tarbp1 tarbp1,si:dkey-85a20.4,LOC107736847,LOC107564676,LOC107683215 other downstream 1494610 15295849 ~ 15314656 (+)

Expression


Co-expression Network