nusap1 (nusap1,LOC107585493,LOC107724270)


Basic Information

Item Value
gene id nusap1
gene name nusap1,LOC107585493,LOC107724270
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12395781 ~ 12399528 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255917.1
TATTTTTCAAACGGCAATCCCACCTAAACAAACCGAGCTGTTTAGATCACAGTGTCGTCAATTTCGGTATCACGTTCATATAAgttatattaagattttttacaCGGAGTTTATCCACAATATGGATTTGGATTCGCTTAAATATGCGGAACTGCAGCGCCTCGCGAAAGAGGTTGGGCTGAAAGCAAATATGAAGGCTGAAAAGCTATTGAAAGCtttaaaagaacactttttCCTACAACAACACCAGACAACTGAAAATGATAATGATGCAGCCGCCGCGGACGGGCACAGTGTCACGGACGAGCAGGGCGGGCACGCGGTAACGTTTGTGACCGAGCGCCGGGGAAAAGGCCGCACTGTCAAGAGAAAGCTCAGTGACCCCACTCCTGTTCCTGCTCAGaaTGAAGTAAAGCCAGCACAAGAGGGCGGCCGAAGGGGCTCCAAAAGGAGGAAGGTGTCCTCACCAAAGGACACGCAGACACCAGTTCCACCTGAAACATCTACTAAAGATCCTGTAGAGAAAGGTCTAGAATCTGTCGAAACAAATCCAGAATCTTTAGGTGCTCCTGCCGAGCCCAGTGTTAAAGGTGTGGGGAGGAGAACAGTGGGTAAAATCCCTCGTCTTGAGGGCCTGATGAAGAGAAAACCTGCACTGCGGCCGACAACTCCTAATTTCAAGAAACTCCATGAGGCTCACTTCAAAAAGATGGAGTCCATTGATTCTTATGTTCAAAGGAAGAATAAACAAATGGAGGTGCTCAGGAATTCTGTCAAAGAGCTGAAGACTCTGTCAGAGAAGACGCTGATGAAATCGGTTGAGGCAAAGACTCAAACTAAGGTGCCTGCTAGCAGAGTCTCTCTCTTCAGTCCTGGAGtgcaggagaaaaaaacattggcaGAAAAGCGCAGGCTCACTCAGCAGTCTGCCAGCAAGTCTGCTTTGAAGGACAGCACCACCTTCAGGCCAACTGTCCTCACAACCAATAAAATCAATGTCCGGTTCTCACAGACCACTCAAGATAACGAATATAAGCGTTCACTGGTAAAGACTCCAGCTCGTATGTCTCCTTTTGTCCCTCTTACCTCCACTCCAGGGAGGAAATCTGATGTTCACACCAAACCTGAACTTAATAAAAGTATTGGCGCCATCAAAACACCCGGAGCTACTccgtttgtttttaatgggaaCAACAGTTTGTCAGTCACCCCTGGCGCCACCAAGAAGAACACATTTGATCTTAAGGCCAGTCTCTCTCGTCCACTCAACTACAAACCACACAAAGGAAAGCTGAAGCCATTTGGAGCTCAACAGGAGAACACAGGACTTAATAAATCTCAGACTGTTCCTTCACACCAGAAAAACTATAAACAGCACCAAGTTCAAACCAGagaggAGCGACGTGCCAAGCAGACAGAAGAccgaaaacaaaagaaagagaagatgtTGGGTGCCAGGCGAGGTCTGGTCATGGCCTAACTCcagtgtttttactgtttgcTATTTTATACACTCACTGTAcatgtt

Function

symbol description
nusap1 Predicted to enable microtubule binding activity. Acts upstream of or within neural crest cell migration. Predicted to be located in spindle microtubule. Predicted to be active in mitotic spindle and nucleolus. Is expressed in blood island; brain; head; neural crest; and proliferative region. Orthologous to human NUSAP1 (nucleolar and spindle associated protein 1).

NR:

description
PREDICTED: nucleolar and spindle-associated protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255917.1 True 1528 mRNA 0.46 12 12395781 12399528

Neighbor

gene id symbol gene type direction distance location
rtf1 rtf1,LOC107655008,LOC107588567 coding downstream 4032 12379697 ~ 12391749 (-)
golga5 golga5,LOC107588574,LOC107705390,LOC107585491 coding downstream 16564 12373606 ~ 12379217 (-)
trip11 trip11,LOC107655016,LOC107588575,LOC107585490,LOC107675555 coding downstream 22790 12354697 ~ 12372991 (-)
fbln5 fbln5,LOC107585489,LOC107724235,LOC107588577,LOC107655017,LOC107705389,LOC107675578 coding downstream 44255 12341913 ~ 12351526 (-)
LOC122357133 tc2n,LOC107705388,LOC107654930,LOC107724545,LOC107588684,LOC107675517 coding downstream 54005 12333170 ~ 12341776 (-)
LOC122356084 LOC107705397,LOC107654925,LOC107588565,LOC107675586 coding upstream 41511 12441039 ~ 12444878 (-)
btbd6a btbd6a,LOC107724364,LOC107588564,LOC107705400,LOC107655006,LOC107585501 coding upstream 58343 12457871 ~ 12461979 (-)
rrbp1a rrbp1,LOC107705351,LOC107654983,LOC107585504,LOC107675545 coding upstream 160630 12560158 ~ 12575184 (-)
snx5 snx5,LOC107654994,LOC107705401,LOC107724504 coding upstream 180620 12580148 ~ 12586465 (-)
si:dkey-76k16.6 LOC107654998,LOC107585507,LOC107724435,LOC107675547,LOC107577850,LOC107600570 coding upstream 189416 12588944 ~ 12591353 (-)
LOC122357111 NA non-coding downstream 148841 12121940 ~ 12246940 (-)
G93315 NA non-coding downstream 228883 12114926 ~ 12166898 (-)
G93148 NA non-coding downstream 353852 12041695 ~ 12041929 (-)
G93144 NA non-coding downstream 358963 12036612 ~ 12036818 (-)
LOC122357025 LOC107585516,LOC108412594,LOC105899417 non-coding downstream 366159 11983711 ~ 12029622 (-)
LOC122356854 NA non-coding upstream 2143 12401671 ~ 12406933 (-)
G93392 jag2a,LOC107654986,LOC107705348,LOC107724379,LOC107675567,LOC107600569,LOC107585503 non-coding upstream 132453 12531981 ~ 12533886 (-)
G93394 NA non-coding upstream 134458 12533986 ~ 12535068 (-)
G93460 NA non-coding upstream 705551 13105079 ~ 13105684 (-)
G93470 NA non-coding upstream 757402 13156930 ~ 13158437 (-)
vti1b vti1b,LOC107655020,LOC107705385,LOC107724223,LOC107675543 other downstream 102187 12278454 ~ 12293594 (-)
utp25 diexf,LOC107668835,LOC107707040,LOC107675582,LOC107757128 other downstream 596749 11771428 ~ 11799032 (-)
six1a six1a,six1,LOC107588725,LOC107675533,LOC107708210,LOC107668775,LOC108434988 other downstream 747746 11643930 ~ 11648035 (-)
zdhhc16a zdhhc16,zdhhc16a,LOC107708229,LOC107668773,LOC107673955,LOC107548628 other downstream 863324 11525403 ~ 11532457 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other downstream 1176796 11200552 ~ 11218985 (-)
tmem234 tmem234,LOC107675523,LOC107576456 other upstream 29669 12429197 ~ 12430778 (-)
LOC122356414 NA other upstream 157549 12557077 ~ 12597302 (-)
LOC122356823 LOC107654911,LOC107705409,LOC107600568,LOC107683712 other upstream 910424 13309952 ~ 13325051 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other upstream 1120885 13520413 ~ 13558834 (-)
srd5a2b srd5a2b,LOC107739895,LOC107654923,LOC107683892,LOC107705374,LOC107602938 other upstream 1164894 13564422 ~ 13568025 (-)

Expression


Co-expression Network