aifm2 (aifm2,LOC107699314,LOC107708424,LOC107678552)


Basic Information

Item Value
gene id aifm2
gene name aifm2,LOC107699314,LOC107708424,LOC107678552
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 4957649 ~ 4962720 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255962.1
GTACAACATGGCCCTATAAGCAGAAATAGCTGAACACATCCGTGTTAAAGAACACTATACGGAGCCTTACATAATCACCGCACACTAGTTGTGAAGCATCATGGGAGGTCAGCTGTCCATCGATGAGAAAGTCCATGTGGTGATTGTTGGCGGTGGTTTTGGAGGCATTGCAGCCGCTCAACACCTTAAACATCATGGGGTGCCCTTCATGCTCATTGACATCCTGGATGCGTTTCATCACAACGTTGCAGCGCTGCGTGCCTCAGTTCAAGCTGGTTTTGCGAAACAGACGTTCATACCATACAAAGAGACATTTGGACTGAACTTCCTCCAAGGCCGTGTCATACAGATAGACACAGAAACGCAGACTGTGGTACTTGACAATGGAAAGCAAATACGGTACTCACACCTCATTCTGTGCACCGGAACAAGCGGACATTTCCCAGGAAAACACAATTCGGTGGACACCTACCAGTCAGCCATTCAGAAGTATGAGAACTTTGTCAAAGTGATCCAGGAGGCGAGCGCGGTCGTAGTTGTCGGAGGCGGGACCACGGGTGTTGAACTGGCTGCTGAGATCAGGACTGAATTTACCGACAAGAAGGTGACTCTGATCCACCCGCGTGAGGAGGTGGCTGATCCTGATCTGTTGCCGTCTGTCAAAGAACAAGCCAAACAGGTGCTGCTGAAAAAGGGGGTGGAGCTTCTGCTAGGACAGAAAGTGACAAACCTCGATGATCTGCAACTGAATGTGTTTCGGAAAGACATGGTGGTCAAGACCAATAAAAATGAGCAGGTCGTTGCTGATCTAGTCATCTGCTGCACAGGGAGTAAAATCAACTCTGAAGCATACAGGTCCAGTCTTAATGCATGCATGACAGAGAGTGGAGCTCTGAAGGTGAACCAGCACCTGCAAGTAGAAGGCTTTGACAATGTGTATGCTGTGGGTGACTGCGTCAATCTCAAAGAACCCAAGATGGCGTATCATGCCGGACTTCACGCTGCGGTTGCTGCCACCAATATCATAAACAGTTTGACGGGAAAATCTTTAACCTCATATCGCACAGGAAATGTGACTATGCTGATCGCTATGGGCAAGGATGCTGGAGTAGGCCAGTTTAACGGCTGTAAACTACCTCAGTTTCTGGTCACCAAGGGAAAGAGCCAAAGCTTGCTGCTGTGGAAGAGCTGGAGGGAAATGGGCCAAAAAGCCCCTAACTGACACAAGGTTATCAAAAGGGTTTACATCATACtcaaaatgtatatgttaaCTATGTTAAGTATAACACAGTTCCATCTTACttgattacttttttataaaataatttttacatttatcattgTCTTATTAAATTAAGCCAACAGAAGGAAGCTTCATATTGTACAAATAACAGAGATTATATACTTCTATATAACATTGCTCGTAATATTTTGTAGAACAATCAAATGCACCGTTTTATAGTACTTTGTTCTAGTGTCTTCCTGCATTGATCACGTGACGTGTGATAACTTATTGGTGTTTCTCCACTAGAGGGCAACATATATCAAATCATTGTAGCCCGGACAATGAAACAAGATGATGCTGAGTCATAGATTTGGTTTTTCACAATTGCATATTGAAATCAAtatctaaaaatgcacaaatggaCGCAGTGAGTTCACTCGGTGAATGCCTTTACTCACGTTGTTTTCTGAGTGAATTCACGCTGGAGAATGGAGGATTAGCCTAAATCAGTTTTTAAGAAGCCATTAAAGCGCCTAATCAGGTTTGTTTCATGCATCACATATCAACGGAGTGGTGATATCACGTTGGAGCTAAAAGGGTTGTTTTTGCAGTTTACATTCAATTTAGTGTAAAAGGTCTATTGgctgttcattaaaataataaatattaatttgcagTGCGTTCATCTGATTGAAAAGATAAGTGCACTGCACTATAAGACGCACTGCCAAGAGAACTGGAGATGTTCACAAAGAGCTGGAAATCTCTGCAAAATGCCCCGTAATGCTGCAGTCATGTCTGGAGCTGGTGGAAGGCCGTTGGTATTTAGTGTTTAAGTCTTGATATATTGTCCTGAAATCAAggcactgtgttttttttatatcacattACACATCTTTGCCGGTTGGCCTTGGATACAAGTggtctttaaatgcaatgctGCCATAAATTGTAACTCTGAAAAGCTCACAAGCTCCCAACCCATTGTTTGAGTCGAGGCACACAGGCGCTGATTCAATTCAGAGCTTGCTTACTCCGATACGAATGTCAGTTAGCATTTTTTATGTCTGTTCATGTTTGTCATTTGTTGTTCTTATTGTTAAGGATGATCTTTGCCATGCAGGTTTATATTGTTTCaacttgtatttttaaaagttatctGTATGAACTGAGCGGTTTAAATTAAGACTTCTGAAGAAACACAGTCAGTTTATATAAAAGATTTaactttgaataaaacattgacAATAGCCTAAAGCTACATAATAAACTTATGCATCAAGTAAGCATGTTTGTTACTTTCCCTTTAAGACTAAAACAAATTTGGATAGAAAATAACTGCTAATACTTAACTAGAATTATTGAAGGTTGTTTCAATGAGACTTATAACATCATTATATGTTTTATGAAAGTTATGACATCCTTCACTGTAAAGAGCCATCAGCAATTTCCTGTATCAGCGTCAAGATATACTGTATAACTAAATCACTGTCGAGTTTAagatttattcaataaagagaGGCAGCAGCA

Function

symbol description
aifm2 Predicted to enable oxidoreductase activity. Orthologous to human AIFM2 (apoptosis inducing factor mitochondria associated 2).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function

KEGG:

id description
K22745 AIFM2; apoptosis-inducing factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255962.1 True 2755 mRNA 0.41 9 4957649 4962720

Neighbor

gene id symbol gene type direction distance location
gins1 gins1,LOC107708421,LOC107727378 coding upstream 25939 4929198 ~ 4931710 (+)
pitx3 pitx3,LOC107699310,LOC107678606,LOC107582478,LOC107708419,LOC107589551 coding upstream 40494 4905566 ~ 4917155 (+)
LOC122356972 h2afy2,LOC107699309,LOC107589552,LOC107708416,LOC105010730 coding upstream 120917 4829737 ~ 4836732 (+)
si:ch211-250c4.3 LOC107699306,LOC107589555,LOC107727387,LOC107708411,LOC107678604,LOC100535981 coding upstream 288633 4643112 ~ 4669016 (+)
atl2 atl2,LOC107586488,LOC107699303,LOC107589558,LOC107708410,LOC107727384,LOC107678587 coding upstream 334850 4612642 ~ 4622799 (+)
LOC122356724 LOC107699313,LOC107582481,LOC107727371,LOC107678550 coding downstream 5453 4968173 ~ 4988224 (+)
cpxm1a cpxm1a,LOC107708467,LOC107678553,LOC107567841 coding downstream 92433 5055153 ~ 5063464 (+)
grxcr1b grxcr1,LOC107690195,LOC107733694,LOC107708472 coding downstream 112209 5074929 ~ 5076519 (+)
si:dkey-33c12.4 LOC107690151,LOC107733685,LOC107582527,LOC107708477,LOC107567855,LOC107678591 coding downstream 135854 5098574 ~ 5105932 (+)
LOC122356713 LOC107567852,LOC107678576,LOC107708478 coding downstream 156110 5118830 ~ 5125392 (+)
G90700 NA non-coding upstream 485905 4471065 ~ 4471744 (+)
G90659 socs5b,socs5,LOC107727375,LOC107586485,LOC107699300,LOC107708402 non-coding upstream 491781 4459639 ~ 4465868 (+)
LOC122357002 NA non-coding upstream 711859 4244608 ~ 4245790 (+)
LOC122356176 NA non-coding upstream 815147 4137317 ~ 4142502 (+)
G90650 NA non-coding upstream 852178 4105247 ~ 4105471 (+)
G90888 NA non-coding downstream 1982 4964702 ~ 4965015 (+)
G90879 LOC107733683,LOC107690158,LOC107582524,LOC107678493,LOC107708465 non-coding downstream 40690 5003410 ~ 5013662 (+)
G90905 NA non-coding downstream 72639 5035359 ~ 5036116 (+)
G90957 NA non-coding downstream 434775 5397495 ~ 5435571 (+)
G90985 NA non-coding downstream 538922 5501642 ~ 5505510 (+)
si:ch211-250c4.5 LOC107727386,LOC107699305,LOC107586489,LOC107708409,LOC107678597 other upstream 261807 4561648 ~ 4695842 (+)
G90660 epcam,LOC107699293,LOC107727368,LOC107586477,LOC107707148,LOC107678540,LOC107707150,LOC108422531,LOC107723711 other upstream 603718 4182499 ~ 4353931 (+)
pkdcca pkdcca,LOC107669579,LOC107739483,LOC107718010,LOC107695038,LOC107590011,LOC107586469 other upstream 1125099 3809053 ~ 3832550 (+)
prkn park2,LOC107739476,LOC107669573,LOC107696378 other upstream 1243886 3620406 ~ 3713763 (+)
G90377 NA other upstream 1507632 3449401 ~ 3450017 (+)
si:ch73-49p17.1 LOC107678601,LOC107727381,LOC107589548,LOC107708422 other downstream 29433 4992153 ~ 4997991 (+)
rab11fip5a LOC107733767,LOC107690145,LOC107582533 other downstream 214998 5177718 ~ 5198404 (+)
ap5s1 ap5s1,LOC107693289,LOC107678575,LOC107718444,LOC107567857,LOC107582535,LOC107733789 other downstream 298316 5261036 ~ 5271247 (+)
lamtor3 lamtor3 other downstream 988497 5951217 ~ 5952517 (+)
commd8 commd8,LOC107666485,LOC107556927,LOC107733703,LOC107585230 other downstream 1019798 5982518 ~ 5986979 (+)

Expression


Co-expression Network